RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 MAPK6Q16659 721 aa19.64■□□□□ 0.73
SSBP1-215ENST00000612337 HAUS3Q68CZ6 603 aa19.64■□□□□ 0.73
SSBP1-215ENST00000612337 B3GALT6Q96L58 329 aa19.64■□□□□ 0.73
SSBP1-215ENST00000612337 KCNK12Q9HB15 430 aa19.64■□□□□ 0.73
SSBP1-215ENST00000612337 CFAP54Q96N23 3096 aa19.64■□□□□ 0.73
SSBP1-215ENST00000612337 CLUHO75153 1309 aa19.63■□□□□ 0.73
SSBP1-215ENST00000612337 SF3B1O75533 1304 aaKnown RBP eCLIP19.63■□□□□ 0.735e-6■■■□□ 17.1
SSBP1-215ENST00000612337 ACKR2O00590 384 aa19.63■□□□□ 0.73
SSBP1-215ENST00000612337 PRKCBP05771 671 aa19.63■□□□□ 0.73
SSBP1-215ENST00000612337 TRAPPC10P48553 1259 aa19.63■□□□□ 0.73
SSBP1-215ENST00000612337 TUSC3Q13454 348 aa19.63■□□□□ 0.73
SSBP1-215ENST00000612337 HSP90AA2PQ14568 343 aaPredicted RBP19.63■□□□□ 0.73
SSBP1-215ENST00000612337 TTC38Q5R3I4 469 aa19.63■□□□□ 0.73
SSBP1-215ENST00000612337 ASTLQ6HA08 431 aaPredicted RBP19.63■□□□□ 0.73
SSBP1-215ENST00000612337 PALB2Q86YC2 1186 aa19.63■□□□□ 0.73
SSBP1-215ENST00000612337 NOSTRINQ8IVI9 506 aa19.63■□□□□ 0.73
SSBP1-215ENST00000612337 TMEM105Q8N8V8 129 aa19.63■□□□□ 0.73
SSBP1-215ENST00000612337 RIN2Q8WYP3 895 aaPredicted RBP19.63■□□□□ 0.73
SSBP1-215ENST00000612337 RABGGTAQ92696 567 aa19.63■□□□□ 0.73
SSBP1-215ENST00000612337 STAMQ92783 540 aa19.63■□□□□ 0.73
SSBP1-215ENST00000612337 ZNF707Q96C28 371 aaPredicted RBP19.63■□□□□ 0.73
SSBP1-215ENST00000612337 ZSCAN31Q96LW9 406 aaPredicted RBP19.63■□□□□ 0.73
SSBP1-215ENST00000612337 CCDC113Q9H0I3 377 aa19.63■□□□□ 0.73
SSBP1-215ENST00000612337 MFSD1Q9H3U5 465 aa19.63■□□□□ 0.73
SSBP1-215ENST00000612337 SNTG2Q9NY99 539 aa19.63■□□□□ 0.73
SSBP1-215ENST00000612337 IGSF9Q9P2J2 1179 aa19.63■□□□□ 0.73
SSBP1-215ENST00000612337 DUSP12Q9UNI6 340 aa19.63■□□□□ 0.73
SSBP1-215ENST00000612337 TGM5O43548 720 aa19.62■□□□□ 0.73
SSBP1-215ENST00000612337 N4BP1O75113 896 aaKnown RBP19.62■□□□□ 0.73
SSBP1-215ENST00000612337 SPATA31D3P0C874 917 aa19.62■□□□□ 0.73
SSBP1-215ENST00000612337 MYBP10242 640 aa19.62■□□□□ 0.73
SSBP1-215ENST00000612337 FXR2P51116 673 aaKnown RBP eCLIP19.62■□□□□ 0.73
SSBP1-215ENST00000612337 CLCN5P51795 746 aa19.62■□□□□ 0.73
SSBP1-215ENST00000612337 PPP2R5AQ15172 486 aa19.62■□□□□ 0.73
SSBP1-215ENST00000612337 TMEM132AQ24JP5 1023 aa19.62■□□□□ 0.73
SSBP1-215ENST00000612337 LILRA6Q6PI73 481 aa19.62■□□□□ 0.73
SSBP1-215ENST00000612337 SPATA31D4Q6ZUB0 917 aa19.62■□□□□ 0.73
SSBP1-215ENST00000612337 DEPTORQ8TB45 409 aa19.62■□□□□ 0.73
SSBP1-215ENST00000612337 SMG7Q92540 1137 aaKnown RBP19.62■□□□□ 0.73
SSBP1-215ENST00000612337 ATOH1Q92858 354 aaPredicted RBP19.62■□□□□ 0.73
SSBP1-215ENST00000612337 PAAF1Q9BRP4 392 aa19.62■□□□□ 0.73
SSBP1-215ENST00000612337 ADPGKQ9BRR6 497 aa19.62■□□□□ 0.73
SSBP1-215ENST00000612337 FAM86C1Q9NVL1 165 aa19.62■□□□□ 0.73
SSBP1-215ENST00000612337 ZDHHC7Q9NXF8 308 aa19.62■□□□□ 0.73
SSBP1-215ENST00000612337 DAXXQ9UER7 740 aaPredicted RBP19.62■□□□□ 0.73
SSBP1-215ENST00000612337 PTGESO14684 152 aa19.61■□□□□ 0.73
SSBP1-215ENST00000612337 RECQL4O94761 1208 aa19.61■□□□□ 0.73
SSBP1-215ENST00000612337 THP07101 528 aa19.61■□□□□ 0.73
SSBP1-215ENST00000612337 GBP2P32456 591 aaPredicted RBP19.61■□□□□ 0.73
SSBP1-215ENST00000612337 CCT6AP40227 531 aaKnown RBP19.61■□□□□ 0.73
SSBP1-215ENST00000612337 GNL2Q13823 731 aaKnown RBP19.61■□□□□ 0.73
SSBP1-215ENST00000612337 ECM1Q16610 540 aa19.61■□□□□ 0.73
SSBP1-215ENST00000612337 RTP2Q5QGT7 225 aa19.61■□□□□ 0.73
SSBP1-215ENST00000612337 C4orf32Q8N8J7 132 aa19.61■□□□□ 0.73
SSBP1-215ENST00000612337 FAM184AQ8NB25 1140 aa19.61■□□□□ 0.73
SSBP1-215ENST00000612337 NT5C3AQ9H0P0 336 aa19.61■□□□□ 0.73
SSBP1-215ENST00000612337 SH2B1Q9NRF2 756 aaPredicted RBP19.61■□□□□ 0.73
SSBP1-215ENST00000612337 EPS15L1Q9UBC2 864 aa19.61■□□□□ 0.73
SSBP1-215ENST00000612337 CACNG4Q9UBN1 327 aa19.61■□□□□ 0.73
SSBP1-215ENST00000612337 NOL7Q9UMY1 257 aaKnown RBP19.61■□□□□ 0.73
SSBP1-215ENST00000612337 DOCK8Q8NF50 2099 aa19.61■□□□□ 0.73
SSBP1-215ENST00000612337 CASTOR2A6NHX0 329 aa19.6■□□□□ 0.73
SSBP1-215ENST00000612337 H0Y858 1186 aa19.6■□□□□ 0.73
SSBP1-215ENST00000612337 EDN1P05305 212 aa19.6■□□□□ 0.73
SSBP1-215ENST00000612337 RPL17P18621 184 aaKnown RBP19.6■□□□□ 0.73
SSBP1-215ENST00000612337 LIG1P18858 919 aa19.6■□□□□ 0.73
SSBP1-215ENST00000612337 EFNA5P52803 228 aa19.6■□□□□ 0.73
SSBP1-215ENST00000612337 NAB2Q15742 525 aa19.6■□□□□ 0.73
SSBP1-215ENST00000612337 DCAF4L1Q3SXM0 396 aa19.6■□□□□ 0.73
SSBP1-215ENST00000612337 GLYCTKQ8IVS8 523 aa19.6■□□□□ 0.73
SSBP1-215ENST00000612337 KIFAP3Q92845 792 aa19.6■□□□□ 0.73
SSBP1-215ENST00000612337 IFT74Q96LB3 600 aa19.6■□□□□ 0.73
SSBP1-215ENST00000612337 TTPALQ9BTX7 342 aa19.6■□□□□ 0.73
SSBP1-215ENST00000612337 PRKD2Q9BZL6 878 aa19.6■□□□□ 0.73
SSBP1-215ENST00000612337 USP20Q9Y2K6 914 aa19.6■□□□□ 0.73
SSBP1-215ENST00000612337 KIF4AO95239 1232 aa19.59■□□□□ 0.73
SSBP1-215ENST00000612337 U2AF2P26368 475 aaKnown RBP eCLIP19.59■□□□□ 0.731e-7■■■■■ 34.9
SSBP1-215ENST00000612337 PDIA5Q14554 519 aa19.59■□□□□ 0.73
SSBP1-215ENST00000612337 NBR1Q14596 966 aa19.59■□□□□ 0.73
SSBP1-215ENST00000612337 FAM171A1Q5VUB5 890 aa19.59■□□□□ 0.73
SSBP1-215ENST00000612337 EEF1DP3Q658K8 133 aa19.59■□□□□ 0.73
SSBP1-215ENST00000612337 CWF19L1Q69YN2 538 aaKnown RBP19.59■□□□□ 0.73
SSBP1-215ENST00000612337 PRSS55Q6UWB4 352 aaPredicted RBP19.59■□□□□ 0.73
SSBP1-215ENST00000612337 HASPINQ8TF76 798 aa19.59■□□□□ 0.73
SSBP1-215ENST00000612337 PIK3R5Q8WYR1 880 aa19.59■□□□□ 0.73
SSBP1-215ENST00000612337 MYADMQ96S97 322 aa19.59■□□□□ 0.73
SSBP1-215ENST00000612337 KIFC3Q9BVG8 833 aa19.59■□□□□ 0.73
SSBP1-215ENST00000612337 CXCL16Q9H2A7 254 aa19.59■□□□□ 0.73
SSBP1-215ENST00000612337 BHMT2Q9H2M3 363 aa19.59■□□□□ 0.73
SSBP1-215ENST00000612337 PIDD1Q9HB75 910 aa19.59■□□□□ 0.73
SSBP1-215ENST00000612337 LRWD1Q9UFC0 647 aa19.59■□□□□ 0.73
SSBP1-215ENST00000612337 KIAA1024Q9UPX6 916 aa19.59■□□□□ 0.73
SSBP1-215ENST00000612337 STK24Q9Y6E0 443 aa19.59■□□□□ 0.73
SSBP1-215ENST00000612337 ELAVL2Q12926 359 aaKnown RBP19.58■□□□□ 0.72
SSBP1-215ENST00000612337 IGSF22Q8N9C0 903 aa19.58■□□□□ 0.72
SSBP1-215ENST00000612337 FLCNQ8NFG4 579 aa19.58■□□□□ 0.72
SSBP1-215ENST00000612337 LNX1Q8TBB1 728 aaPredicted RBP19.58■□□□□ 0.72
SSBP1-215ENST00000612337 NXPE3Q969Y0 559 aa19.58■□□□□ 0.72
SSBP1-215ENST00000612337 KIF2CQ99661 725 aa19.58■□□□□ 0.72
SSBP1-215ENST00000612337 POLD4Q9HCU8 107 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms