RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W SDS24P38314 527 aa5.09□□□□□ -1.59
VMS1YDR049W NDT80P38830 627 aa5.09□□□□□ -1.59
VMS1YDR049W KRE29P40026 464 aa5.09□□□□□ -1.59
VMS1YDR049W AZF1P41696 914 aa5.09□□□□□ -1.59
VMS1YDR049W TDA10P42938 290 aa5.09□□□□□ -1.59
VMS1YDR049W NMA2P53204 395 aa5.09□□□□□ -1.59
VMS1YDR049W CWC27Q02770 301 aa5.09□□□□□ -1.59
VMS1YDR049W RNY1Q02933 434 aaKnown RBP5.09□□□□□ -1.59
VMS1YDR049W YPR091CQ06833 770 aa5.09□□□□□ -1.59
VMS1YDR049W THI72Q08579 599 aa5.09□□□□□ -1.59
VMS1YDR049W MMT2Q08970 484 aa5.09□□□□□ -1.59
VMS1YDR049W YLR049CQ12110 428 aa5.09□□□□□ -1.59
VMS1YDR049W ORT1Q12375 292 aa5.09□□□□□ -1.59
VMS1YDR049W RIB3Q99258 208 aa5.09□□□□□ -1.59
VMS1YDR049W EXG1P23776 448 aaKnown RBP5.09□□□□□ -1.6
VMS1YDR049W YEF1P32622 495 aa5.09□□□□□ -1.6
VMS1YDR049W SUI1P32911 108 aaKnown RBP5.09□□□□□ -1.6
VMS1YDR049W ECM33P38248 429 aaKnown RBP5.09□□□□□ -1.6
VMS1YDR049W YBR242WP38331 238 aa5.09□□□□□ -1.6
VMS1YDR049W SLM6P38343 150 aa5.09□□□□□ -1.6
VMS1YDR049W CAT8P39113 1433 aa5.09□□□□□ -1.6
VMS1YDR049W RBL2P48606 106 aaKnown RBP5.09□□□□□ -1.6
VMS1YDR049W MUP1P50276 574 aa5.09□□□□□ -1.6
VMS1YDR049W SOL4P53315 255 aa5.09□□□□□ -1.6
VMS1YDR049W NSG2P53898 299 aa5.09□□□□□ -1.6
VMS1YDR049W UBC7Q02159 165 aa5.09□□□□□ -1.6
VMS1YDR049W TRM44Q02648 567 aaKnown RBP5.09□□□□□ -1.6
VMS1YDR049W TDA1Q03533 586 aa5.09□□□□□ -1.6
VMS1YDR049W HNT1Q04344 158 aaKnown RBP5.09□□□□□ -1.6
VMS1YDR049W SWF1Q04629 336 aa5.09□□□□□ -1.6
VMS1YDR049W YPR098CQ06089 161 aa5.09□□□□□ -1.6
VMS1YDR049W GAT3Q07928 141 aa5.09□□□□□ -1.6
VMS1YDR049W SRL2Q12020 392 aa5.09□□□□□ -1.6
VMS1YDR049W USV1Q12132 391 aa5.09□□□□□ -1.6
VMS1YDR049W YLR126CQ12288 251 aa5.09□□□□□ -1.6
VMS1YDR049W SLO1Q3E784 85 aa5.09□□□□□ -1.6
VMS1YDR049W YCL001W-BQ96VH2 84 aa5.09□□□□□ -1.6
VMS1YDR049W BI3Q9ZZW7 517 aa5.09□□□□□ -1.6
VMS1YDR049W SPO14P36126 1683 aa5.08□□□□□ -1.6
VMS1YDR049W GDB1Q06625 1536 aa5.08□□□□□ -1.6
VMS1YDR049W SPO12P17123 173 aa5.08□□□□□ -1.6
VMS1YDR049W SCL1P21243 252 aaKnown RBP5.08□□□□□ -1.6
VMS1YDR049W KAR4P25583 335 aa5.08□□□□□ -1.6
VMS1YDR049W INO2P26798 304 aa5.08□□□□□ -1.6
VMS1YDR049W OCH1P31755 480 aa5.08□□□□□ -1.6
VMS1YDR049W NVJ1P38881 321 aa5.08□□□□□ -1.6
VMS1YDR049W COG7P53195 279 aa5.08□□□□□ -1.6
VMS1YDR049W SPR6Q01684 191 aa5.08□□□□□ -1.6
VMS1YDR049W DML1Q03652 475 aa5.08□□□□□ -1.6
VMS1YDR049W BNA5Q05979 453 aa5.08□□□□□ -1.6
VMS1YDR049W YOL024WQ08172 172 aa5.08□□□□□ -1.6
VMS1YDR049W THP3Q12049 470 aaKnown RBP5.08□□□□□ -1.6
VMS1YDR049W IES3Q12345 250 aa5.08□□□□□ -1.6
VMS1YDR049W GEA2P39993 1459 aaKnown RBP5.08□□□□□ -1.6
VMS1YDR049W CMD1P06787 147 aaKnown RBP5.07□□□□□ -1.6
VMS1YDR049W MET2P08465 486 aa5.07□□□□□ -1.6
VMS1YDR049W ERD1P16151 362 aa5.07□□□□□ -1.6
VMS1YDR049W TRX3P25372 127 aa5.07□□□□□ -1.6
VMS1YDR049W TFC1P32367 649 aa5.07□□□□□ -1.6
VMS1YDR049W SPT4P32914 102 aaPredicted RBP5.07□□□□□ -1.6
VMS1YDR049W MRPL3P36516 390 aa5.07□□□□□ -1.6
VMS1YDR049W YPC1P38298 316 aa5.07□□□□□ -1.6
VMS1YDR049W YPT35P38815 214 aaKnown RBP5.07□□□□□ -1.6
VMS1YDR049W SIM1P40472 476 aa5.07□□□□□ -1.6
VMS1YDR049W GPI14P47088 403 aaKnown RBP5.07□□□□□ -1.6
VMS1YDR049W UBC13P52490 153 aa5.07□□□□□ -1.6
VMS1YDR049W TIM8P57744 87 aa5.07□□□□□ -1.6
VMS1YDR049W YLR012CQ07927 99 aa5.07□□□□□ -1.6
VMS1YDR049W PST2Q12335 198 aaKnown RBP5.07□□□□□ -1.6
VMS1YDR049W UTP23Q12339 254 aaKnown RBP5.07□□□□□ -1.6
VMS1YDR049W RTR2Q12378 196 aa5.07□□□□□ -1.6
VMS1YDR049W YDL199CQ12407 687 aa5.07□□□□□ -1.6
VMS1YDR049W SPO11P23179 398 aa5.07□□□□□ -1.6
VMS1YDR049W FRM2P37261 193 aa5.07□□□□□ -1.6
VMS1YDR049W RIM2P38127 377 aa5.07□□□□□ -1.6
VMS1YDR049W ATG12P38316 186 aa5.07□□□□□ -1.6
VMS1YDR049W LYS1P38998 373 aaRIP-Chip data5.07□□□□□ -1.6not detected
VMS1YDR049W PDS1P40316 373 aaPredicted RBP5.07□□□□□ -1.6
VMS1YDR049W MCM22P47167 239 aa5.07□□□□□ -1.6
VMS1YDR049W SYF2P53277 215 aaPredicted RBP5.07□□□□□ -1.6
VMS1YDR049W COS1P53822 381 aa5.07□□□□□ -1.6
VMS1YDR049W RRP40Q08285 240 aaKnown RBP5.07□□□□□ -1.6
VMS1YDR049W NCA2Q12374 616 aa5.07□□□□□ -1.6
VMS1YDR049W MRX4Q12467 430 aa5.07□□□□□ -1.6
VMS1YDR049W YPR064WQ12492 139 aa5.07□□□□□ -1.6
VMS1YDR049W YPL119C-AQ3E751 87 aa5.07□□□□□ -1.6
VMS1YDR049W YER145C-AA0A023PYF4 145 aa5.06□□□□□ -1.6
VMS1YDR049W FCY2P17064 533 aa5.06□□□□□ -1.6
VMS1YDR049W CPR3P25719 182 aa5.06□□□□□ -1.6
VMS1YDR049W BUB3P26449 341 aa5.06□□□□□ -1.6
VMS1YDR049W FUN26P31381 517 aa5.06□□□□□ -1.6
VMS1YDR049W YBR137WP38276 179 aa5.06□□□□□ -1.6
VMS1YDR049W MAM33P40513 266 aa5.06□□□□□ -1.6
VMS1YDR049W CDC1P40986 491 aa5.06□□□□□ -1.6
VMS1YDR049W MOB2P43563 287 aa5.06□□□□□ -1.6
VMS1YDR049W PMT4P46971 762 aa5.06□□□□□ -1.6
VMS1YDR049W CPR7P47103 393 aa5.06□□□□□ -1.6
VMS1YDR049W ASN1P49089 572 aaKnown RBP5.06□□□□□ -1.6
VMS1YDR049W DID2P69771 204 aa5.06□□□□□ -1.6
VMS1YDR049W RHO3Q00245 231 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 77.4 ms