RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 MTF1Q14872 753 aa18.76■□□□□ 0.59
CLDN4-201ENST00000340958 DNTTIP2Q5QJE6 756 aaKnown RBP18.76■□□□□ 0.59
CLDN4-201ENST00000340958 SV2AQ7L0J3 742 aa18.76■□□□□ 0.59
CLDN4-201ENST00000340958 CCAR2Q8N163 923 aaKnown RBP18.76■□□□□ 0.59
CLDN4-201ENST00000340958 FBXL13Q8NEE6 735 aa18.76■□□□□ 0.59
CLDN4-201ENST00000340958 CHP1Q99653 195 aa18.76■□□□□ 0.59
CLDN4-201ENST00000340958 CGRRF1Q99675 332 aa18.76■□□□□ 0.59
CLDN4-201ENST00000340958 APEX2Q9UBZ4 518 aa18.76■□□□□ 0.59
CLDN4-201ENST00000340958 DNAJC12Q9UKB3 198 aa18.76■□□□□ 0.59
CLDN4-201ENST00000340958 CPSF3Q9UKF6 684 aaKnown RBP18.76■□□□□ 0.59
CLDN4-201ENST00000340958 PLAGL2Q9UPG8 496 aa18.76■□□□□ 0.59
CLDN4-201ENST00000340958 ALPK3Q96L96 1907 aa18.75■□□□□ 0.59
CLDN4-201ENST00000340958 KBTBD13C9JR72 458 aa18.75■□□□□ 0.59
CLDN4-201ENST00000340958 ABLIM1O14639 778 aa18.75■□□□□ 0.59
CLDN4-201ENST00000340958 PMM2O15305 246 aa18.75■□□□□ 0.59
CLDN4-201ENST00000340958 IPO7O95373 1038 aaKnown RBP18.75■□□□□ 0.59
CLDN4-201ENST00000340958 MRPS6P82932 125 aaKnown RBP18.75■□□□□ 0.59
CLDN4-201ENST00000340958 SNX17Q15036 470 aa18.75■□□□□ 0.59
CLDN4-201ENST00000340958 ASIC2Q16515 512 aa18.75■□□□□ 0.59
CLDN4-201ENST00000340958 KYAT1Q16773 422 aa18.75■□□□□ 0.59
CLDN4-201ENST00000340958 EPC2Q52LR7 807 aa18.75■□□□□ 0.59
CLDN4-201ENST00000340958 TDRD12Q587J7 1177 aaKnown RBP18.75■□□□□ 0.59
CLDN4-201ENST00000340958 IQCEQ6IPM2 695 aa18.75■□□□□ 0.59
CLDN4-201ENST00000340958 NOTUMQ6P988 496 aa18.75■□□□□ 0.59
CLDN4-201ENST00000340958 GJB7Q6PEY0 223 aa18.75■□□□□ 0.59
CLDN4-201ENST00000340958 TOGARAM2Q6ZUX3 1019 aa18.75■□□□□ 0.59
CLDN4-201ENST00000340958 CCDC42Q96M95 316 aa18.75■□□□□ 0.59
CLDN4-201ENST00000340958 TSEN34Q9BSV6 310 aaKnown RBP18.75■□□□□ 0.59
CLDN4-201ENST00000340958 CELF4Q9BZC1 486 aaKnown RBP18.75■□□□□ 0.59
CLDN4-201ENST00000340958 TRIM6Q9C030 488 aaPredicted RBP18.75■□□□□ 0.59
CLDN4-201ENST00000340958 SIX2Q9NPC8 291 aa18.75■□□□□ 0.59
CLDN4-201ENST00000340958 FBXL5Q9UKA1 691 aa18.75■□□□□ 0.59
CLDN4-201ENST00000340958 A0A1B0GUA9 196 aa18.74■□□□□ 0.59
CLDN4-201ENST00000340958 RPLP2P05387 115 aaKnown RBP18.74■□□□□ 0.59
CLDN4-201ENST00000340958 STAG3L1P0CL83 205 aa18.74■□□□□ 0.59
CLDN4-201ENST00000340958 CYLC1P35663 651 aaPredicted RBP18.74■□□□□ 0.59
CLDN4-201ENST00000340958 ENOX2Q16206 610 aaKnown RBP18.74■□□□□ 0.59
CLDN4-201ENST00000340958 MEA1Q16626 185 aa18.74■□□□□ 0.59
CLDN4-201ENST00000340958 WDR44Q5JSH3 913 aa18.74■□□□□ 0.59
CLDN4-201ENST00000340958 E4F1Q66K89 784 aaPredicted RBP18.74■□□□□ 0.59
CLDN4-201ENST00000340958 WDR59Q6PJI9 974 aa18.74■□□□□ 0.59
CLDN4-201ENST00000340958 RAD9BQ6WBX8 426 aa18.74■□□□□ 0.59
CLDN4-201ENST00000340958 SESTD1Q86VW0 696 aa18.74■□□□□ 0.59
CLDN4-201ENST00000340958 SYN2Q92777 582 aaPredicted RBP18.74■□□□□ 0.59
CLDN4-201ENST00000340958 DESI2Q9BSY9 194 aa18.74■□□□□ 0.59
CLDN4-201ENST00000340958 NHEJ1Q9H9Q4 299 aaPredicted RBP18.74■□□□□ 0.59
CLDN4-201ENST00000340958 UBE2TQ9NPD8 197 aaPredicted RBP18.74■□□□□ 0.59
CLDN4-201ENST00000340958 RAB20Q9NX57 234 aa18.74■□□□□ 0.59
CLDN4-201ENST00000340958 CLTAP09496 248 aa18.74■□□□□ 0.59
CLDN4-201ENST00000340958 CTSHP09668 335 aa18.74■□□□□ 0.59
CLDN4-201ENST00000340958 CCDC175P0C221 793 aa18.74■□□□□ 0.59
CLDN4-201ENST00000340958 RFX1P22670 979 aa18.74■□□□□ 0.59
CLDN4-201ENST00000340958 FECHP22830 423 aa18.74■□□□□ 0.59
CLDN4-201ENST00000340958 PIK3CAP42336 1068 aa18.74■□□□□ 0.59
CLDN4-201ENST00000340958 AP3M2P53677 418 aa18.74■□□□□ 0.59
CLDN4-201ENST00000340958 MCCD1P59942 119 aaPredicted RBP18.74■□□□□ 0.59
CLDN4-201ENST00000340958 DCAF4L1Q3SXM0 396 aa18.74■□□□□ 0.59
CLDN4-201ENST00000340958 CEP120Q8N960 986 aa18.74■□□□□ 0.59
CLDN4-201ENST00000340958 TAS1R2Q8TE23 839 aa18.74■□□□□ 0.59
CLDN4-201ENST00000340958 STARD7Q9NQZ5 370 aa18.74■□□□□ 0.59
CLDN4-201ENST00000340958 PIN4Q9Y237 131 aaKnown RBP18.74■□□□□ 0.59
CLDN4-201ENST00000340958 DAAM1Q9Y4D1 1078 aa18.74■□□□□ 0.59
CLDN4-201ENST00000340958 TRPV2Q9Y5S1 764 aa18.74■□□□□ 0.59
CLDN4-201ENST00000340958 CDY2AQ9Y6F7 541 aa18.74■□□□□ 0.59
CLDN4-201ENST00000340958 FAM189A1O60320 539 aa18.73■□□□□ 0.59
CLDN4-201ENST00000340958 IL18RAPO95256 599 aa18.73■□□□□ 0.59
CLDN4-201ENST00000340958 NPTXRO95502 500 aa18.73■□□□□ 0.59
CLDN4-201ENST00000340958 AXLP30530 894 aa18.73■□□□□ 0.59
CLDN4-201ENST00000340958 HNRNPH3P31942 346 aaKnown RBP18.73■□□□□ 0.59
CLDN4-201ENST00000340958 THPOP40225 353 aa18.73■□□□□ 0.59
CLDN4-201ENST00000340958 STAT1P42224 750 aa18.73■□□□□ 0.59
CLDN4-201ENST00000340958 WNT7BP56706 349 aa18.73■□□□□ 0.59
CLDN4-201ENST00000340958 CLDN10P78369 228 aa18.73■□□□□ 0.59
CLDN4-201ENST00000340958 TFAMQ00059 246 aaKnown RBP18.73■□□□□ 0.59
CLDN4-201ENST00000340958 CDK17Q00537 523 aa18.73■□□□□ 0.59
CLDN4-201ENST00000340958 ARHGAP44Q17R89 818 aa18.73■□□□□ 0.59
CLDN4-201ENST00000340958 SLC27A1Q6PCB7 646 aa18.73■□□□□ 0.59
CLDN4-201ENST00000340958 NECAB2Q7Z6G3 386 aa18.73■□□□□ 0.59
CLDN4-201ENST00000340958 SERINC5Q86VE9 423 aa18.73■□□□□ 0.59
CLDN4-201ENST00000340958 WDR49Q8IV35 697 aa18.73■□□□□ 0.59
CLDN4-201ENST00000340958 NT5C1BQ96P26 610 aa18.73■□□□□ 0.59
CLDN4-201ENST00000340958 STK33Q9BYT3 514 aa18.73■□□□□ 0.59
CLDN4-201ENST00000340958 MYO6Q9UM54 1294 aa18.73■□□□□ 0.59
CLDN4-201ENST00000340958 PPP2R2CQ9Y2T4 447 aa18.73■□□□□ 0.59
CLDN4-201ENST00000340958 SCN10AQ9Y5Y9 1956 aa18.73■□□□□ 0.59
CLDN4-201ENST00000340958 DNM1LO00429 736 aa18.72■□□□□ 0.59
CLDN4-201ENST00000340958 OFD1O75665 1012 aa18.72■□□□□ 0.59
CLDN4-201ENST00000340958 TNNC2P02585 160 aa18.72■□□□□ 0.59
CLDN4-201ENST00000340958 SERPING1P05155 500 aa18.72■□□□□ 0.59
CLDN4-201ENST00000340958 TMEM191BP0C7N4 346 aa18.72■□□□□ 0.59
CLDN4-201ENST00000340958 CXCL8P10145 99 aa18.72■□□□□ 0.59
CLDN4-201ENST00000340958 KLHL30Q0D2K2 578 aa18.72■□□□□ 0.59
CLDN4-201ENST00000340958 DUOXA2Q1HG44 320 aa18.72■□□□□ 0.59
CLDN4-201ENST00000340958 PHLDB3Q6NSJ2 640 aa18.72■□□□□ 0.59
CLDN4-201ENST00000340958 DPY19L2P1Q6NXN4 242 aa18.72■□□□□ 0.59
CLDN4-201ENST00000340958 FMNL3Q8IVF7 1028 aa18.72■□□□□ 0.59
CLDN4-201ENST00000340958 CCDC170Q8IYT3 715 aa18.72■□□□□ 0.59
CLDN4-201ENST00000340958 PPM1KQ8N3J5 372 aa18.72■□□□□ 0.59
CLDN4-201ENST00000340958 LMO3Q8TAP4 145 aa18.72■□□□□ 0.59
CLDN4-201ENST00000340958 TMEM40Q8WWA1 233 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms