RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 CDH6P55285 790 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 CUL1Q13616 776 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 FRMD5Q7Z6J6 570 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 TADA2BQ86TJ2 420 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 KIF2BQ8N4N8 673 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 UBA3Q8TBC4 463 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 UNC45AQ9H3U1 944 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 DHX35Q9H5Z1 703 aaKnown RBP9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 SMYD3Q9H7B4 428 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 GMNCA6NCL1 334 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 FAM86B1E9PN63 330 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 GJB6O95452 261 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 SGPL1O95470 568 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 FAM86B2P0C5J1 330 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 TXNP10599 105 aaKnown RBP9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 ARL4AP40617 200 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 GMPSP49915 693 aaPredicted RBP9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 ARSEP51690 589 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 SESN2P58004 480 aaPredicted RBP9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 NLRP14Q86W24 1093 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 ATP6V1G3Q96LB4 118 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 DUSP9Q99956 384 aaKnown RBP9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 VPS11Q9H270 941 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 HOXC10Q9NYD6 342 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 NYAP2Q9P242 653 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 PPARGC1AQ9UBK2 798 aaKnown RBP9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 ZNRF3Q9ULT6 936 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 SNX9Q9Y5X1 595 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 UBR3Q6ZT12 1888 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 EML1O00423 815 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 OPHN1O60890 802 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 PIAS1O75925 651 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 GLI1P08151 1106 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 GCKP35557 465 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 CASP5P51878 434 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 ATXN3P54252 364 aaPredicted RBP9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 PPP2R2AP63151 447 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 TMPRSS15P98073 1019 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 LMNTD2Q8IXW0 634 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 SIX6OS1Q8N1H7 587 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 PNMA5Q96PV4 448 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 PRMT1Q99873 361 aaKnown RBP9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 DDX23Q9BUQ8 820 aaKnown RBP9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 GLIS2Q9BZE0 524 aaPredicted RBP9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 SPC25Q9HBM1 224 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 KCNG1Q9UIX4 513 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 TPX2Q9ULW0 747 aaKnown RBP9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 SALL1Q9NSC2 1324 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 TCP11X1B4DZS4 312 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 ADAMTS3O15072 1205 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 LCP1P13796 627 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 PON1P27169 355 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 JAK3P52333 1124 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 PPP4CP60510 307 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 SARNPP82979 210 aaKnown RBP9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 PRKCEQ02156 737 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 SLC29A2Q14542 456 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 IL17AQ16552 155 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 CDKAL1Q5VV42 579 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 FOXR1Q6PIV2 292 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 ZNF571Q7Z3V5 609 aaPredicted RBP9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 RNF135Q8IUD6 432 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 EFCAB13Q8IY85 973 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 KAT5Q92993 513 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 CCDC124Q96CT7 223 aaKnown RBP9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 MCEEQ96PE7 176 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 FAM193BQ96PV7 902 aaPredicted RBP9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 ACAD9Q9H845 621 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 AGPAT3Q9NRZ7 376 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 HERC5Q9UII4 1024 aaKnown RBP9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 EP400Q96L91 3159 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 MYL3P08590 195 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 CYP2C19P33261 490 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 IRAK1P51617 712 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 EPHB1P54762 984 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 TSNAXIP1Q2TAA8 658 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 NBPF12Q5TAG4 269 aaPredicted RBP9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 RC3H1Q5TC82 1133 aaKnown RBP9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 DSTYKQ6XUX3 929 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 GPD1LQ8N335 351 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 C18orf8Q96DM3 657 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 CYFIP2Q96F07 1278 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 CYP4F11Q9HBI6 524 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 AGAP1Q9UPQ3 857 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 SYNGAP1Q96PV0 1343 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 RCCD1A6NED2 376 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 GPC4O75487 556 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 GIT2Q14161 759 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 KIAA1755Q5JYT7 1200 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 C6orf118Q5T5N4 469 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 AADACL2Q6P093 401 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 CENPUQ71F23 418 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 EPM2AIP1Q7L775 607 aaPredicted RBP9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 SPATA24Q86W54 205 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 NSMCE1Q8WV22 266 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 HDAC11Q96DB2 347 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 KIF12Q96FN5 646 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 CFAP57Q96MR6 1250 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms