RNA–Protein interactions for RNA: ENST00000348911.10

SBF1-201, Transcript of SET binding factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SBF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-201ENST00000348911 NEU2Q9Y3R4 380 aa16.22■□□□□ 0.19
SBF1-201ENST00000348911 EIF3EP60228 445 aaKnown RBP16.22■□□□□ 0.19
SBF1-201ENST00000348911 MORF4L2Q15014 288 aa16.22■□□□□ 0.19
SBF1-201ENST00000348911 MDH1BQ5I0G3 518 aa16.22■□□□□ 0.19
SBF1-201ENST00000348911 FAM102AQ5T9C2 384 aaPredicted RBP16.22■□□□□ 0.19
SBF1-201ENST00000348911 NSUN6Q8TEA1 469 aaKnown RBP16.22■□□□□ 0.19
SBF1-201ENST00000348911 COMTP21964 271 aa16.22■□□□□ 0.19
SBF1-201ENST00000348911 CDH6P55285 790 aa16.22■□□□□ 0.19
SBF1-201ENST00000348911 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.22■□□□□ 0.191e-6■■■■■ 35
SBF1-201ENST00000348911 PSMC3IPQ9P2W1 217 aaPredicted RBP16.22■□□□□ 0.19
SBF1-201ENST00000348911 SALL3Q9BXA9 1300 aa16.22■□□□□ 0.19
SBF1-201ENST00000348911 FXR2P51116 673 aaKnown RBP eCLIP16.22■□□□□ 0.196e-6■■■■□ 22.2
SBF1-201ENST00000348911 CEP55Q53EZ4 464 aa16.22■□□□□ 0.19
SBF1-201ENST00000348911 RC3H1Q5TC82 1133 aaKnown RBP16.22■□□□□ 0.19
SBF1-201ENST00000348911 MDM1Q8TC05 714 aa16.22■□□□□ 0.19
SBF1-201ENST00000348911 DUSP10Q9Y6W6 482 aa16.22■□□□□ 0.19
SBF1-201ENST00000348911 FLT1P17948 1338 aa16.22■□□□□ 0.19
SBF1-201ENST00000348911 PAPD7Q5XG87 772 aaKnown RBP16.22■□□□□ 0.19
SBF1-201ENST00000348911 RNF139Q8WU17 664 aa16.22■□□□□ 0.19
SBF1-201ENST00000348911 SCG3Q8WXD2 468 aaKnown RBP16.22■□□□□ 0.19
SBF1-201ENST00000348911 TMEM117Q9H0C3 514 aa16.22■□□□□ 0.19
SBF1-201ENST00000348911 PLAGL2Q9UPG8 496 aa16.22■□□□□ 0.19
SBF1-201ENST00000348911 ECE2O60344 883 aa16.21■□□□□ 0.19
SBF1-201ENST00000348911 PAPOLAP51003 745 aaKnown RBP16.21■□□□□ 0.19
SBF1-201ENST00000348911 AP1B1Q10567 949 aa16.21■□□□□ 0.19
SBF1-201ENST00000348911 MKRN4PQ13434 485 aaPredicted RBP16.21■□□□□ 0.19
SBF1-201ENST00000348911 SMAD1Q15797 465 aaKnown RBP16.21■□□□□ 0.19
SBF1-201ENST00000348911 SH3GL3Q99963 347 aa16.21■□□□□ 0.19
SBF1-201ENST00000348911 HERVK_113P62684 666 aa16.21■□□□□ 0.19
SBF1-201ENST00000348911 HABP4Q5JVS0 413 aaKnown RBP16.21■□□□□ 0.19
SBF1-201ENST00000348911 SNRNP48Q6IEG0 339 aaKnown RBP16.21■□□□□ 0.19
SBF1-201ENST00000348911 ANKZF1Q9H8Y5 726 aa16.21■□□□□ 0.19
SBF1-201ENST00000348911 TRPC5Q9UL62 973 aaPredicted RBP16.21■□□□□ 0.19
SBF1-201ENST00000348911 TYK2P29597 1187 aa16.21■□□□□ 0.19
SBF1-201ENST00000348911 SLC29A2Q14542 456 aa16.21■□□□□ 0.19
SBF1-201ENST00000348911 C16orf87Q6PH81 154 aa16.21■□□□□ 0.19
SBF1-201ENST00000348911 BARGINQ6ZT62 677 aa16.21■□□□□ 0.19
SBF1-201ENST00000348911 CYFIP1Q7L576 1253 aa16.21■□□□□ 0.19
SBF1-201ENST00000348911 STAMBPL1Q96FJ0 436 aa16.21■□□□□ 0.19
SBF1-201ENST00000348911 ARHGAP10A1A4S6 786 aa16.21■□□□□ 0.19
SBF1-201ENST00000348911 TBX3O15119 743 aa16.21■□□□□ 0.19
SBF1-201ENST00000348911 TOB1P50616 345 aaPredicted RBP16.21■□□□□ 0.19
SBF1-201ENST00000348911 EFTUD2Q15029 972 aaKnown RBP eCLIP16.21■□□□□ 0.199e-7■■■■□ 26.7
SBF1-201ENST00000348911 GRAMD4Q6IC98 578 aa16.21■□□□□ 0.19
SBF1-201ENST00000348911 PODNQ7Z5L7 613 aa16.21■□□□□ 0.19
SBF1-201ENST00000348911 TEX9Q8N6V9 391 aa16.21■□□□□ 0.19
SBF1-201ENST00000348911 SENP7Q9BQF6 1050 aa16.21■□□□□ 0.19
SBF1-201ENST00000348911 FSD1LQ9BXM9 530 aa16.21■□□□□ 0.19
SBF1-201ENST00000348911 MRPL4Q9BYD3 311 aaKnown RBP16.21■□□□□ 0.19
SBF1-201ENST00000348911 ALG6Q9Y672 507 aa16.21■□□□□ 0.19
SBF1-201ENST00000348911 RARS2Q5T160 578 aaKnown RBP16.21■□□□□ 0.18
SBF1-201ENST00000348911 RANBP17Q9H2T7 1088 aaKnown RBP16.21■□□□□ 0.18
SBF1-201ENST00000348911 CD248Q9HCU0 757 aa16.21■□□□□ 0.18
SBF1-201ENST00000348911 IGF2BP3O00425 579 aaKnown RBP eCLIP16.2■□□□□ 0.18
SBF1-201ENST00000348911 APOL1O14791 398 aa16.2■□□□□ 0.18
SBF1-201ENST00000348911 ERFP50548 548 aa16.2■□□□□ 0.18
SBF1-201ENST00000348911 TPCN2Q8NHX9 752 aa16.2■□□□□ 0.18
SBF1-201ENST00000348911 PHKA2P46019 1235 aa16.2■□□□□ 0.18
SBF1-201ENST00000348911 AP3M2P53677 418 aa16.2■□□□□ 0.18
SBF1-201ENST00000348911 ZC2HC1CQ53FD0 456 aaPredicted RBP16.2■□□□□ 0.18
SBF1-201ENST00000348911 DSTYKQ6XUX3 929 aa16.2■□□□□ 0.18
SBF1-201ENST00000348911 RNF146Q9NTX7 359 aa16.2■□□□□ 0.18
SBF1-201ENST00000348911 KYNUQ16719 465 aa16.2■□□□□ 0.18
SBF1-201ENST00000348911 ZNF34Q8IZ26 560 aa16.2■□□□□ 0.18
SBF1-201ENST00000348911 COPB2P35606 906 aa16.2■□□□□ 0.18
SBF1-201ENST00000348911 ITGA8P53708 1063 aa16.2■□□□□ 0.18
SBF1-201ENST00000348911 PSPC1Q8WXF1 523 aaKnown RBP16.2■□□□□ 0.18
SBF1-201ENST00000348911 CAPN6Q9Y6Q1 641 aa16.2■□□□□ 0.18
SBF1-201ENST00000348911 CEMIPQ8WUJ3 1361 aa16.2■□□□□ 0.18
SBF1-201ENST00000348911 TYW5A2RUC4 315 aaKnown RBP16.2■□□□□ 0.18
SBF1-201ENST00000348911 ATMINO43313 823 aaPredicted RBP16.2■□□□□ 0.18
SBF1-201ENST00000348911 KLC1Q07866 573 aa16.2■□□□□ 0.18
SBF1-201ENST00000348911 SYCP2LQ5T4T6 812 aa16.2■□□□□ 0.18
SBF1-201ENST00000348911 CATSPER4Q7RTX7 472 aa16.2■□□□□ 0.18
SBF1-201ENST00000348911 AP5M1Q9H0R1 490 aa16.2■□□□□ 0.18
SBF1-201ENST00000348911 DHX35Q9H5Z1 703 aaKnown RBP16.2■□□□□ 0.18
SBF1-201ENST00000348911 LRRIQ1Q96JM4 1722 aa16.2■□□□□ 0.18
SBF1-201ENST00000348911 RNF103-CHMP3A0A140T963 221 aa16.19■□□□□ 0.18
SBF1-201ENST00000348911 GJB7Q6PEY0 223 aa16.19■□□□□ 0.18
SBF1-201ENST00000348911 LRRN4CLQ8ND94 238 aa16.19■□□□□ 0.18
SBF1-201ENST00000348911 MYCBPAPQ8TBZ2 947 aa16.19■□□□□ 0.18
SBF1-201ENST00000348911 ING2Q9H160 280 aa16.19■□□□□ 0.18
SBF1-201ENST00000348911 PRLRP16471 622 aa16.19■□□□□ 0.18
SBF1-201ENST00000348911 ARHGEF1Q92888 912 aaKnown RBP16.19■□□□□ 0.18
SBF1-201ENST00000348911 POU5F1BQ06416 359 aa16.19■□□□□ 0.18
SBF1-201ENST00000348911 CYB5D1Q6P9G0 228 aa16.19■□□□□ 0.18
SBF1-201ENST00000348911 C16orf86Q6ZW13 317 aa16.19■□□□□ 0.18
SBF1-201ENST00000348911 C3orf20Q8ND61 904 aa16.19■□□□□ 0.18
SBF1-201ENST00000348911 AGR3Q8TD06 166 aa16.19■□□□□ 0.18
SBF1-201ENST00000348911 LBHD1Q9BQE6 289 aaPredicted RBP16.19■□□□□ 0.18
SBF1-201ENST00000348911 TIPINQ9BVW5 301 aa16.19■□□□□ 0.18
SBF1-201ENST00000348911 C2orf40Q9H1Z8 148 aa16.19■□□□□ 0.18
SBF1-201ENST00000348911 NOD2Q9HC29 1040 aa16.19■□□□□ 0.18
SBF1-201ENST00000348911 WARS2Q9UGM6 360 aaKnown RBP16.19■□□□□ 0.18
SBF1-201ENST00000348911 EIF3DO15371 548 aaKnown RBP eCLIP16.19■□□□□ 0.18
SBF1-201ENST00000348911 PDHBP11177 359 aa16.19■□□□□ 0.18
SBF1-201ENST00000348911 RASA1P20936 1047 aa16.19■□□□□ 0.18
SBF1-201ENST00000348911 TTC8Q8TAM2 541 aa16.19■□□□□ 0.18
SBF1-201ENST00000348911 NCLNQ969V3 563 aa16.19■□□□□ 0.18
SBF1-201ENST00000348911 ALKBH8Q96BT7 664 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms