RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 SMARCA1P28370 1054 aa16.83■□□□□ 0.29
COL17A1-202ENST00000369733 RIBC1Q8N443 379 aaPredicted RBP16.83■□□□□ 0.29
COL17A1-202ENST00000369733 CARD9Q9H257 536 aa16.83■□□□□ 0.29
COL17A1-202ENST00000369733 PPCSQ9HAB8 311 aa16.83■□□□□ 0.29
COL17A1-202ENST00000369733 TUFT1Q9NNX1 390 aa16.83■□□□□ 0.29
COL17A1-202ENST00000369733 B2RBV5 119 aa16.83■□□□□ 0.29
COL17A1-202ENST00000369733 ATP6V1G2O95670 118 aa16.83■□□□□ 0.29
COL17A1-202ENST00000369733 TTI2Q6NXR4 508 aa16.83■□□□□ 0.29
COL17A1-202ENST00000369733 GPD1LQ8N335 351 aa16.83■□□□□ 0.29
COL17A1-202ENST00000369733 MTBPQ96DY7 904 aa16.83■□□□□ 0.29
COL17A1-202ENST00000369733 TMEM117Q9H0C3 514 aa16.83■□□□□ 0.29
COL17A1-202ENST00000369733 DDX20Q9UHI6 824 aaKnown RBP16.83■□□□□ 0.29
COL17A1-202ENST00000369733 L3MBTL1Q9Y468 752 aa16.83■□□□□ 0.29
COL17A1-202ENST00000369733 OVOS2A0A0G2JMS6 1433 aa16.83■□□□□ 0.29
COL17A1-202ENST00000369733 MAPK7Q13164 816 aa16.83■□□□□ 0.28
COL17A1-202ENST00000369733 DNAJC3Q13217 504 aa16.83■□□□□ 0.28
COL17A1-202ENST00000369733 EFTUD2Q15029 972 aaKnown RBP eCLIP16.83■□□□□ 0.28
COL17A1-202ENST00000369733 GIPC2Q8TF65 315 aa16.83■□□□□ 0.28
COL17A1-202ENST00000369733 CPA5Q8WXQ8 436 aa16.83■□□□□ 0.28
COL17A1-202ENST00000369733 CD209Q9NNX6 404 aa16.83■□□□□ 0.28
COL17A1-202ENST00000369733 CHEK2O96017 543 aa16.83■□□□□ 0.28
COL17A1-202ENST00000369733 CSF1RP07333 972 aa16.83■□□□□ 0.28
COL17A1-202ENST00000369733 AARSP49588 968 aaKnown RBP eCLIP16.83■□□□□ 0.28
COL17A1-202ENST00000369733 BCAR1P56945 870 aa16.83■□□□□ 0.28
COL17A1-202ENST00000369733 SBK1Q52WX2 424 aa16.83■□□□□ 0.28
COL17A1-202ENST00000369733 SLC27A3Q5K4L6 730 aa16.83■□□□□ 0.28
COL17A1-202ENST00000369733 KIRREL3Q8IZU9 778 aa16.83■□□□□ 0.28
COL17A1-202ENST00000369733 TEKT4Q8WW24 435 aa16.83■□□□□ 0.28
COL17A1-202ENST00000369733 NSL1Q96IY1 281 aa16.83■□□□□ 0.28
COL17A1-202ENST00000369733 VPS39Q96JC1 886 aa16.83■□□□□ 0.28
COL17A1-202ENST00000369733 MARCOQ9UEW3 520 aaPredicted RBP16.83■□□□□ 0.28
COL17A1-202ENST00000369733 NPHP4O75161 1426 aaPredicted RBP16.83■□□□□ 0.28
COL17A1-202ENST00000369733 FAM196BA6NMK8 535 aa16.83■□□□□ 0.28
COL17A1-202ENST00000369733 OSBPP22059 807 aa16.83■□□□□ 0.28
COL17A1-202ENST00000369733 TYK2P29597 1187 aa16.83■□□□□ 0.28
COL17A1-202ENST00000369733 EIF3EP60228 445 aaKnown RBP16.83■□□□□ 0.28
COL17A1-202ENST00000369733 YWHAHQ04917 246 aaPredicted RBP16.83■□□□□ 0.28
COL17A1-202ENST00000369733 GJB7Q6PEY0 223 aa16.83■□□□□ 0.28
COL17A1-202ENST00000369733 C1orf228Q6PIY5 440 aa16.83■□□□□ 0.28
COL17A1-202ENST00000369733 GFM2Q969S9 779 aaKnown RBP16.83■□□□□ 0.28
COL17A1-202ENST00000369733 FAM118BQ9BPY3 351 aa16.83■□□□□ 0.28
COL17A1-202ENST00000369733 FOXP3Q9BZS1 431 aa16.83■□□□□ 0.28
COL17A1-202ENST00000369733 SPC25Q9HBM1 224 aa16.83■□□□□ 0.28
COL17A1-202ENST00000369733 NAGPAQ9UK23 515 aa16.83■□□□□ 0.28
COL17A1-202ENST00000369733 OVOS2A0A0J9YW53 1432 aa16.82■□□□□ 0.28
COL17A1-202ENST00000369733 OVOS2Q6IE36 1432 aa16.82■□□□□ 0.28
COL17A1-202ENST00000369733 ATMINO43313 823 aaPredicted RBP16.82■□□□□ 0.28
COL17A1-202ENST00000369733 AKR1B1P15121 316 aa16.82■□□□□ 0.28
COL17A1-202ENST00000369733 FAM196AQ6ZSG2 479 aa16.82■□□□□ 0.28
COL17A1-202ENST00000369733 TAP1Q03518 808 aa16.82■□□□□ 0.28
COL17A1-202ENST00000369733 SMAD1Q15797 465 aaKnown RBP16.82■□□□□ 0.28
COL17A1-202ENST00000369733 AGR3Q8TD06 166 aa16.82■□□□□ 0.28
COL17A1-202ENST00000369733 PACSIN1Q9BY11 444 aa16.82■□□□□ 0.28
COL17A1-202ENST00000369733 EIF2AQ9BY44 585 aaKnown RBP16.82■□□□□ 0.28
COL17A1-202ENST00000369733 HSPBP1Q9NZL4 362 aa16.82■□□□□ 0.28
COL17A1-202ENST00000369733 CSADQ9Y600 493 aa16.82■□□□□ 0.28
COL17A1-202ENST00000369733 FXR2P51116 673 aaKnown RBP eCLIP16.82■□□□□ 0.28
COL17A1-202ENST00000369733 HEATR6Q6AI08 1181 aaKnown RBP16.82■□□□□ 0.28
COL17A1-202ENST00000369733 MIGA2Q7L4E1 593 aa16.82■□□□□ 0.28
COL17A1-202ENST00000369733 KIFC3Q9BVG8 833 aa16.82■□□□□ 0.28
COL17A1-202ENST00000369733 STK32BQ9NY57 414 aa16.82■□□□□ 0.28
COL17A1-202ENST00000369733 GADL1Q6ZQY3 521 aa16.82■□□□□ 0.28
COL17A1-202ENST00000369733 ZBTB10Q96DT7 871 aa16.82■□□□□ 0.28
COL17A1-202ENST00000369733 MOV10L1Q9BXT6 1211 aaKnown RBP16.82■□□□□ 0.28
COL17A1-202ENST00000369733 SUN2Q9UH99 717 aa16.82■□□□□ 0.28
COL17A1-202ENST00000369733 TFRCP02786 760 aaKnown RBP16.81■□□□□ 0.28
COL17A1-202ENST00000369733 PDIA6Q15084 440 aa16.81■□□□□ 0.28
COL17A1-202ENST00000369733 ILDR1Q86SU0 546 aaPredicted RBP16.81■□□□□ 0.28
COL17A1-202ENST00000369733 ACTRT1Q8TDG2 376 aa16.81■□□□□ 0.28
COL17A1-202ENST00000369733 SKA2Q8WVK7 121 aaPredicted RBP16.81■□□□□ 0.28
COL17A1-202ENST00000369733 ARHGAP20Q9P2F6 1191 aa16.81■□□□□ 0.28
COL17A1-202ENST00000369733 M0QYV0 167 aa16.81■□□□□ 0.28
COL17A1-202ENST00000369733 ACADSP16219 412 aa16.81■□□□□ 0.28
COL17A1-202ENST00000369733 EPHA7Q15375 998 aa16.81■□□□□ 0.28
COL17A1-202ENST00000369733 CDKL3Q8IVW4 592 aaPredicted RBP16.81■□□□□ 0.28
COL17A1-202ENST00000369733 AENQ8WTP8 325 aaKnown RBP16.81■□□□□ 0.28
COL17A1-202ENST00000369733 NLRP4Q96MN2 994 aa16.81■□□□□ 0.28
COL17A1-202ENST00000369733 ZNF335Q9H4Z2 1342 aaPredicted RBP16.81■□□□□ 0.28
COL17A1-202ENST00000369733 ZC3H13Q5T200 1668 aaKnown RBP16.81■□□□□ 0.28
COL17A1-202ENST00000369733 PALM3A6NDB9 673 aaPredicted RBP16.81■□□□□ 0.28
COL17A1-202ENST00000369733 STX3Q13277 289 aa16.81■□□□□ 0.28
COL17A1-202ENST00000369733 AGXT2Q9BYV1 514 aa16.81■□□□□ 0.28
COL17A1-202ENST00000369733 MANSC1Q9H8J5 431 aa16.81■□□□□ 0.28
COL17A1-202ENST00000369733 H3BRJ5 948 aa16.81■□□□□ 0.28
COL17A1-202ENST00000369733 SDC4P31431 198 aa16.81■□□□□ 0.28
COL17A1-202ENST00000369733 KRT76Q01546 638 aa16.81■□□□□ 0.28
COL17A1-202ENST00000369733 SYCP2LQ5T4T6 812 aa16.81■□□□□ 0.28
COL17A1-202ENST00000369733 ARHGAP27Q6ZUM4 889 aa16.81■□□□□ 0.28
COL17A1-202ENST00000369733 APLFQ8IW19 511 aaPredicted RBP16.81■□□□□ 0.28
COL17A1-202ENST00000369733 C18orf8Q96DM3 657 aa16.81■□□□□ 0.28
COL17A1-202ENST00000369733 PPP1R16BQ96T49 567 aa16.81■□□□□ 0.28
COL17A1-202ENST00000369733 KLF6Q99612 283 aaPredicted RBP16.81■□□□□ 0.28
COL17A1-202ENST00000369733 SNX5Q9Y5X3 404 aa16.81■□□□□ 0.28
COL17A1-202ENST00000369733 SLC26A4O43511 780 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 SLC4A1P02730 911 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 PAMP19021 973 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 SLC20A2Q08357 652 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 TRIP10Q15642 601 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 MEI1Q5TIA1 1274 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 DONSONQ9NYP3 566 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms