RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 TAS1R2Q8TE23 839 aa19.38■□□□□ 0.69
CD40-201ENST00000372276 UBLCP1Q8WVY7 318 aaPredicted RBP19.38■□□□□ 0.69
CD40-201ENST00000372276 PSPC1Q8WXF1 523 aaKnown RBP19.38■□□□□ 0.69
CD40-201ENST00000372276 BSNDQ8WZ55 320 aa19.38■□□□□ 0.69
CD40-201ENST00000372276 MAGOHBQ96A72 148 aaKnown RBP19.38■□□□□ 0.69
CD40-201ENST00000372276 NIFKQ9BYG3 293 aaKnown RBP19.38■□□□□ 0.69
CD40-201ENST00000372276 A1CFQ9NQ94 594 aaKnown RBP19.38■□□□□ 0.69
CD40-201ENST00000372276 XPNPEP1Q9NQW7 623 aa19.38■□□□□ 0.69
CD40-201ENST00000372276 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.38■□□□□ 0.69
CD40-201ENST00000372276 MAFBQ9Y5Q3 323 aaPredicted RBP19.38■□□□□ 0.69
CD40-201ENST00000372276 MYH9P35579 1960 aaKnown RBP19.38■□□□□ 0.69
CD40-201ENST00000372276 UTRNP46939 3433 aa19.38■□□□□ 0.69
CD40-201ENST00000372276 RGS20O76081 388 aa19.37■□□□□ 0.69
CD40-201ENST00000372276 EGFRP00533 1210 aa19.37■□□□□ 0.69
CD40-201ENST00000372276 MMEP08473 750 aa19.37■□□□□ 0.69
CD40-201ENST00000372276 POLGP54098 1239 aaPredicted RBP19.37■□□□□ 0.69
CD40-201ENST00000372276 DHX9Q08211 1270 aaKnown RBP19.37■□□□□ 0.69
CD40-201ENST00000372276 EMC2Q15006 297 aa19.37■□□□□ 0.69
CD40-201ENST00000372276 TRADDQ15628 312 aa19.37■□□□□ 0.69
CD40-201ENST00000372276 PTPROQ16827 1216 aa19.37■□□□□ 0.69
CD40-201ENST00000372276 DDX1Q92499 740 aaKnown RBP19.37■□□□□ 0.69
CD40-201ENST00000372276 KAT5Q92993 513 aa19.37■□□□□ 0.69
CD40-201ENST00000372276 KLRG1Q96E93 195 aa19.37■□□□□ 0.69
CD40-201ENST00000372276 VCPIP1Q96JH7 1222 aa19.37■□□□□ 0.69
CD40-201ENST00000372276 TMEM134Q9H6X4 195 aa19.37■□□□□ 0.69
CD40-201ENST00000372276 ZNF302Q9NR11 478 aa19.37■□□□□ 0.69
CD40-201ENST00000372276 HOMER3Q9NSC5 361 aa19.37■□□□□ 0.69
CD40-201ENST00000372276 NRBP2Q9NSY0 501 aa19.37■□□□□ 0.69
CD40-201ENST00000372276 GJA3Q9Y6H8 435 aa19.37■□□□□ 0.69
CD40-201ENST00000372276 GRIN2DO15399 1336 aa19.37■□□□□ 0.69
CD40-201ENST00000372276 NUDT17P0C025 328 aa19.36■□□□□ 0.69
CD40-201ENST00000372276 TBXAS1P24557 533 aaPredicted RBP19.36■□□□□ 0.69
CD40-201ENST00000372276 MDH1P40925 334 aaKnown RBP19.36■□□□□ 0.69
CD40-201ENST00000372276 ZNF844Q08AG5 666 aa19.36■□□□□ 0.69
CD40-201ENST00000372276 SLMAPQ14BN4 828 aa19.36■□□□□ 0.69
CD40-201ENST00000372276 UAP1Q16222 522 aaPredicted RBP19.36■□□□□ 0.69
CD40-201ENST00000372276 ZACNQ401N2 412 aa19.36■□□□□ 0.69
CD40-201ENST00000372276 DDX42Q86XP3 938 aaKnown RBP eCLIP19.36■□□□□ 0.69
CD40-201ENST00000372276 SLC13A5Q86YT5 568 aaPredicted RBP19.36■□□□□ 0.69
CD40-201ENST00000372276 ZSWIM2Q8NEG5 633 aa19.36■□□□□ 0.69
CD40-201ENST00000372276 SLCO2A1Q92959 643 aa19.36■□□□□ 0.69
CD40-201ENST00000372276 CEP89Q96ST8 783 aa19.36■□□□□ 0.69
CD40-201ENST00000372276 SH2D3AQ9BRG2 576 aa19.36■□□□□ 0.69
CD40-201ENST00000372276 FAM213AQ9BRX8 229 aa19.36■□□□□ 0.69
CD40-201ENST00000372276 TXLNGYQ9BZA5 131 aa19.36■□□□□ 0.69
CD40-201ENST00000372276 EPN3Q9H201 632 aa19.36■□□□□ 0.69
CD40-201ENST00000372276 PORCNQ9H237 461 aa19.36■□□□□ 0.69
CD40-201ENST00000372276 PLEKHA4Q9H4M7 779 aa19.36■□□□□ 0.69
CD40-201ENST00000372276 CNOT10Q9H9A5 744 aaKnown RBP19.36■□□□□ 0.69
CD40-201ENST00000372276 GGA2Q9UJY4 613 aa19.36■□□□□ 0.69
CD40-201ENST00000372276 PASKQ96RG2 1323 aa19.36■□□□□ 0.69
CD40-201ENST00000372276 MYO1CO00159 1063 aa19.36■□□□□ 0.69
CD40-201ENST00000372276 OATP04181 439 aa19.36■□□□□ 0.69
CD40-201ENST00000372276 DLATP10515 647 aaKnown RBP19.36■□□□□ 0.69
CD40-201ENST00000372276 PTGIRP43119 386 aa19.36■□□□□ 0.69
CD40-201ENST00000372276 PTP4A2Q12974 167 aa19.36■□□□□ 0.69
CD40-201ENST00000372276 DGKZQ13574 1117 aa19.36■□□□□ 0.69
CD40-201ENST00000372276 LIN9Q5TKA1 542 aa19.36■□□□□ 0.69
CD40-201ENST00000372276 CCDC60Q8IWA6 550 aaPredicted RBP19.36■□□□□ 0.69
CD40-201ENST00000372276 DEPTORQ8TB45 409 aa19.36■□□□□ 0.69
CD40-201ENST00000372276 SLC7A3Q8WY07 619 aa19.36■□□□□ 0.69
CD40-201ENST00000372276 ZKSCAN4Q969J2 545 aaPredicted RBP19.36■□□□□ 0.69
CD40-201ENST00000372276 ZBTB9Q96C00 473 aa19.36■□□□□ 0.69
CD40-201ENST00000372276 MPHOSPH6Q99547 160 aaKnown RBP19.36■□□□□ 0.69
CD40-201ENST00000372276 DHX33Q9H6R0 707 aaKnown RBP19.36■□□□□ 0.69
CD40-201ENST00000372276 ZDHHC18Q9NUE0 388 aa19.36■□□□□ 0.69
CD40-201ENST00000372276 CNOT8Q9UFF9 292 aaKnown RBP19.36■□□□□ 0.69
CD40-201ENST00000372276 AGO2Q9UKV8 859 aaKnown RBP19.36■□□□□ 0.69
CD40-201ENST00000372276 KRT5P13647 590 aa19.35■□□□□ 0.69
CD40-201ENST00000372276 IFFO1Q0D2I5 559 aa19.35■□□□□ 0.69
CD40-201ENST00000372276 GRM1Q13255 1194 aa19.35■□□□□ 0.69
CD40-201ENST00000372276 FAM160B1Q5W0V3 765 aa19.35■□□□□ 0.69
CD40-201ENST00000372276 KCTD16Q68DU8 428 aa19.35■□□□□ 0.69
CD40-201ENST00000372276 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.35■□□□□ 0.69
CD40-201ENST00000372276 PRELID2Q8N945 189 aa19.35■□□□□ 0.69
CD40-201ENST00000372276 ATP8B4Q8TF62 1192 aa19.35■□□□□ 0.69
CD40-201ENST00000372276 PAGR1Q9BTK6 254 aa19.35■□□□□ 0.69
CD40-201ENST00000372276 KIFC3Q9BVG8 833 aa19.35■□□□□ 0.69
CD40-201ENST00000372276 CELF4Q9BZC1 486 aaKnown RBP19.35■□□□□ 0.69
CD40-201ENST00000372276 STMN4Q9H169 189 aaPredicted RBP19.35■□□□□ 0.69
CD40-201ENST00000372276 NEUROG2Q9H2A3 272 aa19.35■□□□□ 0.69
CD40-201ENST00000372276 DPH5Q9H2P9 285 aa19.35■□□□□ 0.69
CD40-201ENST00000372276 PABPC3Q9H361 631 aaKnown RBP19.35■□□□□ 0.69
CD40-201ENST00000372276 LRRC19Q9H756 370 aa19.35■□□□□ 0.69
CD40-201ENST00000372276 AFG3L2Q9Y4W6 797 aa19.35■□□□□ 0.69
CD40-201ENST00000372276 TMEM110-MUSTN1A8MSY1 372 aa19.34■□□□□ 0.69
CD40-201ENST00000372276 K7ERI5 159 aa19.34■□□□□ 0.69
CD40-201ENST00000372276 TGFB3P10600 412 aa19.34■□□□□ 0.69
CD40-201ENST00000372276 UNGP13051 313 aaPredicted RBP19.34■□□□□ 0.69
CD40-201ENST00000372276 LSP1P33241 339 aa19.34■□□□□ 0.69
CD40-201ENST00000372276 ARL2P36404 184 aa19.34■□□□□ 0.69
CD40-201ENST00000372276 CORO7P57737 925 aa19.34■□□□□ 0.69
CD40-201ENST00000372276 ZNF211Q13398 564 aaPredicted RBP19.34■□□□□ 0.69
CD40-201ENST00000372276 NEDD9Q14511 834 aa19.34■□□□□ 0.69
CD40-201ENST00000372276 ANGEL2Q5VTE6 544 aaKnown RBP19.34■□□□□ 0.69
CD40-201ENST00000372276 CCDC137Q6PK04 289 aaKnown RBP19.34■□□□□ 0.69
CD40-201ENST00000372276 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.34■□□□□ 0.69
CD40-201ENST00000372276 ARMC9Q7Z3E5 817 aa19.34■□□□□ 0.69
CD40-201ENST00000372276 GRK7Q8WTQ7 553 aa19.34■□□□□ 0.69
CD40-201ENST00000372276 WNK4Q96J92 1243 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms