RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 SPZ1Q9BXG8 430 aa7.12□□□□□ -1.27
LMO3-235ENST00000616247 TXLNGYQ9BZA5 131 aa7.12□□□□□ -1.27
LMO3-235ENST00000616247 ROPN1BQ9BZX4 212 aaPredicted RBP7.12□□□□□ -1.27
LMO3-235ENST00000616247 INTS2Q9H0H0 1204 aaKnown RBP7.12□□□□□ -1.27
LMO3-235ENST00000616247 C12orf65Q9H3J6 166 aaKnown RBP7.12□□□□□ -1.27
LMO3-235ENST00000616247 TRABDQ9H4I3 376 aa7.12□□□□□ -1.27
LMO3-235ENST00000616247 DCLRE1BQ9H816 532 aa7.12□□□□□ -1.27
LMO3-235ENST00000616247 ROPN1Q9HAT0 212 aaPredicted RBP7.12□□□□□ -1.27
LMO3-235ENST00000616247 CHST7Q9NS84 486 aa7.12□□□□□ -1.27
LMO3-235ENST00000616247 PKD2L1Q9P0L9 805 aa7.12□□□□□ -1.27
LMO3-235ENST00000616247 BTNL10A8MVZ5 291 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 MIF4GDA9UHW6 222 aaKnown RBP7.11□□□□□ -1.27
LMO3-235ENST00000616247 CREB3O43889 395 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 ZBED4O75132 1171 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 CDH16O75309 829 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 GABBR2O75899 941 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 ATP5HO75947 161 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 KRT5P13647 590 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 PLS3P13797 630 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 HSPA6P17066 643 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 VCAM1P19320 739 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 PRKCIP41743 596 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 SCNN1BP51168 640 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 RPS8P62241 208 aaKnown RBP7.11□□□□□ -1.27
LMO3-235ENST00000616247 CETN1Q12798 172 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 EDRF1Q3B7T1 1238 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 CCDC62Q6P9F0 684 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 DPP8Q6V1X1 898 aaPredicted RBP7.11□□□□□ -1.27
LMO3-235ENST00000616247 ARHGAP27Q6ZUM4 889 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 RHOT2Q8IXI1 618 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 ZDHHC14Q8IZN3 488 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 HAS1Q92839 578 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 CCDC127Q96BQ5 260 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 HAUS1Q96CS2 278 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 STK33Q9BYT3 514 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 DIS3Q9Y2L1 958 aaKnown RBP7.11□□□□□ -1.27
LMO3-235ENST00000616247 FARP1Q9Y4F1 1045 aaPredicted RBP7.11□□□□□ -1.27
LMO3-235ENST00000616247 MYO3BQ8WXR4 1341 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 SLIT3O75094 1523 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 MYH7P12883 1935 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 A0A0A6YYK5 440 aaPredicted RBP7.11□□□□□ -1.27
LMO3-235ENST00000616247 USP17L10C9JJH3 530 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 LIN7AO14910 233 aaPredicted RBP7.11□□□□□ -1.27
LMO3-235ENST00000616247 RNF8O76064 485 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 CALCAP01258 141 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 BCRP11274 1271 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 GSTT1P30711 240 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 SSTR3P32745 418 aaPredicted RBP7.11□□□□□ -1.27
LMO3-235ENST00000616247 IL6STP40189 918 aaPredicted RBP7.11□□□□□ -1.27
LMO3-235ENST00000616247 FMO5P49326 533 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 CBWD6Q4V339 395 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 TMEM119Q4V9L6 283 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 COBLL1Q53SF7 1204 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 CBWD3Q5JTY5 395 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 CBWD5Q5RIA9 395 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 CEP128Q6ZU80 1094 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 ASRGL1Q7L266 308 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 ZNF564Q8TBZ8 553 aaPredicted RBP7.11□□□□□ -1.27
LMO3-235ENST00000616247 SLC5A5Q92911 643 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 TMX4Q9H1E5 349 aaPredicted RBP7.11□□□□□ -1.27
LMO3-235ENST00000616247 DNAJC18Q9H819 358 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 KCNQ5Q9NR82 932 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 TYW1Q9NV66 732 aaKnown RBP7.11□□□□□ -1.27
LMO3-235ENST00000616247 KLHL11Q9NVR0 708 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 NINJ2Q9NZG7 142 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 LRRC42Q9Y546 428 aa7.11□□□□□ -1.27
LMO3-235ENST00000616247 BAZ2AQ9UIF9 1905 aaKnown RBP7.11□□□□□ -1.27
LMO3-235ENST00000616247 HAUS5O94927 633 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 FGRP09769 529 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 CETPP11597 493 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 WDR4P57081 412 aaKnown RBP7.1□□□□□ -1.27
LMO3-235ENST00000616247 MKRN3Q13064 507 aaKnown RBP7.1□□□□□ -1.27
LMO3-235ENST00000616247 PKN2Q16513 984 aaKnown RBP7.1□□□□□ -1.27
LMO3-235ENST00000616247 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.1□□□□□ -1.27
LMO3-235ENST00000616247 SBK1Q52WX2 424 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 ARSHQ5FYA8 562 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 IZUMO3Q5VZ72 239 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 CATSPER3Q86XQ3 398 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 ANKMY2Q8IV38 441 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 FAM178BQ8IXR5 827 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 SLC25A41Q8N5S1 370 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 ASAP3Q8TDY4 903 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 JDP2Q8WYK2 163 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 SEC14L1Q92503 715 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 KAT5Q92993 513 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 GRAMD1AQ96CP6 724 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 SNF8Q96H20 258 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 RBM15Q96T37 977 aaKnown RBP eCLIP7.1□□□□□ -1.27
LMO3-235ENST00000616247 HEY2Q9UBP5 337 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 ZNF148Q9UQR1 794 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 LRCH1Q9Y2L9 728 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 AKAP11Q9UKA4 1901 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.1□□□□□ -1.27
LMO3-235ENST00000616247 GOLGA8IPA6NC78 632 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 C2orf71A6NGG8 1288 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 GOLGA8JA6NMD2 632 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 ERVV-1B6SEH8 477 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 CYP26A1O43174 497 aa7.1□□□□□ -1.27
LMO3-235ENST00000616247 TAL1P17542 331 aaPredicted RBP7.1□□□□□ -1.27
LMO3-235ENST00000616247 BTDP43251 543 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms