RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 PCYOX1LQ8NBM8 494 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 ZFP28Q8NHY6 868 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 DTX3LQ8TDB6 740 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 NLRP7Q8WX94 980 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 CCDC77Q9BR77 488 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 KIAA1683Q9H0B3 1180 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 RBM38Q9H0Z9 239 aaKnown RBP9.11□□□□□ -0.95
TDP1-201ENST00000335725 TMEM60Q9H2L4 133 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 STMN3Q9NZ72 180 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 NPHP3-ACAD11A0A0J9YXS1 232 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 F8W8V4 182 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 MYBP10242 640 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 SF3B4Q15427 424 aaKnown RBP eCLIP9.11□□□□□ -0.952e-7■■■■■ 32.9
TDP1-201ENST00000335725 NADK2Q4G0N4 442 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 POTEHQ6S545 545 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 BTNL9Q6UXG8 535 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 TMC3Q7Z5M5 1100 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 GPR141Q7Z602 305 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 NOSTRINQ8IVI9 506 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 CCDC82Q8N4S0 544 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 SLC7A6OSQ96CW6 309 aaPredicted RBP9.11□□□□□ -0.95
TDP1-201ENST00000335725 VPS35Q96QK1 796 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 ADAM7Q9H2U9 754 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 MBIPQ9NS73 344 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 USP40Q9NVE5 1235 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 PPP1R1BQ9UD71 204 aaPredicted RBP9.11□□□□□ -0.95
TDP1-201ENST00000335725 RSL24D1Q9UHA3 163 aaKnown RBP9.11□□□□□ -0.95
TDP1-201ENST00000335725 ATP11BQ9Y2G3 1177 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 C2orf81A6NN90 581 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 KPNA4O00629 521 aaPredicted RBP9.11□□□□□ -0.95
TDP1-201ENST00000335725 XPO1O14980 1071 aaKnown RBP9.11□□□□□ -0.95
TDP1-201ENST00000335725 RAD51CO43502 376 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 NMT2O60551 498 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 MAP3K6O95382 1288 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 PGM3O95394 542 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 POLD2P49005 469 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 NR1H2P55055 460 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 VCPP55072 806 aaKnown RBP9.11□□□□□ -0.95
TDP1-201ENST00000335725 MEA1Q16626 185 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 TIGD2Q4W5G0 525 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 ECHDC2Q86YB7 292 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 TMEM151BQ8IW70 566 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 VPS52Q8N1B4 723 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 CPSF7Q8N684 471 aaKnown RBP9.11□□□□□ -0.95
TDP1-201ENST00000335725 HERC2P3Q9BVR0 1158 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 ZNF287Q9HBT7 754 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 FARSBQ9NSD9 589 aaKnown RBP9.11□□□□□ -0.95
TDP1-201ENST00000335725 KLHL42Q9P2K6 505 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 CLEC11AQ9Y240 323 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 USP32Q8NFA0 1604 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 CCDC194A0A1B0GVG4 234 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 K7EPI3 171 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 ENPP3O14638 875 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 SLC5A2P31639 672 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 CXCR5P32302 372 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 CLK3P49761 638 aaKnown RBP9.1□□□□□ -0.95
TDP1-201ENST00000335725 ENTPD1P49961 510 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 KCNC4Q03721 635 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 CDC16Q13042 620 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 MTFR1Q15390 333 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 MAPRE2Q15555 327 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 FOXP4Q8IVH2 680 aaPredicted RBP9.1□□□□□ -0.95
TDP1-201ENST00000335725 CSGALNACT2Q8N6G5 542 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 RIN3Q8TB24 985 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 FERMT1Q9BQL6 677 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 KLHL25Q9H0H3 589 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 DNAJC18Q9H819 358 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 EPB41L4AQ9HCS5 686 aaPredicted RBP9.1□□□□□ -0.95
TDP1-201ENST00000335725 POLMQ9NP87 494 aaPredicted RBP9.1□□□□□ -0.95
TDP1-201ENST00000335725 SEPT11Q9NVA2 429 aaKnown RBP9.1□□□□□ -0.95
TDP1-201ENST00000335725 CAPN11Q9UMQ6 739 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 PCDHGA3Q9Y5H0 932 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 CUL7Q14999 1698 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 A0A1W2PP64 1363 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 CDC42BPBQ9Y5S2 1711 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 SFI1A8K8P3 1242 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 AREL1O15033 823 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 DNAJC6O75061 913 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 ALAS1P13196 640 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 HSPA1LP34931 641 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 COPB1P53618 953 aaKnown RBP9.1□□□□□ -0.95
TDP1-201ENST00000335725 ATP6V0D1P61421 351 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 OLR1P78380 273 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 TAGLNQ01995 201 aaKnown RBP9.1□□□□□ -0.95
TDP1-201ENST00000335725 PDK3Q15120 406 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 IFNLR1Q8IU57 520 aaPredicted RBP9.1□□□□□ -0.95
TDP1-201ENST00000335725 OR6Y1Q8NGX8 325 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 NOX5Q96PH1 765 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 PHF20Q9BVI0 1012 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 ZNF277Q9NRM2 450 aaPredicted RBP9.1□□□□□ -0.95
TDP1-201ENST00000335725 TBK1Q9UHD2 729 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 ERVK-7P63135 1459 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 ACSL4O60488 711 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 ALX3O95076 343 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 KRT5P13647 590 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 RCVRNP35243 200 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 MOGQ16653 247 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 MMEL1Q495T6 779 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 ANKRD20A4Q4UJ75 823 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 CYB5R4Q7L1T6 521 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms