RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 KLHL23Q8NBE8 558 aa11.42□□□□□ -0.58
SDF2-208ENST00000589788 COLGALT1Q8NBJ5 622 aa11.42□□□□□ -0.58
SDF2-208ENST00000589788 URGCPQ8TCY9 931 aa11.42□□□□□ -0.58
SDF2-208ENST00000589788 EPSTI1Q96J88 318 aa11.42□□□□□ -0.58
SDF2-208ENST00000589788 CLIC6Q96NY7 704 aa11.42□□□□□ -0.58
SDF2-208ENST00000589788 LMAN2LQ9H0V9 348 aa11.42□□□□□ -0.58
SDF2-208ENST00000589788 KMT5AQ9NQR1 393 aa11.42□□□□□ -0.58
SDF2-208ENST00000589788 KCNG1Q9UIX4 513 aa11.42□□□□□ -0.58
SDF2-208ENST00000589788 PLAGL2Q9UPG8 496 aa11.42□□□□□ -0.58
SDF2-208ENST00000589788 INPP5FQ9Y2H2 1132 aa11.42□□□□□ -0.58
SDF2-208ENST00000589788 TCHHQ07283 1943 aa11.42□□□□□ -0.58
SDF2-208ENST00000589788 CNTNAP2Q9UHC6 1331 aa11.42□□□□□ -0.58
SDF2-208ENST00000589788 K7ERI5 159 aa11.41□□□□□ -0.58
SDF2-208ENST00000589788 N4BP3O15049 544 aa11.41□□□□□ -0.58
SDF2-208ENST00000589788 SPTLC2O15270 562 aa11.41□□□□□ -0.58
SDF2-208ENST00000589788 GRM6O15303 877 aa11.41□□□□□ -0.58
SDF2-208ENST00000589788 YEATS4O95619 227 aa11.41□□□□□ -0.58
SDF2-208ENST00000589788 KRT18P05783 430 aaKnown RBP11.41□□□□□ -0.58
SDF2-208ENST00000589788 ITGA4P13612 1032 aa11.41□□□□□ -0.58
SDF2-208ENST00000589788 NCLP19338 710 aaKnown RBP11.41□□□□□ -0.58
SDF2-208ENST00000589788 NPTX2P47972 431 aa11.41□□□□□ -0.58
SDF2-208ENST00000589788 SLC12A3P55017 1021 aa11.41□□□□□ -0.58
SDF2-208ENST00000589788 RNASELQ05823 741 aaKnown RBP11.41□□□□□ -0.58
SDF2-208ENST00000589788 FAM187BQ17R55 369 aa11.41□□□□□ -0.58
SDF2-208ENST00000589788 FOXD4L6Q3SYB3 417 aaPredicted RBP11.41□□□□□ -0.58
SDF2-208ENST00000589788 TIGD5Q53EQ6 642 aa11.41□□□□□ -0.58
SDF2-208ENST00000589788 NOMO2Q5JPE7 1267 aa11.41□□□□□ -0.58
SDF2-208ENST00000589788 PLA2G2CQ5R387 149 aa11.41□□□□□ -0.58
SDF2-208ENST00000589788 FOXD4L3Q6VB84 417 aaPredicted RBP11.41□□□□□ -0.58
SDF2-208ENST00000589788 MRPL10Q7Z7H8 261 aaKnown RBP11.41□□□□□ -0.58
SDF2-208ENST00000589788 GPBP1Q86WP2 473 aa11.41□□□□□ -0.58
SDF2-208ENST00000589788 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.41□□□□□ -0.58
SDF2-208ENST00000589788 RAD54LQ92698 747 aa11.41□□□□□ -0.58
SDF2-208ENST00000589788 FOXJ1Q92949 421 aa11.41□□□□□ -0.58
SDF2-208ENST00000589788 ZNF558Q96NG5 402 aa11.41□□□□□ -0.58
SDF2-208ENST00000589788 ADPGKQ9BRR6 497 aa11.41□□□□□ -0.58
SDF2-208ENST00000589788 KIFC3Q9BVG8 833 aa11.41□□□□□ -0.58
SDF2-208ENST00000589788 EIF2AQ9BY44 585 aaKnown RBP11.41□□□□□ -0.58
SDF2-208ENST00000589788 FZD8Q9H461 694 aa11.41□□□□□ -0.58
SDF2-208ENST00000589788 CWH43Q9H720 699 aa11.41□□□□□ -0.58
SDF2-208ENST00000589788 RSAD1Q9HA92 442 aa11.41□□□□□ -0.58
SDF2-208ENST00000589788 C17orf75Q9HAS0 396 aa11.41□□□□□ -0.58
SDF2-208ENST00000589788 ALG13Q9NP73 1137 aaKnown RBP11.41□□□□□ -0.58
SDF2-208ENST00000589788 UBN1Q9NPG3 1134 aa11.41□□□□□ -0.58
SDF2-208ENST00000589788 IPPQ9Y573 584 aa11.41□□□□□ -0.58
SDF2-208ENST00000589788 MORC2Q9Y6X9 1032 aaPredicted RBP11.41□□□□□ -0.58
SDF2-208ENST00000589788 PHLPP2Q6ZVD8 1323 aa11.41□□□□□ -0.58
SDF2-208ENST00000589788 A0A1B0GUA9 196 aa11.4□□□□□ -0.58
SDF2-208ENST00000589788 MEIS3P2A8K0S8 358 aa11.4□□□□□ -0.58
SDF2-208ENST00000589788 SFI1A8K8P3 1242 aa11.4□□□□□ -0.58
SDF2-208ENST00000589788 ACKR2O00590 384 aa11.4□□□□□ -0.58
SDF2-208ENST00000589788 OFD1O75665 1012 aa11.4□□□□□ -0.58
SDF2-208ENST00000589788 CSPG5O95196 566 aa11.4□□□□□ -0.58
SDF2-208ENST00000589788 NPTXRO95502 500 aa11.4□□□□□ -0.58
SDF2-208ENST00000589788 ITGB1P05556 798 aa11.4□□□□□ -0.58
SDF2-208ENST00000589788 PPM1AP35813 382 aa11.4□□□□□ -0.58
SDF2-208ENST00000589788 ALDH7A1P49419 539 aaKnown RBP11.4□□□□□ -0.58
SDF2-208ENST00000589788 SMTNP53814 917 aa11.4□□□□□ -0.58
SDF2-208ENST00000589788 KCNC4Q03721 635 aa11.4□□□□□ -0.58
SDF2-208ENST00000589788 MAPK7Q13164 816 aa11.4□□□□□ -0.58
SDF2-208ENST00000589788 PKP1Q13835 747 aa11.4□□□□□ -0.58
SDF2-208ENST00000589788 RRAGBQ5VZM2 374 aa11.4□□□□□ -0.58
SDF2-208ENST00000589788 ATL3Q6DD88 541 aa11.4□□□□□ -0.58
SDF2-208ENST00000589788 KCNT2Q6UVM3 1135 aa11.4□□□□□ -0.58
SDF2-208ENST00000589788 AGMOQ6ZNB7 445 aa11.4□□□□□ -0.58
SDF2-208ENST00000589788 LRRC55Q6ZSA7 311 aa11.4□□□□□ -0.58
SDF2-208ENST00000589788 USP49Q70CQ1 688 aa11.4□□□□□ -0.58
SDF2-208ENST00000589788 APBB1IPQ7Z5R6 666 aaPredicted RBP11.4□□□□□ -0.58
SDF2-208ENST00000589788 CDR2LQ86X02 465 aaPredicted RBP11.4□□□□□ -0.58
SDF2-208ENST00000589788 DAW1Q8N136 415 aa11.4□□□□□ -0.58
SDF2-208ENST00000589788 LINC00301Q8NCQ3 95 aa11.4□□□□□ -0.58
SDF2-208ENST00000589788 SMG8Q8ND04 991 aaKnown RBP11.4□□□□□ -0.58
SDF2-208ENST00000589788 LARP4BQ92615 738 aaKnown RBP11.4□□□□□ -0.58
SDF2-208ENST00000589788 FAM193BQ96PV7 902 aaPredicted RBP11.4□□□□□ -0.58
SDF2-208ENST00000589788 APOL6Q9BWW8 343 aa11.4□□□□□ -0.58
SDF2-208ENST00000589788 CCDC113Q9H0I3 377 aa11.4□□□□□ -0.58
SDF2-208ENST00000589788 BLOC1S4Q9NUP1 217 aa11.4□□□□□ -0.58
SDF2-208ENST00000589788 TBC1D13Q9NVG8 400 aa11.4□□□□□ -0.58
SDF2-208ENST00000589788 CHMP5Q9NZZ3 219 aa11.4□□□□□ -0.58
SDF2-208ENST00000589788 LARSQ9P2J5 1176 aaKnown RBP11.4□□□□□ -0.58
SDF2-208ENST00000589788 KANSL3Q9P2N6 904 aa11.4□□□□□ -0.58
SDF2-208ENST00000589788 THEGQ9P2T0 379 aa11.4□□□□□ -0.58
SDF2-208ENST00000589788 STK17AQ9UEE5 414 aa11.4□□□□□ -0.58
SDF2-208ENST00000589788 CHD7Q9P2D1 2997 aa11.4□□□□□ -0.58
SDF2-208ENST00000589788 PLXNA4Q9HCM2 1894 aa11.4□□□□□ -0.58
SDF2-208ENST00000589788 NPHP3-ACAD11A0A0J9YXS1 232 aa11.39□□□□□ -0.59
SDF2-208ENST00000589788 CARNS1A5YM72 827 aa11.39□□□□□ -0.59
SDF2-208ENST00000589788 RNF223E7ERA6 249 aa11.39□□□□□ -0.59
SDF2-208ENST00000589788 H0YCG3 227 aa11.39□□□□□ -0.59
SDF2-208ENST00000589788 SLC16A4O15374 487 aa11.39□□□□□ -0.59
SDF2-208ENST00000589788 ZC3H11AO75152 810 aaKnown RBP eCLIP11.39□□□□□ -0.59
SDF2-208ENST00000589788 PPP6R2O75170 966 aa11.39□□□□□ -0.59
SDF2-208ENST00000589788 TBCAO75347 108 aaKnown RBP11.39□□□□□ -0.59
SDF2-208ENST00000589788 FGF18O76093 207 aa11.39□□□□□ -0.59
SDF2-208ENST00000589788 FAM13AO94988 1023 aa11.39□□□□□ -0.59
SDF2-208ENST00000589788 PLS3P13797 630 aa11.39□□□□□ -0.59
SDF2-208ENST00000589788 NUCB2P80303 420 aa11.39□□□□□ -0.59
SDF2-208ENST00000589788 KRT17Q04695 432 aa11.39□□□□□ -0.59
SDF2-208ENST00000589788 STRN3Q13033 797 aa11.39□□□□□ -0.59
SDF2-208ENST00000589788 ARSHQ5FYA8 562 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms