RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C RSM23Q01163 450 aa7.3□□□□□ -1.24
SRP54YPR088C CTF19Q02732 369 aa7.3□□□□□ -1.24
SRP54YPR088C YMR265CQ03508 461 aaKnown RBP7.3□□□□□ -1.24
SRP54YPR088C YLR352WQ06479 807 aa7.3□□□□□ -1.24
SRP54YPR088C MCT1Q12283 360 aa7.3□□□□□ -1.24
SRP54YPR088C HTZ1Q12692 134 aaKnown RBP7.3□□□□□ -1.24
SRP54YPR088C YLR358CO13565 187 aa7.3□□□□□ -1.24
SRP54YPR088C COX5BP00425 151 aa7.3□□□□□ -1.24
SRP54YPR088C FUR4P05316 633 aaKnown RBP7.3□□□□□ -1.24
SRP54YPR088C GCN3P14741 305 aa7.3□□□□□ -1.24
SRP54YPR088C DBF20P32328 564 aa7.3□□□□□ -1.24
SRP54YPR088C PPG1P32838 368 aa7.3□□□□□ -1.24
SRP54YPR088C SRL3P36167 246 aa7.3□□□□□ -1.24
SRP54YPR088C TAT1P38085 619 aa7.3□□□□□ -1.24
SRP54YPR088C CAT5P41735 233 aa7.3□□□□□ -1.24
SRP54YPR088C NIT3P49954 291 aa7.3□□□□□ -1.24
SRP54YPR088C ELA1P53861 379 aaPredicted RBP7.3□□□□□ -1.24
SRP54YPR088C YAP6Q03935 383 aa7.3□□□□□ -1.24
SRP54YPR088C YPL272CQ08984 517 aa7.3□□□□□ -1.24
SRP54YPR088C ISA2Q12425 185 aa7.3□□□□□ -1.24
SRP54YPR088C MES1P00958 751 aaKnown RBP7.29□□□□□ -1.24
SRP54YPR088C PET18P25362 215 aa7.29□□□□□ -1.24
SRP54YPR088C YBR242WP38331 238 aa7.29□□□□□ -1.24
SRP54YPR088C YHR122WP38829 231 aa7.29□□□□□ -1.24
SRP54YPR088C MTC6P38849 526 aa7.29□□□□□ -1.24
SRP54YPR088C CTK2P46962 323 aa7.29□□□□□ -1.24
SRP54YPR088C GPI14P47088 403 aaKnown RBP7.29□□□□□ -1.24
SRP54YPR088C AIM25P47140 327 aa7.29□□□□□ -1.24
SRP54YPR088C FMP48P53233 369 aa7.29□□□□□ -1.24
SRP54YPR088C TNA1P53322 534 aa7.29□□□□□ -1.24
SRP54YPR088C SRP1Q02821 542 aaKnown RBP7.29□□□□□ -1.24
SRP54YPR088C YDL218WQ07629 317 aa7.29□□□□□ -1.24
SRP54YPR088C SCM3Q12334 223 aa7.29□□□□□ -1.24
SRP54YPR088C PHO2P07269 559 aa7.28□□□□□ -1.24
SRP54YPR088C SGA1P08019 549 aa7.28□□□□□ -1.24
SRP54YPR088C SPS2P08459 502 aa7.28□□□□□ -1.24
SRP54YPR088C HXT2P23585 541 aa7.28□□□□□ -1.24
SRP54YPR088C NAB2P32505 525 aaKnown RBP RIP-Chip data7.28□□□□□ -1.24not detected
SRP54YPR088C CLG1P35190 452 aa7.28□□□□□ -1.24
SRP54YPR088C YMR262WP38430 313 aa7.28□□□□□ -1.24
SRP54YPR088C YIL060WP40519 144 aa7.28□□□□□ -1.24
SRP54YPR088C BUD8P41698 603 aa7.28□□□□□ -1.24
SRP54YPR088C BUD25P85052 153 aa7.28□□□□□ -1.24
SRP54YPR088C RAF1Q06891 181 aa7.28□□□□□ -1.24
SRP54YPR088C THI72Q08579 599 aa7.28□□□□□ -1.24
SRP54YPR088C ENV7Q12003 364 aa7.28□□□□□ -1.24
SRP54YPR088C SRL2Q12020 392 aa7.28□□□□□ -1.24
SRP54YPR088C IZH2Q12442 317 aa7.28□□□□□ -1.24
SRP54YPR088C CHO1P08456 276 aa7.27□□□□□ -1.25
SRP54YPR088C AFG1P32317 509 aa7.27□□□□□ -1.25
SRP54YPR088C STS1P38637 319 aa7.27□□□□□ -1.25
SRP54YPR088C XBP1P40489 647 aa7.27□□□□□ -1.25
SRP54YPR088C UBX6P47049 396 aa7.27□□□□□ -1.25
SRP54YPR088C YJL016WP47072 561 aa7.27□□□□□ -1.25
SRP54YPR088C RNH201P53942 307 aa7.27□□□□□ -1.25
SRP54YPR088C HHT1P61830 136 aa7.27□□□□□ -1.25
SRP54YPR088C MRPL13Q02204 264 aa7.27□□□□□ -1.25
SRP54YPR088C MRPS16Q02608 121 aa7.27□□□□□ -1.25
SRP54YPR088C UTP15Q04305 513 aaKnown RBP7.27□□□□□ -1.25
SRP54YPR088C YPR196WQ06595 470 aa7.27□□□□□ -1.25
SRP54YPR088C TDH3P00359 332 aaKnown RBP RIP-Chip data7.27□□□□□ -1.25not detected
SRP54YPR088C GCD1P09032 578 aaPredicted RBP7.27□□□□□ -1.25
SRP54YPR088C ACH1P32316 526 aa7.27□□□□□ -1.25
SRP54YPR088C RNP1P32385 249 aa7.27□□□□□ -1.25
SRP54YPR088C MRT4P33201 236 aaKnown RBP7.27□□□□□ -1.25
SRP54YPR088C PPZ2P33329 710 aa7.27□□□□□ -1.25
SRP54YPR088C MRPL3P36516 390 aa7.27□□□□□ -1.25
SRP54YPR088C UMP1P38293 148 aa7.27□□□□□ -1.25
SRP54YPR088C SOL3P38858 249 aa7.27□□□□□ -1.25
SRP54YPR088C AVT7P40501 490 aa7.27□□□□□ -1.25
SRP54YPR088C CIN2P46670 268 aa7.27□□□□□ -1.25
SRP54YPR088C YGL159WP53110 370 aa7.27□□□□□ -1.25
SRP54YPR088C MTL1P53214 551 aa7.27□□□□□ -1.25
SRP54YPR088C YGR042WP53227 271 aa7.27□□□□□ -1.25
SRP54YPR088C YNR048WP53740 393 aa7.27□□□□□ -1.25
SRP54YPR088C RCE1Q03530 315 aa7.27□□□□□ -1.25
SRP54YPR088C ODC2Q99297 307 aa7.27□□□□□ -1.25
SRP54YPR088C CDC39P25655 2108 aaKnown RBP7.26□□□□□ -1.25
SRP54YPR088C CDC34P14682 295 aa7.26□□□□□ -1.25
SRP54YPR088C CDC23P16522 626 aa7.26□□□□□ -1.25
SRP54YPR088C ATG22P25568 528 aa7.26□□□□□ -1.25
SRP54YPR088C MSS1P32559 526 aaPredicted RBP7.26□□□□□ -1.25
SRP54YPR088C PTI1P39927 425 aaPredicted RBP7.26□□□□□ -1.25
SRP54YPR088C GPP1P41277 250 aaKnown RBP7.26□□□□□ -1.25
SRP54YPR088C IDP2P41939 412 aa7.26□□□□□ -1.25
SRP54YPR088C BXI1P48558 297 aa7.26□□□□□ -1.25
SRP54YPR088C PHB2P50085 310 aa7.26□□□□□ -1.25
SRP54YPR088C ACS2P52910 683 aaKnown RBP7.26□□□□□ -1.25
SRP54YPR088C RPL6AQ02326 176 aaKnown RBP7.26□□□□□ -1.25
SRP54YPR088C TY1A-MR1Q04215 440 aa7.26□□□□□ -1.25
SRP54YPR088C FSH3Q99369 266 aa7.26□□□□□ -1.25
SRP54YPR088C HEM4P06174 275 aa7.25□□□□□ -1.25
SRP54YPR088C DSF1P0CX08 502 aa7.25□□□□□ -1.25
SRP54YPR088C YNR073CP0CX09 502 aa7.25□□□□□ -1.25
SRP54YPR088C MCM1P11746 286 aa7.25□□□□□ -1.25
SRP54YPR088C RPL30P14120 105 aaKnown RBP7.25□□□□□ -1.25
SRP54YPR088C RPL3P14126 387 aaKnown RBP7.25□□□□□ -1.25
SRP54YPR088C URA6P15700 204 aa7.25□□□□□ -1.25
SRP54YPR088C APL3P38065 1025 aa7.25□□□□□ -1.25
SRP54YPR088C DIE2P50076 525 aa7.25□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms