RNA–Protein interactions for RNA: ENST00000215794.7

USP18-201, Transcript of ubiquitin specific peptidase 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP18, Length 2,129 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP18-201ENST00000215794 IGKV6D-21A0A0A0MT36 114 aa19.53■□□□□ 0.72
USP18-201ENST00000215794 ESYT3A0FGR9 886 aa19.53■□□□□ 0.72
USP18-201ENST00000215794 CHRNB2P17787 502 aa19.53■□□□□ 0.72
USP18-201ENST00000215794 RGS2P41220 211 aa19.53■□□□□ 0.72
USP18-201ENST00000215794 ADCYAP1R1P41586 468 aa19.53■□□□□ 0.72
USP18-201ENST00000215794 KCTD19Q17RG1 926 aaPredicted RBP19.53■□□□□ 0.72
USP18-201ENST00000215794 KLHL7Q8IXQ5 586 aa19.53■□□□□ 0.72
USP18-201ENST00000215794 FAM71AQ8IYT1 594 aa19.53■□□□□ 0.72
USP18-201ENST00000215794 FBXL13Q8NEE6 735 aa19.53■□□□□ 0.72
USP18-201ENST00000215794 TMC2Q8TDI7 906 aa19.53■□□□□ 0.72
USP18-201ENST00000215794 ZNF296Q8WUU4 475 aaPredicted RBP19.53■□□□□ 0.72
USP18-201ENST00000215794 LMBR1Q8WVP7 490 aa19.53■□□□□ 0.72
USP18-201ENST00000215794 DHX38Q92620 1227 aaKnown RBP19.53■□□□□ 0.72
USP18-201ENST00000215794 LENG1Q96BZ8 264 aaPredicted RBP19.53■□□□□ 0.72
USP18-201ENST00000215794 PI4K2AQ9BTU6 479 aa19.53■□□□□ 0.72
USP18-201ENST00000215794 HAPLN2Q9GZV7 340 aa19.53■□□□□ 0.72
USP18-201ENST00000215794 KATNBL1Q9H079 304 aa19.53■□□□□ 0.72
USP18-201ENST00000215794 DHX33Q9H6R0 707 aaKnown RBP19.53■□□□□ 0.72
USP18-201ENST00000215794 RAB20Q9NX57 234 aa19.53■□□□□ 0.72
USP18-201ENST00000215794 SUCLA2Q9P2R7 463 aaPredicted RBP19.53■□□□□ 0.72
USP18-201ENST00000215794 CHORDC1Q9UHD1 332 aaPredicted RBP19.53■□□□□ 0.72
USP18-201ENST00000215794 TMEM59LQ9UK28 342 aa19.53■□□□□ 0.72
USP18-201ENST00000215794 NOCTQ9UK39 431 aaKnown RBP19.53■□□□□ 0.72
USP18-201ENST00000215794 ANKRD62A6NC57 917 aa19.52■□□□□ 0.72
USP18-201ENST00000215794 CES2O00748 559 aa19.52■□□□□ 0.72
USP18-201ENST00000215794 FTLP02792 175 aaPredicted RBP19.52■□□□□ 0.72
USP18-201ENST00000215794 EDN1P05305 212 aa19.52■□□□□ 0.72
USP18-201ENST00000215794 GARTP22102 1010 aa19.52■□□□□ 0.72
USP18-201ENST00000215794 LIG4P49917 911 aa19.52■□□□□ 0.72
USP18-201ENST00000215794 GPC3P51654 580 aa19.52■□□□□ 0.72
USP18-201ENST00000215794 TAPT1Q6NXT6 567 aa19.52■□□□□ 0.72
USP18-201ENST00000215794 ZNF771Q7L3S4 317 aaPredicted RBP19.52■□□□□ 0.72
USP18-201ENST00000215794 SYCE1Q8N0S2 351 aa19.52■□□□□ 0.72
USP18-201ENST00000215794 SHC3Q92529 594 aa19.52■□□□□ 0.72
USP18-201ENST00000215794 TATDN2Q93075 761 aa19.52■□□□□ 0.72
USP18-201ENST00000215794 PBKQ96KB5 322 aa19.52■□□□□ 0.72
USP18-201ENST00000215794 MPHOSPH6Q99547 160 aaKnown RBP19.52■□□□□ 0.72
USP18-201ENST00000215794 LRRIQ4A6NIV6 560 aa19.52■□□□□ 0.72
USP18-201ENST00000215794 ADCY6O43306 1168 aa19.52■□□□□ 0.72
USP18-201ENST00000215794 HEXIM1O94992 359 aaKnown RBP19.52■□□□□ 0.72
USP18-201ENST00000215794 NLRP11P59045 1033 aaKnown RBP19.52■□□□□ 0.72
USP18-201ENST00000215794 TRIM32Q13049 653 aa19.52■□□□□ 0.72
USP18-201ENST00000215794 GPS2Q13227 327 aa19.52■□□□□ 0.72
USP18-201ENST00000215794 PRPF4BQ13523 1007 aaKnown RBP19.52■□□□□ 0.72
USP18-201ENST00000215794 SND1Q7KZF4 910 aaKnown RBP eCLIP19.52■□□□□ 0.72
USP18-201ENST00000215794 ZNF516Q92618 1163 aa19.52■□□□□ 0.72
USP18-201ENST00000215794 HES6Q96HZ4 224 aa19.52■□□□□ 0.72
USP18-201ENST00000215794 ZBTB45Q96K62 511 aaPredicted RBP19.52■□□□□ 0.72
USP18-201ENST00000215794 APBA2Q99767 749 aa19.52■□□□□ 0.72
USP18-201ENST00000215794 AP1M1Q9BXS5 423 aa19.52■□□□□ 0.72
USP18-201ENST00000215794 NOC2LQ9Y3T9 749 aaKnown RBP19.52■□□□□ 0.72
USP18-201ENST00000215794 DNAH12Q6ZR08 3092 aa19.51■□□□□ 0.71
USP18-201ENST00000215794 PHACTR2O75167 634 aa19.51■□□□□ 0.71
USP18-201ENST00000215794 GGPS1O95749 300 aa19.51■□□□□ 0.71
USP18-201ENST00000215794 CALCAP01258 141 aa19.51■□□□□ 0.71
USP18-201ENST00000215794 MMEP08473 750 aa19.51■□□□□ 0.71
USP18-201ENST00000215794 MFAP3P55082 362 aa19.51■□□□□ 0.71
USP18-201ENST00000215794 GLE1Q53GS7 698 aaKnown RBP19.51■□□□□ 0.71
USP18-201ENST00000215794 MAMDC4Q6UXC1 1216 aa19.51■□□□□ 0.71
USP18-201ENST00000215794 ACTRT1Q8TDG2 376 aa19.51■□□□□ 0.71
USP18-201ENST00000215794 SOCS4Q8WXH5 440 aa19.51■□□□□ 0.71
USP18-201ENST00000215794 RUBCNQ92622 972 aa19.51■□□□□ 0.71
USP18-201ENST00000215794 VTI1AQ96AJ9 217 aa19.51■□□□□ 0.71
USP18-201ENST00000215794 CFHR5Q9BXR6 569 aa19.51■□□□□ 0.71
USP18-201ENST00000215794 VIPAS39Q9H9C1 493 aa19.51■□□□□ 0.71
USP18-201ENST00000215794 VPS18Q9P253 973 aa19.51■□□□□ 0.71
USP18-201ENST00000215794 AMFRQ9UKV5 643 aa19.51■□□□□ 0.71
USP18-201ENST00000215794 RAD51CO43502 376 aa19.51■□□□□ 0.71
USP18-201ENST00000215794 TXNP10599 105 aaKnown RBP19.51■□□□□ 0.71
USP18-201ENST00000215794 ELNP15502 786 aa19.51■□□□□ 0.71
USP18-201ENST00000215794 ARL2P36404 184 aa19.51■□□□□ 0.71
USP18-201ENST00000215794 ACOT2P49753 483 aa19.51■□□□□ 0.71
USP18-201ENST00000215794 GUCY2DQ02846 1103 aa19.51■□□□□ 0.71
USP18-201ENST00000215794 DRP2Q13474 957 aa19.51■□□□□ 0.71
USP18-201ENST00000215794 ZNF467Q7Z7K2 595 aaPredicted RBP19.51■□□□□ 0.71
USP18-201ENST00000215794 SLC7A3Q8WY07 619 aa19.51■□□□□ 0.71
USP18-201ENST00000215794 TRIB2Q92519 343 aa19.51■□□□□ 0.71
USP18-201ENST00000215794 NT5C1BQ96P26 610 aa19.51■□□□□ 0.71
USP18-201ENST00000215794 NIFKQ9BYG3 293 aaKnown RBP19.51■□□□□ 0.71
USP18-201ENST00000215794 ISCUQ9H1K1 167 aa19.51■□□□□ 0.71
USP18-201ENST00000215794 EPB41L5Q9HCM4 733 aa19.51■□□□□ 0.71
USP18-201ENST00000215794 SLC5A4Q9NY91 659 aa19.51■□□□□ 0.71
USP18-201ENST00000215794 DIS3Q9Y2L1 958 aaKnown RBP19.51■□□□□ 0.71
USP18-201ENST00000215794 FAN1Q9Y2M0 1017 aa19.51■□□□□ 0.71
USP18-201ENST00000215794 ZNF233A6NK53 670 aa19.5■□□□□ 0.71
USP18-201ENST00000215794 ATMINO43313 823 aaPredicted RBP19.5■□□□□ 0.71
USP18-201ENST00000215794 HOXC6P09630 235 aa19.5■□□□□ 0.71
USP18-201ENST00000215794 TCF7P36402 384 aaPredicted RBP19.5■□□□□ 0.71
USP18-201ENST00000215794 CARSP49589 748 aaKnown RBP19.5■□□□□ 0.71
USP18-201ENST00000215794 STRN3Q13033 797 aa19.5■□□□□ 0.71
USP18-201ENST00000215794 TRADDQ15628 312 aa19.5■□□□□ 0.71
USP18-201ENST00000215794 ZBTB41Q5SVQ8 909 aa19.5■□□□□ 0.71
USP18-201ENST00000215794 DEPTORQ8TB45 409 aa19.5■□□□□ 0.71
USP18-201ENST00000215794 SCFD2Q8WU76 684 aa19.5■□□□□ 0.71
USP18-201ENST00000215794 RIN2Q8WYP3 895 aaPredicted RBP19.5■□□□□ 0.71
USP18-201ENST00000215794 PTPRJQ12913 1337 aa19.5■□□□□ 0.71
USP18-201ENST00000215794 PGRMC1O00264 195 aaKnown RBP19.49■□□□□ 0.71
USP18-201ENST00000215794 DDX3YO15523 660 aaKnown RBP19.49■□□□□ 0.71
USP18-201ENST00000215794 EXTL3O43909 919 aa19.49■□□□□ 0.71
USP18-201ENST00000215794 SYF2O95926 243 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms