RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 CCDC188H7C350 402 aa13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 RTN2O75298 545 aa13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 OR1G1P47890 313 aa13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 SNRPFP62306 86 aaKnown RBP13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 TREML2Q5T2D2 321 aa13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 RBM43Q6ZSC3 357 aaKnown RBP13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 TAF1DQ9H5J8 278 aaPredicted RBP13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 CHORDC1Q9UHD1 332 aaPredicted RBP13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 PCDHB2Q9Y5E7 798 aa13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 KCNJ6P48051 423 aa13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 NIPA1Q7RTP0 329 aa13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 PPP1R13LQ8WUF5 828 aa13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 MTMR12Q9C0I1 747 aa13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 NIF3L1Q9GZT8 377 aa13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 DHX35Q9H5Z1 703 aaKnown RBP13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 NFU1Q9UMS0 254 aa13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 CD4P01730 458 aa13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 ATP1A1P05023 1023 aaKnown RBP13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 CYP3A4P08684 503 aa13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 UBA1P22314 1058 aaKnown RBP13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 SLCO1A2P46721 670 aa13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 ACVR2BQ13705 512 aa13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 CHADLQ6NUI6 762 aa13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 BTNL9Q6UXG8 535 aa13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 DLK2Q6UY11 383 aa13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 CPB2Q96IY4 423 aa13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 CCDC68Q9H2F9 335 aa13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 IP6K2Q9UHH9 426 aa13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 GRAP2O75791 330 aa13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 XPAP23025 273 aaPredicted RBP13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 PDE1BQ01064 536 aa13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 LAMTOR4Q0VGL1 99 aa13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 TRIM65Q6PJ69 517 aa13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 REPS2Q8NFH8 660 aa13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 CDKL2Q92772 493 aa13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 VTA1Q9NP79 307 aa13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 PARVAQ9NVD7 372 aa13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 TTC7AQ9ULT0 858 aaPredicted RBP13.94□□□□□ -0.18
PTPRN2-202ENST00000389416 ZNF142P52746 1687 aaPredicted RBP13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 CPP00450 1065 aa13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 INHBAP08476 426 aa13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 ITGB5P18084 799 aa13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 PRAMEF19Q5SWL8 479 aa13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 FYB2Q5VWT5 728 aa13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 TLK2Q86UE8 772 aa13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 CCDC60Q8IWA6 550 aaPredicted RBP13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 FMO2Q99518 471 aa13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 NT5C1AQ9BXI3 368 aa13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 OLFML3Q9NRN5 406 aa13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 DBR1Q9UK59 544 aaKnown RBP13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 TFR2Q9UP52 801 aa13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 TOPAZ1Q8N9V7 1692 aa13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 CCDC151A5D8V7 595 aa13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 WNT7AO00755 349 aa13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 PEX10O60683 326 aa13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 GJC2Q5T442 439 aaPredicted RBP13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 RHOT1Q8IXI2 618 aa13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 UPF1Q92900 1129 aaKnown RBP eCLIP13.93□□□□□ -0.185e-12■■■□□ 16.8
PTPRN2-202ENST00000389416 ATP9AO75110 1047 aa13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 B3GAT3O94766 335 aa13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 PLEKP08567 350 aaPredicted RBP13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 AMHR2Q16671 573 aa13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 PCSK9Q8NBP7 692 aaKnown RBP13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 FUCA2Q9BTY2 467 aa13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 PI4K2BG5E9Z4 385 aa13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 PPFIA4O75335 1185 aa13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 FGFR4P22455 802 aa13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 GRIK1P39086 918 aa13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 CDH6P55285 790 aa13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 TMEM119Q4V9L6 283 aa13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 RGMBQ6NW40 437 aa13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 MPZL3Q6UWV2 235 aa13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 TACC3Q9Y6A5 838 aa13.93□□□□□ -0.18
PTPRN2-202ENST00000389416 ESYT3A0FGR9 886 aa13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 FOXN3O00409 490 aaPredicted RBP13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 KRT7P08729 469 aa13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 PDGFRAP16234 1089 aa13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 GTF2H1P32780 548 aa13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 BEX3Q00994 111 aa13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 NAA30Q147X3 362 aaPredicted RBP13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 GRIK4Q16099 956 aa13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 BTBD8Q5XKL5 378 aa13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 PDIK1LQ8N165 341 aa13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 SLC35G2Q8TBE7 412 aa13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 RAB3IL1Q8TBN0 382 aa13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 DNAJB3Q8WWF6 145 aa13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 NCAPGQ9BPX3 1015 aa13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 DNAJC18Q9H819 358 aa13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 SLC38A7Q9NVC3 462 aa13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 KLHL11Q9NVR0 708 aa13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 I3L4J1 428 aa13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 P4HA2O15460 535 aa13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 ATMINO43313 823 aaPredicted RBP13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 PAN2Q504Q3 1202 aaKnown RBP13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 SPATA2LQ8IUW3 424 aaPredicted RBP13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 ARRDC4Q8NCT1 418 aa13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 KCNMB3Q9NPA1 279 aa13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 STARD7Q9NQZ5 370 aa13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 TBK1Q9UHD2 729 aa13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 RIPK3Q9Y572 518 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 228.3 ms