RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 FGFBP2Q9BYJ0 223 aa21.51■■□□□ 1.03
SHKBP1-214ENST00000597396 GBP3Q9H0R5 595 aa21.51■■□□□ 1.03
SHKBP1-214ENST00000597396 ABLIM1O14639 778 aa21.5■■□□□ 1.03
SHKBP1-214ENST00000597396 PRPF6O94906 941 aaKnown RBP21.5■■□□□ 1.03
SHKBP1-214ENST00000597396 POMCP01189 267 aa21.5■■□□□ 1.03
SHKBP1-214ENST00000597396 PRR29P0C7W0 189 aa21.5■■□□□ 1.03
SHKBP1-214ENST00000597396 SCNN1GP51170 649 aa21.5■■□□□ 1.03
SHKBP1-214ENST00000597396 YARSP54577 528 aaKnown RBP21.5■■□□□ 1.03
SHKBP1-214ENST00000597396 OSTNP61366 133 aa21.5■■□□□ 1.03
SHKBP1-214ENST00000597396 MCL1Q07820 350 aa21.5■■□□□ 1.03
SHKBP1-214ENST00000597396 GPM6BQ13491 265 aa21.5■■□□□ 1.03
SHKBP1-214ENST00000597396 CEP120Q8N960 986 aa21.5■■□□□ 1.03
SHKBP1-214ENST00000597396 ENGASEQ8NFI3 743 aa21.5■■□□□ 1.03
SHKBP1-214ENST00000597396 ZNF558Q96NG5 402 aa21.5■■□□□ 1.03
SHKBP1-214ENST00000597396 C11orf84Q9BUA3 381 aaPredicted RBP21.5■■□□□ 1.03
SHKBP1-214ENST00000597396 C5orf67F2Z3F1 127 aa21.49■■□□□ 1.03
SHKBP1-214ENST00000597396 INPPL1O15357 1258 aa21.49■■□□□ 1.03
SHKBP1-214ENST00000597396 KLRC4O43908 158 aa21.49■■□□□ 1.03
SHKBP1-214ENST00000597396 ZC3H11AO75152 810 aaKnown RBP eCLIP21.49■■□□□ 1.03
SHKBP1-214ENST00000597396 PRPF40AO75400 957 aaKnown RBP21.49■■□□□ 1.03
SHKBP1-214ENST00000597396 AFF1P51825 1210 aaKnown RBP21.49■■□□□ 1.03
SHKBP1-214ENST00000597396 UBE2HP62256 183 aa21.49■■□□□ 1.03
SHKBP1-214ENST00000597396 SNW1Q13573 536 aaKnown RBP21.49■■□□□ 1.03
SHKBP1-214ENST00000597396 POSTNQ15063 836 aa21.49■■□□□ 1.03
SHKBP1-214ENST00000597396 KMT5BQ4FZB7 885 aa21.49■■□□□ 1.03
SHKBP1-214ENST00000597396 ACAP3Q96P50 834 aa21.49■■□□□ 1.03
SHKBP1-214ENST00000597396 TMEM206Q9H813 350 aa21.49■■□□□ 1.03
SHKBP1-214ENST00000597396 SLC39A2Q9NP94 309 aa21.49■■□□□ 1.03
SHKBP1-214ENST00000597396 TOPORSQ9NS56 1045 aaPredicted RBP21.49■■□□□ 1.03
SHKBP1-214ENST00000597396 ATG2AQ2TAZ0 1938 aa21.49■■□□□ 1.03
SHKBP1-214ENST00000597396 ANK1P16157 1881 aa21.48■■□□□ 1.03
SHKBP1-214ENST00000597396 ANKRD63C9JTQ0 380 aa21.48■■□□□ 1.03
SHKBP1-214ENST00000597396 H3BNC9 293 aa21.48■■□□□ 1.03
SHKBP1-214ENST00000597396 EIF3DO15371 548 aaKnown RBP eCLIP21.48■■□□□ 1.03
SHKBP1-214ENST00000597396 KINO60870 393 aaKnown RBP21.48■■□□□ 1.03
SHKBP1-214ENST00000597396 NR1I2O75469 434 aa21.48■■□□□ 1.03
SHKBP1-214ENST00000597396 RPN1P04843 607 aaKnown RBP21.48■■□□□ 1.03
SHKBP1-214ENST00000597396 IGFBP4P22692 258 aa21.48■■□□□ 1.03
SHKBP1-214ENST00000597396 EHHADHQ08426 723 aa21.48■■□□□ 1.03
SHKBP1-214ENST00000597396 KCNA1Q09470 495 aa21.48■■□□□ 1.03
SHKBP1-214ENST00000597396 SLFN12LQ6IEE8 588 aa21.48■■□□□ 1.03
SHKBP1-214ENST00000597396 SLC39A4Q6P5W5 647 aa21.48■■□□□ 1.03
SHKBP1-214ENST00000597396 KCNT2Q6UVM3 1135 aa21.48■■□□□ 1.03
SHKBP1-214ENST00000597396 GLIS3Q8NEA6 775 aa21.48■■□□□ 1.03
SHKBP1-214ENST00000597396 P2RX5Q93086 422 aa21.48■■□□□ 1.03
SHKBP1-214ENST00000597396 TIGD1Q96MW7 591 aa21.48■■□□□ 1.03
SHKBP1-214ENST00000597396 GBP4Q96PP9 640 aa21.48■■□□□ 1.03
SHKBP1-214ENST00000597396 MSTO1Q9BUK6 570 aa21.48■■□□□ 1.03
SHKBP1-214ENST00000597396 HAPLN2Q9GZV7 340 aa21.48■■□□□ 1.03
SHKBP1-214ENST00000597396 NRDE2Q9H7Z3 1164 aa21.48■■□□□ 1.03
SHKBP1-214ENST00000597396 MIOSQ9NXC5 875 aa21.48■■□□□ 1.03
SHKBP1-214ENST00000597396 HOOK1Q9UJC3 728 aaKnown RBP21.48■■□□□ 1.03
SHKBP1-214ENST00000597396 EYSQ5T1H1 3165 aa21.48■■□□□ 1.03
SHKBP1-214ENST00000597396 CHD7Q9P2D1 2997 aa21.48■■□□□ 1.03
SHKBP1-214ENST00000597396 CARNS1A5YM72 827 aa21.47■■□□□ 1.03
SHKBP1-214ENST00000597396 ALDH7A1P49419 539 aaKnown RBP21.47■■□□□ 1.03
SHKBP1-214ENST00000597396 BCAR1P56945 870 aa21.47■■□□□ 1.03
SHKBP1-214ENST00000597396 DPYDQ12882 1025 aa21.47■■□□□ 1.03
SHKBP1-214ENST00000597396 GRIK3Q13003 919 aa21.47■■□□□ 1.03
SHKBP1-214ENST00000597396 PSMD2Q13200 908 aa21.47■■□□□ 1.03
SHKBP1-214ENST00000597396 KYAT1Q16773 422 aa21.47■■□□□ 1.03
SHKBP1-214ENST00000597396 SEZ6Q53EL9 994 aa21.47■■□□□ 1.03
SHKBP1-214ENST00000597396 CLEC17AQ6ZS10 378 aa21.47■■□□□ 1.03
SHKBP1-214ENST00000597396 ZNF280BQ86YH2 543 aa21.47■■□□□ 1.03
SHKBP1-214ENST00000597396 KLHL23Q8NBE8 558 aa21.47■■□□□ 1.03
SHKBP1-214ENST00000597396 PPM1EQ8WY54 764 aa21.47■■□□□ 1.03
SHKBP1-214ENST00000597396 POMGNT1Q8WZA1 660 aa21.47■■□□□ 1.03
SHKBP1-214ENST00000597396 IKZF4Q9H2S9 585 aa21.47■■□□□ 1.03
SHKBP1-214ENST00000597396 UBE4BO95155 1302 aa21.47■■□□□ 1.03
SHKBP1-214ENST00000597396 PRRC2BQ5JSZ5 2229 aaKnown RBP21.46■■□□□ 1.03
SHKBP1-214ENST00000597396 TISP43B9A030 160 aa21.46■■□□□ 1.03
SHKBP1-214ENST00000597396 OGTO15294 1046 aa21.46■■□□□ 1.03
SHKBP1-214ENST00000597396 DDHD2O94830 711 aa21.46■■□□□ 1.03
SHKBP1-214ENST00000597396 PPM1AP35813 382 aa21.46■■□□□ 1.03
SHKBP1-214ENST00000597396 PBX3P40426 434 aa21.46■■□□□ 1.03
SHKBP1-214ENST00000597396 ADGRE1Q14246 886 aa21.46■■□□□ 1.03
SHKBP1-214ENST00000597396 EPM2AIP1Q7L775 607 aaPredicted RBP21.46■■□□□ 1.03
SHKBP1-214ENST00000597396 DNAJB4Q9UDY4 337 aa21.46■■□□□ 1.03
SHKBP1-214ENST00000597396 A0A0B4J269 797 aa21.45■■□□□ 1.02
SHKBP1-214ENST00000597396 LPXNO60711 386 aa21.45■■□□□ 1.02
SHKBP1-214ENST00000597396 ITGB1P05556 798 aa21.45■■□□□ 1.02
SHKBP1-214ENST00000597396 THP07101 528 aa21.45■■□□□ 1.02
SHKBP1-214ENST00000597396 CLTAP09496 248 aa21.45■■□□□ 1.02
SHKBP1-214ENST00000597396 PNOCQ13519 176 aa21.45■■□□□ 1.02
SHKBP1-214ENST00000597396 GSTCDQ8NEC7 633 aa21.45■■□□□ 1.02
SHKBP1-214ENST00000597396 ZNF507Q8TCN5 953 aa21.45■■□□□ 1.02
SHKBP1-214ENST00000597396 TMEM175Q9BSA9 504 aa21.45■■□□□ 1.02
SHKBP1-214ENST00000597396 ALG13Q9NP73 1137 aaKnown RBP21.45■■□□□ 1.02
SHKBP1-214ENST00000597396 SPG21Q9NZD8 308 aa21.45■■□□□ 1.02
SHKBP1-214ENST00000597396 AGO2Q9UKV8 859 aaKnown RBP21.45■■□□□ 1.02
SHKBP1-214ENST00000597396 PLAGL2Q9UPG8 496 aa21.45■■□□□ 1.02
SHKBP1-214ENST00000597396 MYO7AQ13402 2215 aa21.45■■□□□ 1.02
SHKBP1-214ENST00000597396 NT5C1B-RDH14C9J2C7 533 aa21.44■■□□□ 1.02
SHKBP1-214ENST00000597396 PTGESO14684 152 aa21.44■■□□□ 1.02
SHKBP1-214ENST00000597396 B4GALT3O60512 393 aa21.44■■□□□ 1.02
SHKBP1-214ENST00000597396 FGF18O76093 207 aa21.44■■□□□ 1.02
SHKBP1-214ENST00000597396 GALTP07902 379 aa21.44■■□□□ 1.02
SHKBP1-214ENST00000597396 SLC11A1P49279 550 aa21.44■■□□□ 1.02
SHKBP1-214ENST00000597396 PTPROQ16827 1216 aa21.44■■□□□ 1.02
SHKBP1-214ENST00000597396 GLRA4Q5JXX5 417 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms