RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C CTK2P46962 323 aa9.1□□□□□ -0.95
SHM2YLR058C RSM23Q01163 450 aa9.1□□□□□ -0.95
SHM2YLR058C RGC1Q06108 1083 aaKnown RBP9.1□□□□□ -0.95
SHM2YLR058C TPO3Q06451 622 aa9.1□□□□□ -0.95
SHM2YLR058C YOR283WQ12040 230 aaKnown RBP9.1□□□□□ -0.95
SHM2YLR058C ORT1Q12375 292 aa9.1□□□□□ -0.95
SHM2YLR058C CDC39P25655 2108 aaKnown RBP9.09□□□□□ -0.95
SHM2YLR058C SGA1P08019 549 aa9.09□□□□□ -0.95
SHM2YLR058C PRE4P30657 266 aa9.09□□□□□ -0.95
SHM2YLR058C SEN34P39707 275 aa9.09□□□□□ -0.95
SHM2YLR058C ERJ5P43613 295 aaPredicted RBP9.09□□□□□ -0.95
SHM2YLR058C POP6P53218 158 aa9.09□□□□□ -0.95
SHM2YLR058C SLI1P53304 468 aa9.09□□□□□ -0.95
SHM2YLR058C RPL6AQ02326 176 aaKnown RBP9.09□□□□□ -0.95
SHM2YLR058C FRE3Q08905 711 aa9.09□□□□□ -0.95
SHM2YLR058C ISA2Q12425 185 aa9.09□□□□□ -0.95
SHM2YLR058C PDA1P16387 420 aaKnown RBP9.08□□□□□ -0.96
SHM2YLR058C CLG1P35190 452 aa9.08□□□□□ -0.96
SHM2YLR058C MOB2P43563 287 aa9.08□□□□□ -0.96
SHM2YLR058C CIN2P46670 268 aa9.08□□□□□ -0.96
SHM2YLR058C YJL055WP47044 245 aa9.08□□□□□ -0.96
SHM2YLR058C NRK1P53915 240 aa9.08□□□□□ -0.96
SHM2YLR058C TGS1Q12052 315 aa9.08□□□□□ -0.96
SHM2YLR058C KRE6P32486 720 aa9.07□□□□□ -0.96
SHM2YLR058C SNC2P33328 115 aa9.07□□□□□ -0.96
SHM2YLR058C APL3P38065 1025 aa9.07□□□□□ -0.96
SHM2YLR058C HTD2P38790 280 aaKnown RBP9.07□□□□□ -0.96
SHM2YLR058C ATF1P40353 525 aa9.07□□□□□ -0.96
SHM2YLR058C YJL016WP47072 561 aa9.07□□□□□ -0.96
SHM2YLR058C YMR130WQ04223 302 aa9.07□□□□□ -0.96
SHM2YLR058C API2Q04413 109 aa9.07□□□□□ -0.96
SHM2YLR058C FIT3Q08907 204 aa9.07□□□□□ -0.96
SHM2YLR058C YPL199CQ08954 240 aa9.07□□□□□ -0.96
SHM2YLR058C FUR4P05316 633 aaKnown RBP9.06□□□□□ -0.96
SHM2YLR058C MCM1P11746 286 aa9.06□□□□□ -0.96
SHM2YLR058C MRT4P33201 236 aaKnown RBP9.06□□□□□ -0.96
SHM2YLR058C HPA3P39979 161 aa9.06□□□□□ -0.96
SHM2YLR058C QDR1P40475 563 aa9.06□□□□□ -0.96
SHM2YLR058C BUD8P41698 603 aa9.06□□□□□ -0.96
SHM2YLR058C PHB2P50085 310 aa9.06□□□□□ -0.96
SHM2YLR058C SCW4P53334 386 aaKnown RBP9.06□□□□□ -0.96
SHM2YLR058C HHT1P61830 136 aa9.06□□□□□ -0.96
SHM2YLR058C HAS1Q03532 505 aaKnown RBP9.06□□□□□ -0.96
SHM2YLR058C PEX10Q05568 337 aa9.06□□□□□ -0.96
SHM2YLR058C INP53Q12271 1107 aa9.06□□□□□ -0.96
SHM2YLR058C TDH3P00359 332 aaKnown RBP RIP-Chip data9.05□□□□□ -0.96not detected
SHM2YLR058C DSF1P0CX08 502 aa9.05□□□□□ -0.96
SHM2YLR058C YNR073CP0CX09 502 aa9.05□□□□□ -0.96
SHM2YLR058C CAP2P13517 287 aa9.05□□□□□ -0.96
SHM2YLR058C RPI1P23250 407 aaKnown RBP9.05□□□□□ -0.96
SHM2YLR058C SMB1P40018 196 aaKnown RBP9.05□□□□□ -0.96
SHM2YLR058C SIP18P50263 79 aa9.05□□□□□ -0.96
SHM2YLR058C VHT1P53241 593 aa9.05□□□□□ -0.96
SHM2YLR058C RNH201P53942 307 aa9.05□□□□□ -0.96
SHM2YLR058C BUD25P85052 153 aa9.05□□□□□ -0.96
SHM2YLR058C RPL35AP0CX84 120 aaKnown RBP9.05□□□□□ -0.96
SHM2YLR058C RPL35BP0CX85 120 aaKnown RBP9.05□□□□□ -0.96
SHM2YLR058C AFG1P32317 509 aa9.05□□□□□ -0.96
SHM2YLR058C DBF20P32328 564 aa9.05□□□□□ -0.96
SHM2YLR058C YFL051CP43552 160 aa9.05□□□□□ -0.96
SHM2YLR058C YGL159WP53110 370 aa9.05□□□□□ -0.96
SHM2YLR058C FMP48P53233 369 aa9.05□□□□□ -0.96
SHM2YLR058C YNR048WP53740 393 aa9.05□□□□□ -0.96
SHM2YLR058C YLR358CO13565 187 aa9.04□□□□□ -0.96
SHM2YLR058C CYC1P00044 109 aaPredicted RBP9.04□□□□□ -0.96
SHM2YLR058C PUP1P25043 261 aa9.04□□□□□ -0.96
SHM2YLR058C PET18P25362 215 aa9.04□□□□□ -0.96
SHM2YLR058C MTC7P32633 139 aa9.04□□□□□ -0.96
SHM2YLR058C PPZ2P33329 710 aa9.04□□□□□ -0.96
SHM2YLR058C YHL037CP38733 133 aa9.04□□□□□ -0.96
SHM2YLR058C TOK1P40310 691 aa9.04□□□□□ -0.96
SHM2YLR058C YIL060WP40519 144 aa9.04□□□□□ -0.96
SHM2YLR058C SYS1P41544 203 aa9.04□□□□□ -0.96
SHM2YLR058C GPI14P47088 403 aaKnown RBP9.04□□□□□ -0.96
SHM2YLR058C RPA14P50106 137 aa9.04□□□□□ -0.96
SHM2YLR058C TPN1P53099 579 aa9.04□□□□□ -0.96
SHM2YLR058C CTF19Q02732 369 aa9.04□□□□□ -0.96
SHM2YLR058C YDR391CQ04170 232 aa9.04□□□□□ -0.96
SHM2YLR058C KEI1Q06346 221 aa9.04□□□□□ -0.96
SHM2YLR058C RPL30P14120 105 aaKnown RBP9.03□□□□□ -0.96
SHM2YLR058C HXT2P23585 541 aa9.03□□□□□ -0.96
SHM2YLR058C ARO8P53090 500 aaKnown RBP9.03□□□□□ -0.96
SHM2YLR058C MTL1P53214 551 aa9.03□□□□□ -0.96
SHM2YLR058C UMP1P38293 148 aa9.02□□□□□ -0.97
SHM2YLR058C AVT7P40501 490 aa9.02□□□□□ -0.97
SHM2YLR058C CAT5P41735 233 aa9.02□□□□□ -0.97
SHM2YLR058C YIP5P53108 310 aa9.02□□□□□ -0.97
SHM2YLR058C LSM7P53905 115 aaKnown RBP9.02□□□□□ -0.97
SHM2YLR058C ACS1Q01574 713 aa9.02□□□□□ -0.97
SHM2YLR058C YKR005CQ02203 525 aa9.02□□□□□ -0.97
SHM2YLR058C YLR283WQ05867 314 aa9.02□□□□□ -0.97
SHM2YLR058C PHO92Q06390 306 aa9.02□□□□□ -0.97
SHM2YLR058C MRL1Q06815 381 aa9.02□□□□□ -0.97
SHM2YLR058C USB1Q12208 290 aaKnown RBP9.02□□□□□ -0.97
SHM2YLR058C RNH203Q12338 110 aa9.02□□□□□ -0.97
SHM2YLR058C SSA3P09435 649 aaKnown RBP9.01□□□□□ -0.97
SHM2YLR058C ARO3P14843 370 aaKnown RBP9.01□□□□□ -0.97
SHM2YLR058C DEG1P31115 442 aaKnown RBP9.01□□□□□ -0.97
SHM2YLR058C CLB6P32943 380 aa9.01□□□□□ -0.97
SHM2YLR058C TCM62P38228 572 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms