RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 TBC1D10AQ9BXI6 508 aa18.99■□□□□ 0.63
APP-202ENST00000348990 DLGAP2Q9P1A6 1054 aa18.99■□□□□ 0.63
APP-202ENST00000348990 USH1CQ9Y6N9 552 aa18.99■□□□□ 0.63
APP-202ENST00000348990 POLGP54098 1239 aaPredicted RBP18.99■□□□□ 0.63
APP-202ENST00000348990 CGB2Q6NT52 195 aa18.99■□□□□ 0.63
APP-202ENST00000348990 ASRGL1Q7L266 308 aa18.99■□□□□ 0.63
APP-202ENST00000348990 EIF3DO15371 548 aaKnown RBP eCLIP18.98■□□□□ 0.63
APP-202ENST00000348990 LINGO3P0C6S8 592 aa18.98■□□□□ 0.63
APP-202ENST00000348990 GNAT1P11488 350 aa18.98■□□□□ 0.63
APP-202ENST00000348990 RASSF2P50749 326 aa18.98■□□□□ 0.63
APP-202ENST00000348990 AGGF1Q8N302 714 aaeCLIP18.98■□□□□ 0.63
APP-202ENST00000348990 STK32AQ8WU08 396 aa18.98■□□□□ 0.63
APP-202ENST00000348990 UTP4Q969X6 686 aaKnown RBP18.98■□□□□ 0.63
APP-202ENST00000348990 GRAMD1AQ96CP6 724 aa18.98■□□□□ 0.63
APP-202ENST00000348990 SMC6Q96SB8 1091 aa18.98■□□□□ 0.63
APP-202ENST00000348990 RBM15Q96T37 977 aaKnown RBP eCLIP18.98■□□□□ 0.63
APP-202ENST00000348990 TRAIPQ9BWF2 469 aa18.98■□□□□ 0.63
APP-202ENST00000348990 GDF11O95390 407 aa18.98■□□□□ 0.63
APP-202ENST00000348990 SPARCL1Q14515 664 aa18.98■□□□□ 0.63
APP-202ENST00000348990 RNF43Q68DV7 783 aa18.98■□□□□ 0.63
APP-202ENST00000348990 RFX8Q6ZV50 586 aa18.98■□□□□ 0.63
APP-202ENST00000348990 DNAJC9Q8WXX5 260 aa18.98■□□□□ 0.63
APP-202ENST00000348990 CBWD1Q9BRT8 395 aa18.98■□□□□ 0.63
APP-202ENST00000348990 ALG13Q9NP73 1137 aaKnown RBP18.98■□□□□ 0.63
APP-202ENST00000348990 NPHS2Q9NP85 383 aa18.98■□□□□ 0.63
APP-202ENST00000348990 METTL5Q9NRN9 209 aaKnown RBP18.98■□□□□ 0.63
APP-202ENST00000348990 ZMYM2Q9UBW7 1377 aa18.98■□□□□ 0.63
APP-202ENST00000348990 ZNF335Q9H4Z2 1342 aaPredicted RBP18.98■□□□□ 0.63
APP-202ENST00000348990 SHMT1P34896 483 aa18.98■□□□□ 0.63
APP-202ENST00000348990 PLCB3Q01970 1234 aa18.98■□□□□ 0.63
APP-202ENST00000348990 RASA3Q14644 834 aa18.98■□□□□ 0.63
APP-202ENST00000348990 CDCA2Q69YH5 1023 aaPredicted RBP18.98■□□□□ 0.63
APP-202ENST00000348990 DTX3LQ8TDB6 740 aa18.98■□□□□ 0.63
APP-202ENST00000348990 GRK7Q8WTQ7 553 aa18.98■□□□□ 0.63
APP-202ENST00000348990 SYT11Q9BT88 431 aa18.98■□□□□ 0.63
APP-202ENST00000348990 LAMB1P07942 1786 aa18.97■□□□□ 0.63
APP-202ENST00000348990 CYP3A7-CYP3A51PA0A087WV96 503 aa18.97■□□□□ 0.63
APP-202ENST00000348990 SLITRK3O94933 977 aa18.97■□□□□ 0.63
APP-202ENST00000348990 CYP3A7P24462 503 aa18.97■□□□□ 0.63
APP-202ENST00000348990 MTM1Q13496 603 aa18.97■□□□□ 0.63
APP-202ENST00000348990 TEKT4Q8WW24 435 aa18.97■□□□□ 0.63
APP-202ENST00000348990 TRABDQ9H4I3 376 aa18.97■□□□□ 0.63
APP-202ENST00000348990 UBN1Q9NPG3 1134 aa18.97■□□□□ 0.63
APP-202ENST00000348990 ZFP69BQ9UJL9 534 aa18.97■□□□□ 0.63
APP-202ENST00000348990 CHKBQ9Y259 395 aa18.97■□□□□ 0.63
APP-202ENST00000348990 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.97■□□□□ 0.63
APP-202ENST00000348990 RREB1Q92766 1687 aa18.97■□□□□ 0.63
APP-202ENST00000348990 MYH14Q7Z406 1995 aaKnown RBP18.97■□□□□ 0.63
APP-202ENST00000348990 SPDYE5A6NIY4 337 aa18.97■□□□□ 0.63
APP-202ENST00000348990 ALAS1P13196 640 aa18.97■□□□□ 0.63
APP-202ENST00000348990 SSTR3P32745 418 aaPredicted RBP18.97■□□□□ 0.63
APP-202ENST00000348990 PTDSS1P48651 473 aaKnown RBP18.97■□□□□ 0.63
APP-202ENST00000348990 WDR4P57081 412 aaKnown RBP18.97■□□□□ 0.63
APP-202ENST00000348990 C1orf186Q6ZWK4 172 aa18.97■□□□□ 0.63
APP-202ENST00000348990 SUPT20HQ8NEM7 779 aa18.97■□□□□ 0.63
APP-202ENST00000348990 EPS8L1Q8TE68 723 aa18.97■□□□□ 0.63
APP-202ENST00000348990 R3HDM2Q9Y2K5 976 aaKnown RBP18.97■□□□□ 0.63
APP-202ENST00000348990 TBX3O15119 743 aa18.96■□□□□ 0.63
APP-202ENST00000348990 PIAS1O75925 651 aa18.96■□□□□ 0.63
APP-202ENST00000348990 DCTN3O75935 186 aa18.96■□□□□ 0.63
APP-202ENST00000348990 BMP3P12645 472 aa18.96■□□□□ 0.63
APP-202ENST00000348990 KLC1Q07866 573 aa18.96■□□□□ 0.63
APP-202ENST00000348990 OVGP1Q12889 678 aa18.96■□□□□ 0.63
APP-202ENST00000348990 TAF1BQ53T94 588 aaPredicted RBP18.96■□□□□ 0.63
APP-202ENST00000348990 KLHL11Q9NVR0 708 aa18.96■□□□□ 0.63
APP-202ENST00000348990 CYP39A1Q9NYL5 469 aa18.96■□□□□ 0.63
APP-202ENST00000348990 PRKAG3Q9UGI9 489 aa18.96■□□□□ 0.63
APP-202ENST00000348990 A0A0G2JND7 137 aa18.96■□□□□ 0.63
APP-202ENST00000348990 FOSP01100 380 aaPredicted RBP18.96■□□□□ 0.63
APP-202ENST00000348990 IFNB1P01574 187 aa18.96■□□□□ 0.63
APP-202ENST00000348990 RRM1P23921 792 aa18.96■□□□□ 0.63
APP-202ENST00000348990 CERKLQ49MI3 558 aaPredicted RBP18.96■□□□□ 0.63
APP-202ENST00000348990 LLGL2Q6P1M3 1020 aa18.96■□□□□ 0.63
APP-202ENST00000348990 SCYL3Q8IZE3 742 aa18.96■□□□□ 0.63
APP-202ENST00000348990 ZSWIM2Q8NEG5 633 aa18.96■□□□□ 0.63
APP-202ENST00000348990 DHX38Q92620 1227 aaKnown RBP18.96■□□□□ 0.63
APP-202ENST00000348990 LENG9Q96B70 501 aa18.96■□□□□ 0.63
APP-202ENST00000348990 LRRC19Q9H756 370 aa18.96■□□□□ 0.63
APP-202ENST00000348990 PAPOLBQ9NRJ5 636 aaKnown RBP18.96■□□□□ 0.63
APP-202ENST00000348990 FRMPD4Q14CM0 1322 aa18.96■□□□□ 0.63
APP-202ENST00000348990 ATP5HO75947 161 aa18.96■□□□□ 0.63
APP-202ENST00000348990 TNFAIP8L3Q5GJ75 292 aa18.96■□□□□ 0.63
APP-202ENST00000348990 ANO7Q6IWH7 933 aa18.96■□□□□ 0.63
APP-202ENST00000348990 PTF1AQ7RTS3 328 aa18.96■□□□□ 0.63
APP-202ENST00000348990 VPS52Q8N1B4 723 aa18.96■□□□□ 0.63
APP-202ENST00000348990 ATL2Q8NHH9 583 aa18.96■□□□□ 0.63
APP-202ENST00000348990 ARHGEF1Q92888 912 aaKnown RBP18.96■□□□□ 0.63
APP-202ENST00000348990 MCUR1Q96AQ8 359 aa18.96■□□□□ 0.63
APP-202ENST00000348990 POLR3CQ9BUI4 534 aaPredicted RBP18.96■□□□□ 0.63
APP-202ENST00000348990 ATP8B3O60423 1300 aa18.95■□□□□ 0.62
APP-202ENST00000348990 CFAP69A5D8W1 941 aa18.95■□□□□ 0.62
APP-202ENST00000348990 PEX11AO75192 247 aa18.95■□□□□ 0.62
APP-202ENST00000348990 RALAP11233 206 aa18.95■□□□□ 0.62
APP-202ENST00000348990 PLS3P13797 630 aa18.95■□□□□ 0.62
APP-202ENST00000348990 MAGEA4P43358 317 aa18.95■□□□□ 0.62
APP-202ENST00000348990 ICA1Q05084 483 aa18.95■□□□□ 0.62
APP-202ENST00000348990 NFIAQ12857 509 aa18.95■□□□□ 0.62
APP-202ENST00000348990 ZC3H18Q86VM9 953 aaKnown RBP18.95■□□□□ 0.62
APP-202ENST00000348990 ZNF148Q9UQR1 794 aa18.95■□□□□ 0.62
APP-202ENST00000348990 GOLGA8SH3BPF8 625 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms