RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 MYH13Q9UKX3 1938 aa8.9□□□□□ -0.98
VPS36-201ENST00000378060 SERPINB4P48594 390 aa8.9□□□□□ -0.98
VPS36-201ENST00000378060 KRT17Q04695 432 aa8.9□□□□□ -0.98
VPS36-201ENST00000378060 ZBTB17Q13105 803 aa8.9□□□□□ -0.98
VPS36-201ENST00000378060 NCAPHQ15003 741 aa8.9□□□□□ -0.98
VPS36-201ENST00000378060 MAPK6Q16659 721 aa8.9□□□□□ -0.98
VPS36-201ENST00000378060 TEDDM1Q5T9Z0 273 aa8.9□□□□□ -0.98
VPS36-201ENST00000378060 PAPD7Q5XG87 772 aaKnown RBP8.9□□□□□ -0.98
VPS36-201ENST00000378060 KLC3Q6P597 504 aa8.9□□□□□ -0.98
VPS36-201ENST00000378060 RSBN1LQ6PCB5 846 aaPredicted RBP8.9□□□□□ -0.98
VPS36-201ENST00000378060 HAUS6Q7Z4H7 955 aa8.9□□□□□ -0.98
VPS36-201ENST00000378060 TRIML2Q8N7C3 387 aa8.9□□□□□ -0.98
VPS36-201ENST00000378060 SEC16BQ96JE7 1060 aa8.9□□□□□ -0.98
VPS36-201ENST00000378060 EPB41L4AQ9HCS5 686 aaPredicted RBP8.9□□□□□ -0.98
VPS36-201ENST00000378060 IRS2Q9Y4H2 1338 aa8.9□□□□□ -0.98
VPS36-201ENST00000378060 TRPA1O75762 1119 aa8.9□□□□□ -0.99
VPS36-201ENST00000378060 ZNF189O75820 626 aaPredicted RBP8.9□□□□□ -0.99
VPS36-201ENST00000378060 FXR2P51116 673 aaKnown RBP eCLIP8.9□□□□□ -0.99
VPS36-201ENST00000378060 RAD23BP54727 409 aa8.9□□□□□ -0.99
VPS36-201ENST00000378060 TGFB2P61812 414 aa8.9□□□□□ -0.99
VPS36-201ENST00000378060 ZNF543Q08ER8 600 aa8.9□□□□□ -0.99
VPS36-201ENST00000378060 PDIA2Q13087 525 aaKnown RBP8.9□□□□□ -0.99
VPS36-201ENST00000378060 LRRC14Q15048 493 aa8.9□□□□□ -0.99
VPS36-201ENST00000378060 GRIK5Q16478 980 aa8.9□□□□□ -0.99
VPS36-201ENST00000378060 ARL13BQ3SXY8 428 aa8.9□□□□□ -0.99
VPS36-201ENST00000378060 C1orf146Q5VVC0 180 aa8.9□□□□□ -0.99
VPS36-201ENST00000378060 GADL1Q6ZQY3 521 aa8.9□□□□□ -0.99
VPS36-201ENST00000378060 ZBTB33Q86T24 672 aa8.9□□□□□ -0.99
VPS36-201ENST00000378060 SLC35G2Q8TBE7 412 aa8.9□□□□□ -0.99
VPS36-201ENST00000378060 THOC1Q96FV9 657 aaKnown RBP8.9□□□□□ -0.99
VPS36-201ENST00000378060 ERP44Q9BS26 406 aa8.9□□□□□ -0.99
VPS36-201ENST00000378060 GCOM2Q9BZD3 368 aaPredicted RBP8.9□□□□□ -0.99
VPS36-201ENST00000378060 CARD9Q9H257 536 aa8.9□□□□□ -0.99
VPS36-201ENST00000378060 MLXIPLQ9NP71 852 aa8.9□□□□□ -0.99
VPS36-201ENST00000378060 MTMR4Q9NYA4 1195 aa8.9□□□□□ -0.99
VPS36-201ENST00000378060 DONSONQ9NYP3 566 aa8.9□□□□□ -0.99
VPS36-201ENST00000378060 TTC7AQ9ULT0 858 aaPredicted RBP8.9□□□□□ -0.99
VPS36-201ENST00000378060 TRIM33Q9UPN9 1127 aa8.9□□□□□ -0.99
VPS36-201ENST00000378060 SCN9AQ15858 1988 aa8.9□□□□□ -0.99
VPS36-201ENST00000378060 TCP11X1B4DZS4 312 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 RAD51CO43502 376 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 SCP2P22307 547 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 FMO5P49326 533 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 TROAPQ12815 778 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 CEP55Q53EZ4 464 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 RSRC2Q7L4I2 434 aaKnown RBP8.89□□□□□ -0.99
VPS36-201ENST00000378060 MCUQ8NE86 351 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 CCDC138Q96M89 665 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 CYTH2Q99418 400 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 FAM213AQ9BRX8 229 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 LXNQ9BS40 222 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 WWP1Q9H0M0 922 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 PARVAQ9NVD7 372 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 DCTN4Q9UJW0 460 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 CCDC88AQ3V6T2 1871 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 WDR46O15213 610 aaKnown RBP8.89□□□□□ -0.99
VPS36-201ENST00000378060 CFLARO15519 480 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 S100BP04271 92 aaPredicted RBP8.89□□□□□ -0.99
VPS36-201ENST00000378060 CHN1P15882 459 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 GNA15P30679 374 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 PHEXP78562 749 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 PTGISQ16647 500 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 ACAD11Q709F0 780 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 ANO5Q75V66 913 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 SESTD1Q86VW0 696 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 SIX6OS1Q8N1H7 587 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 PPM1NQ8N819 430 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 DAGLBQ8NCG7 672 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 CYFIP2Q96F07 1278 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 OLFM3Q96PB7 478 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 NDE1Q9NXR1 346 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 ORC6Q9Y5N6 252 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 UBE4BO95155 1302 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 MYO3BQ8WXR4 1341 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 SNED1Q8TER0 1413 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 RASSF10A6NK89 507 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 STXBP3O00186 592 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 LPXNO60711 386 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 PYGBP11216 843 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 TNFAIP2Q03169 654 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 KDM7AQ6ZMT4 941 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 NUDCD3Q8IVD9 361 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 ZBED8Q8IZ13 594 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 C1orf54Q8WWF1 131 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 HSPH1Q92598 858 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 HPS3Q969F9 1004 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 PNKPQ96T60 521 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 SLC9A2Q9UBY0 812 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 TTC36A6NLP5 189 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 CCT8L1PA6NM43 557 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 NFKBIEO00221 500 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 P4HA2O15460 535 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 ASAP2O43150 1006 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 AP5Z1O43299 807 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 TAC1P20366 129 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 KLRC1P26715 233 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 STAT3P40763 770 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 ZNF699Q32M78 642 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 CDKAL1Q5VV42 579 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 FBXW10Q5XX13 1052 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms