RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 ARVCFO00192 962 aa15.92■□□□□ 0.14
CXCL12-201ENST00000343575 MFAP3LO75121 409 aa15.92■□□□□ 0.14
CXCL12-201ENST00000343575 CTSHP09668 335 aa15.92■□□□□ 0.14
CXCL12-201ENST00000343575 ETF1P62495 437 aaKnown RBP15.92■□□□□ 0.14
CXCL12-201ENST00000343575 ENPEPQ07075 957 aa15.92■□□□□ 0.14
CXCL12-201ENST00000343575 PTK7Q13308 1070 aa15.92■□□□□ 0.14
CXCL12-201ENST00000343575 E4F1Q66K89 784 aaPredicted RBP15.92■□□□□ 0.14
CXCL12-201ENST00000343575 CATSPER4Q7RTX7 472 aa15.92■□□□□ 0.14
CXCL12-201ENST00000343575 FAM228AQ86W67 206 aa15.92■□□□□ 0.14
CXCL12-201ENST00000343575 ARMC5Q96C12 935 aa15.92■□□□□ 0.14
CXCL12-201ENST00000343575 RBAKQ9NYW8 714 aaPredicted RBP15.92■□□□□ 0.14
CXCL12-201ENST00000343575 CAPN11Q9UMQ6 739 aa15.92■□□□□ 0.14
CXCL12-201ENST00000343575 PMM2O15305 246 aa15.91■□□□□ 0.14
CXCL12-201ENST00000343575 PCBP1Q15365 356 aaKnown RBP eCLIP15.91■□□□□ 0.14
CXCL12-201ENST00000343575 ENOX2Q16206 610 aaKnown RBP15.91■□□□□ 0.14
CXCL12-201ENST00000343575 EXOC3L4Q17RC7 722 aa15.91■□□□□ 0.14
CXCL12-201ENST00000343575 SCARA3Q6AZY7 606 aa15.91■□□□□ 0.14
CXCL12-201ENST00000343575 TRAF7Q6Q0C0 670 aa15.91■□□□□ 0.14
CXCL12-201ENST00000343575 TMCO3Q6UWJ1 677 aa15.91■□□□□ 0.14
CXCL12-201ENST00000343575 C15orf39Q6ZRI6 1047 aa15.91■□□□□ 0.14
CXCL12-201ENST00000343575 BRSK2Q8IWQ3 736 aa15.91■□□□□ 0.14
CXCL12-201ENST00000343575 GANQ9H2C0 597 aa15.91■□□□□ 0.14
CXCL12-201ENST00000343575 TRPV2Q9Y5S1 764 aa15.91■□□□□ 0.14
CXCL12-201ENST00000343575 V9GYY5 206 aaPredicted RBP15.91■□□□□ 0.14
CXCL12-201ENST00000343575 ANK1P16157 1881 aa15.91■□□□□ 0.14
CXCL12-201ENST00000343575 GOLGA6L9A6NEM1 432 aa15.91■□□□□ 0.14
CXCL12-201ENST00000343575 AKR1B15C9JRZ8 316 aaPredicted RBP15.91■□□□□ 0.14
CXCL12-201ENST00000343575 DLATP10515 647 aaKnown RBP15.91■□□□□ 0.14
CXCL12-201ENST00000343575 MCF2P10911 925 aa15.91■□□□□ 0.14
CXCL12-201ENST00000343575 TRIM21P19474 475 aaKnown RBP15.91■□□□□ 0.14
CXCL12-201ENST00000343575 THPOP40225 353 aa15.91■□□□□ 0.14
CXCL12-201ENST00000343575 CTCFP49711 727 aaPredicted RBP15.91■□□□□ 0.14
CXCL12-201ENST00000343575 OSTNP61366 133 aa15.91■□□□□ 0.14
CXCL12-201ENST00000343575 LMBRD2Q68DH5 695 aaPredicted RBP15.91■□□□□ 0.14
CXCL12-201ENST00000343575 PPFIBP1Q86W92 1011 aa15.91■□□□□ 0.14
CXCL12-201ENST00000343575 U2AF1L4Q8WU68 220 aaKnown RBP15.91■□□□□ 0.14
CXCL12-201ENST00000343575 BAP1Q92560 729 aa15.91■□□□□ 0.14
CXCL12-201ENST00000343575 UBXN4Q92575 508 aa15.91■□□□□ 0.14
CXCL12-201ENST00000343575 LSM14BQ9BX40 385 aaKnown RBP15.91■□□□□ 0.14
CXCL12-201ENST00000343575 EIF2AQ9BY44 585 aaKnown RBP15.91■□□□□ 0.14
CXCL12-201ENST00000343575 TMEM51Q9NW97 253 aa15.91■□□□□ 0.14
CXCL12-201ENST00000343575 ZNF446Q9NWS9 450 aa15.91■□□□□ 0.14
CXCL12-201ENST00000343575 FHOD1Q9Y613 1164 aa15.91■□□□□ 0.14
CXCL12-201ENST00000343575 EFCAB8A8MWE9 144 aa15.9■□□□□ 0.14
CXCL12-201ENST00000343575 TULP2O00295 520 aa15.9■□□□□ 0.14
CXCL12-201ENST00000343575 SGPL1O95470 568 aa15.9■□□□□ 0.14
CXCL12-201ENST00000343575 TRIM14Q14142 442 aa15.9■□□□□ 0.14
CXCL12-201ENST00000343575 TMEM132AQ24JP5 1023 aa15.9■□□□□ 0.14
CXCL12-201ENST00000343575 EPC2Q52LR7 807 aa15.9■□□□□ 0.14
CXCL12-201ENST00000343575 FAM26DQ5JW98 314 aa15.9■□□□□ 0.14
CXCL12-201ENST00000343575 UBXN11Q5T124 520 aa15.9■□□□□ 0.14
CXCL12-201ENST00000343575 TRIM65Q6PJ69 517 aa15.9■□□□□ 0.14
CXCL12-201ENST00000343575 GBP6Q6ZN66 633 aa15.9■□□□□ 0.14
CXCL12-201ENST00000343575 SV2AQ7L0J3 742 aa15.9■□□□□ 0.14
CXCL12-201ENST00000343575 RSPH3Q86UC2 560 aa15.9■□□□□ 0.14
CXCL12-201ENST00000343575 TXLNBQ8N3L3 684 aa15.9■□□□□ 0.14
CXCL12-201ENST00000343575 SEMA4DQ92854 862 aa15.9■□□□□ 0.14
CXCL12-201ENST00000343575 NUP58Q9BVL2 599 aa15.9■□□□□ 0.14
CXCL12-201ENST00000343575 AGO3Q9H9G7 860 aaKnown RBP15.9■□□□□ 0.14
CXCL12-201ENST00000343575 PLCB1Q9NQ66 1216 aa15.9■□□□□ 0.14
CXCL12-201ENST00000343575 GCNT4Q9P109 453 aa15.9■□□□□ 0.14
CXCL12-201ENST00000343575 AJAP1Q9UKB5 411 aaPredicted RBP15.9■□□□□ 0.14
CXCL12-201ENST00000343575 COQ4Q9Y3A0 265 aa15.9■□□□□ 0.14
CXCL12-201ENST00000343575 A0A1W2PQJ5 194 aa15.89■□□□□ 0.13
CXCL12-201ENST00000343575 ZRANB2O95218 330 aaKnown RBP eCLIP15.89■□□□□ 0.13
CXCL12-201ENST00000343575 C4BPAP04003 597 aaKnown RBP15.89■□□□□ 0.13
CXCL12-201ENST00000343575 STAG3L1P0CL83 205 aa15.89■□□□□ 0.13
CXCL12-201ENST00000343575 PNMA6AP0CW24 399 aaPredicted RBP15.89■□□□□ 0.13
CXCL12-201ENST00000343575 KRT9P35527 623 aa15.89■□□□□ 0.13
CXCL12-201ENST00000343575 CLCN6P51797 869 aa15.89■□□□□ 0.13
CXCL12-201ENST00000343575 MYL7Q01449 175 aa15.89■□□□□ 0.13
CXCL12-201ENST00000343575 GPS2Q13227 327 aa15.89■□□□□ 0.13
CXCL12-201ENST00000343575 ZNF618Q5T7W0 954 aa15.89■□□□□ 0.13
CXCL12-201ENST00000343575 KLHDC7AQ5VTJ3 777 aa15.89■□□□□ 0.13
CXCL12-201ENST00000343575 OR5B17Q8NGF7 314 aa15.89■□□□□ 0.13
CXCL12-201ENST00000343575 PCMTD1Q96MG8 357 aaPredicted RBP15.89■□□□□ 0.13
CXCL12-201ENST00000343575 DNAJC7Q99615 494 aa15.89■□□□□ 0.13
CXCL12-201ENST00000343575 DNAI1Q9UI46 699 aa15.89■□□□□ 0.13
CXCL12-201ENST00000343575 P4HA2O15460 535 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 ZSCAN12O43309 604 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 CXCL8P10145 99 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 FECHP22830 423 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 MXI1P50539 228 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 PKN2Q16513 984 aaKnown RBP15.88■□□□□ 0.13
CXCL12-201ENST00000343575 ERCC6LQ2NKX8 1250 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 SLC10A6Q3KNW5 377 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 ARHGAP29Q52LW3 1261 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 FBXO47Q5MNV8 452 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 GJB7Q6PEY0 223 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 SYT10Q6XYQ8 523 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 FAM126BQ8IXS8 530 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 TAS1R2Q8TE23 839 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 CXCL16Q9H2A7 254 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 TMEM8AQ9HCN3 771 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 ABHD10Q9NUJ1 306 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.88■□□□□ 0.13
CXCL12-201ENST00000343575 LUC7L2Q9Y383 392 aaKnown RBP15.88■□□□□ 0.13
CXCL12-201ENST00000343575 KIAA0100Q14667 2235 aaKnown RBP15.88■□□□□ 0.13
CXCL12-201ENST00000343575 M0QZ92 97 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 NPTXRO95502 500 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms