RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 SELENOSQ9BQE4 189 aa21.71■■□□□ 1.07
SHKBP1-225ENST00000600733 OSBPL7Q9BZF2 842 aa21.71■■□□□ 1.07
SHKBP1-225ENST00000600733 ZNF277Q9NRM2 450 aaPredicted RBP21.71■■□□□ 1.07
SHKBP1-225ENST00000600733 MTRF1LQ9UGC7 380 aaKnown RBP21.71■■□□□ 1.07
SHKBP1-225ENST00000600733 GTF3C4Q9UKN8 822 aa21.71■■□□□ 1.07
SHKBP1-225ENST00000600733 COL4A5P29400 1685 aa21.71■■□□□ 1.07
SHKBP1-225ENST00000600733 CTNND1O60716 968 aaKnown RBP21.7■■□□□ 1.06
SHKBP1-225ENST00000600733 CHN1P15882 459 aa21.7■■□□□ 1.06
SHKBP1-225ENST00000600733 SLCO1A2P46721 670 aa21.7■■□□□ 1.06
SHKBP1-225ENST00000600733 NPTX2P47972 431 aa21.7■■□□□ 1.06
SHKBP1-225ENST00000600733 PDE6CP51160 858 aa21.7■■□□□ 1.06
SHKBP1-225ENST00000600733 PSMC5P62195 406 aa21.7■■□□□ 1.06
SHKBP1-225ENST00000600733 CDR2Q01850 454 aa21.7■■□□□ 1.06
SHKBP1-225ENST00000600733 PGM5Q15124 567 aa21.7■■□□□ 1.06
SHKBP1-225ENST00000600733 CYP1B1Q16678 543 aa21.7■■□□□ 1.06
SHKBP1-225ENST00000600733 CCDC121Q6ZUS5 278 aa21.7■■□□□ 1.06
SHKBP1-225ENST00000600733 CPLX4Q7Z7G2 160 aa21.7■■□□□ 1.06
SHKBP1-225ENST00000600733 SUGP1Q8IWZ8 645 aaKnown RBP21.7■■□□□ 1.06
SHKBP1-225ENST00000600733 LARGE2Q8N3Y3 721 aa21.7■■□□□ 1.06
SHKBP1-225ENST00000600733 EPS8L3Q8TE67 593 aaKnown RBP21.7■■□□□ 1.06
SHKBP1-225ENST00000600733 MORC4Q8TE76 937 aa21.7■■□□□ 1.06
SHKBP1-225ENST00000600733 ADAM7Q9H2U9 754 aa21.7■■□□□ 1.06
SHKBP1-225ENST00000600733 SRCAPQ6ZRS2 3230 aa21.7■■□□□ 1.06
SHKBP1-225ENST00000600733 DENND3A2RUS2 1198 aa21.69■■□□□ 1.06
SHKBP1-225ENST00000600733 DRD4P21917 467 aa21.69■■□□□ 1.06
SHKBP1-225ENST00000600733 SNRPFP62306 86 aaKnown RBP21.69■■□□□ 1.06
SHKBP1-225ENST00000600733 TMEM8AQ9HCN3 771 aa21.69■■□□□ 1.06
SHKBP1-225ENST00000600733 TCEAL9Q9UHQ7 104 aa21.69■■□□□ 1.06
SHKBP1-225ENST00000600733 MTUS1Q9ULD2 1270 aa21.69■■□□□ 1.06
SHKBP1-225ENST00000600733 RGS16O15492 202 aaPredicted RBP21.69■■□□□ 1.06
SHKBP1-225ENST00000600733 CLDN3O15551 220 aa21.69■■□□□ 1.06
SHKBP1-225ENST00000600733 DLATP10515 647 aaKnown RBP21.69■■□□□ 1.06
SHKBP1-225ENST00000600733 GPC3P51654 580 aa21.69■■□□□ 1.06
SHKBP1-225ENST00000600733 ANO5Q75V66 913 aa21.69■■□□□ 1.06
SHKBP1-225ENST00000600733 CACNA2D3Q8IZS8 1091 aa21.69■■□□□ 1.06
SHKBP1-225ENST00000600733 BSNDQ8WZ55 320 aa21.69■■□□□ 1.06
SHKBP1-225ENST00000600733 DDX1Q92499 740 aaKnown RBP21.69■■□□□ 1.06
SHKBP1-225ENST00000600733 NT5C1BQ96P26 610 aa21.69■■□□□ 1.06
SHKBP1-225ENST00000600733 FAM129AQ9BZQ8 928 aa21.69■■□□□ 1.06
SHKBP1-225ENST00000600733 PARP2Q9UGN5 583 aa21.69■■□□□ 1.06
SHKBP1-225ENST00000600733 PGAP2Q9UHJ9 254 aa21.69■■□□□ 1.06
SHKBP1-225ENST00000600733 TESPA1A2RU30 521 aaPredicted RBP21.68■■□□□ 1.06
SHKBP1-225ENST00000600733 MMP13P45452 471 aa21.68■■□□□ 1.06
SHKBP1-225ENST00000600733 CDR1P51861 262 aa21.68■■□□□ 1.06
SHKBP1-225ENST00000600733 RWDD2BP57060 319 aa21.68■■□□□ 1.06
SHKBP1-225ENST00000600733 GKAP1Q5VSY0 366 aaPredicted RBP21.68■■□□□ 1.06
SHKBP1-225ENST00000600733 SLC39A4Q6P5W5 647 aa21.68■■□□□ 1.06
SHKBP1-225ENST00000600733 CCDC25Q86WR0 208 aa21.68■■□□□ 1.06
SHKBP1-225ENST00000600733 MAP4K3Q8IVH8 894 aa21.68■■□□□ 1.06
SHKBP1-225ENST00000600733 FBXL13Q8NEE6 735 aa21.68■■□□□ 1.06
SHKBP1-225ENST00000600733 CHMP6Q96FZ7 201 aa21.68■■□□□ 1.06
SHKBP1-225ENST00000600733 PI4K2AQ9BTU6 479 aa21.68■■□□□ 1.06
SHKBP1-225ENST00000600733 RAB20Q9NX57 234 aa21.68■■□□□ 1.06
SHKBP1-225ENST00000600733 EXOC7Q9UPT5 735 aa21.68■■□□□ 1.06
SHKBP1-225ENST00000600733 COQ4Q9Y3A0 265 aa21.68■■□□□ 1.06
SHKBP1-225ENST00000600733 WDR64B1ANS9 1081 aa21.68■■□□□ 1.06
SHKBP1-225ENST00000600733 RIPK2O43353 540 aa21.68■■□□□ 1.06
SHKBP1-225ENST00000600733 GRIN3BO60391 1043 aa21.68■■□□□ 1.06
SHKBP1-225ENST00000600733 GBP1P32455 592 aa21.68■■□□□ 1.06
SHKBP1-225ENST00000600733 SMTNP53814 917 aa21.68■■□□□ 1.06
SHKBP1-225ENST00000600733 DMP1Q13316 513 aaPredicted RBP21.68■■□□□ 1.06
SHKBP1-225ENST00000600733 NBPF9Q3BBW0 867 aa21.68■■□□□ 1.06
SHKBP1-225ENST00000600733 RNF207Q6ZRF8 634 aa21.68■■□□□ 1.06
SHKBP1-225ENST00000600733 C1orf54Q8WWF1 131 aa21.68■■□□□ 1.06
SHKBP1-225ENST00000600733 ART4Q93070 314 aa21.68■■□□□ 1.06
SHKBP1-225ENST00000600733 RMDN3Q96TC7 470 aa21.68■■□□□ 1.06
SHKBP1-225ENST00000600733 TIPINQ9BVW5 301 aa21.68■■□□□ 1.06
SHKBP1-225ENST00000600733 SLC38A10Q9HBR0 1119 aa21.68■■□□□ 1.06
SHKBP1-225ENST00000600733 UVRAGQ9P2Y5 699 aa21.68■■□□□ 1.06
SHKBP1-225ENST00000600733 GHRHRQ02643 423 aa21.67■■□□□ 1.06
SHKBP1-225ENST00000600733 FKBP1CQ5VVH2 108 aa21.67■■□□□ 1.06
SHKBP1-225ENST00000600733 FAM83AQ86UY5 434 aa21.67■■□□□ 1.06
SHKBP1-225ENST00000600733 PSPC1Q8WXF1 523 aaKnown RBP21.67■■□□□ 1.06
SHKBP1-225ENST00000600733 CENPTQ96BT3 561 aa21.67■■□□□ 1.06
SHKBP1-225ENST00000600733 TRIM7Q9C029 511 aa21.67■■□□□ 1.06
SHKBP1-225ENST00000600733 KMT5AQ9NQR1 393 aa21.67■■□□□ 1.06
SHKBP1-225ENST00000600733 CNOT7Q9UIV1 285 aaKnown RBP21.67■■□□□ 1.06
SHKBP1-225ENST00000600733 PASKQ96RG2 1323 aa21.67■■□□□ 1.06
SHKBP1-225ENST00000600733 GOLGA6L7A0A1B0GV03 622 aa21.67■■□□□ 1.06
SHKBP1-225ENST00000600733 DNM1LO00429 736 aa21.67■■□□□ 1.06
SHKBP1-225ENST00000600733 WDR46O15213 610 aaKnown RBP21.67■■□□□ 1.06
SHKBP1-225ENST00000600733 KRT5P13647 590 aa21.67■■□□□ 1.06
SHKBP1-225ENST00000600733 SV2AQ7L0J3 742 aa21.67■■□□□ 1.06
SHKBP1-225ENST00000600733 ATXN2LQ8WWM7 1075 aaKnown RBP21.67■■□□□ 1.06
SHKBP1-225ENST00000600733 POMGNT1Q8WZA1 660 aa21.67■■□□□ 1.06
SHKBP1-225ENST00000600733 ECEL1O95672 775 aa21.66■■□□□ 1.06
SHKBP1-225ENST00000600733 JAK3P52333 1124 aa21.66■■□□□ 1.06
SHKBP1-225ENST00000600733 GTF2A1P52655 376 aaPredicted RBP21.66■■□□□ 1.06
SHKBP1-225ENST00000600733 SF3A3Q12874 501 aaKnown RBP eCLIP21.66■■□□□ 1.06
SHKBP1-225ENST00000600733 SNX1Q13596 522 aa21.66■■□□□ 1.06
SHKBP1-225ENST00000600733 PPP1R7Q15435 360 aa21.66■■□□□ 1.06
SHKBP1-225ENST00000600733 ACAD10Q6JQN1 1059 aa21.66■■□□□ 1.06
SHKBP1-225ENST00000600733 ARMC9Q7Z3E5 817 aa21.66■■□□□ 1.06
SHKBP1-225ENST00000600733 PHLDB2Q86SQ0 1253 aa21.66■■□□□ 1.06
SHKBP1-225ENST00000600733 ZNF317Q96PQ6 595 aaPredicted RBP21.66■■□□□ 1.06
SHKBP1-225ENST00000600733 PDCD2LQ9BRP1 358 aa21.66■■□□□ 1.06
SHKBP1-225ENST00000600733 RARGP13631 454 aa21.66■■□□□ 1.06
SHKBP1-225ENST00000600733 MCCD1P59942 119 aaPredicted RBP21.66■■□□□ 1.06
SHKBP1-225ENST00000600733 ADCY2Q08462 1091 aa21.66■■□□□ 1.06
SHKBP1-225ENST00000600733 C6orf118Q5T5N4 469 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms