RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 TMEM161AQ9NX61 479 aa11.36□□□□□ -0.59
CCDC47-203ENST00000580986 ZMYND8Q9ULU4 1186 aaPredicted RBP11.36□□□□□ -0.59
CCDC47-203ENST00000580986 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.36□□□□□ -0.59
CCDC47-203ENST00000580986 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.35□□□□□ -0.59
CCDC47-203ENST00000580986 SYCE3A1L190 88 aa11.35□□□□□ -0.59
CCDC47-203ENST00000580986 ANKRD63C9JTQ0 380 aa11.35□□□□□ -0.59
CCDC47-203ENST00000580986 ENPP3O14638 875 aa11.35□□□□□ -0.59
CCDC47-203ENST00000580986 HOXA2O43364 376 aa11.35□□□□□ -0.59
CCDC47-203ENST00000580986 FGBP02675 491 aa11.35□□□□□ -0.59
CCDC47-203ENST00000580986 ADRB2P07550 413 aa11.35□□□□□ -0.59
CCDC47-203ENST00000580986 SYN1P17600 705 aa11.35□□□□□ -0.59
CCDC47-203ENST00000580986 FKBP3Q00688 224 aaKnown RBP11.35□□□□□ -0.59
CCDC47-203ENST00000580986 TMEM132AQ24JP5 1023 aa11.35□□□□□ -0.59
CCDC47-203ENST00000580986 EEF1DP3Q658K8 133 aa11.35□□□□□ -0.59
CCDC47-203ENST00000580986 ISM2Q6H9L7 571 aa11.35□□□□□ -0.59
CCDC47-203ENST00000580986 C16orf59Q7L2K0 433 aa11.35□□□□□ -0.59
CCDC47-203ENST00000580986 DEFB128Q7Z7B8 93 aa11.35□□□□□ -0.59
CCDC47-203ENST00000580986 ZNF598Q86UK7 904 aaKnown RBP11.35□□□□□ -0.59
CCDC47-203ENST00000580986 RTN4RL1Q86UN2 441 aaPredicted RBP11.35□□□□□ -0.59
CCDC47-203ENST00000580986 ECHDC2Q86YB7 292 aa11.35□□□□□ -0.59
CCDC47-203ENST00000580986 PHOSPHO2Q8TCD6 241 aa11.35□□□□□ -0.59
CCDC47-203ENST00000580986 PGBD4Q96DM1 585 aa11.35□□□□□ -0.59
CCDC47-203ENST00000580986 CPB2Q96IY4 423 aa11.35□□□□□ -0.59
CCDC47-203ENST00000580986 CEP63Q96MT8 703 aa11.35□□□□□ -0.59
CCDC47-203ENST00000580986 TCHPQ9BT92 498 aa11.35□□□□□ -0.59
CCDC47-203ENST00000580986 TRIM6Q9C030 488 aaPredicted RBP11.35□□□□□ -0.59
CCDC47-203ENST00000580986 ANKFY1Q9P2R3 1169 aa11.35□□□□□ -0.59
CCDC47-203ENST00000580986 AGO2Q9UKV8 859 aaKnown RBP11.35□□□□□ -0.59
CCDC47-203ENST00000580986 MAPK8IP1Q9UQF2 711 aa11.35□□□□□ -0.59
CCDC47-203ENST00000580986 PCDHB2Q9Y5E7 798 aa11.35□□□□□ -0.59
CCDC47-203ENST00000580986 C2orf72A6NCS6 295 aa11.34□□□□□ -0.59
CCDC47-203ENST00000580986 IKBKBO14920 756 aa11.34□□□□□ -0.59
CCDC47-203ENST00000580986 SLC16A3O15427 465 aaKnown RBP11.34□□□□□ -0.59
CCDC47-203ENST00000580986 EXTL3O43909 919 aa11.34□□□□□ -0.59
CCDC47-203ENST00000580986 FGFR1OPO95684 399 aaKnown RBP11.34□□□□□ -0.59
CCDC47-203ENST00000580986 NR3C1P04150 777 aa11.34□□□□□ -0.59
CCDC47-203ENST00000580986 CLTAP09496 248 aa11.34□□□□□ -0.59
CCDC47-203ENST00000580986 STAG3L1P0CL83 205 aa11.34□□□□□ -0.59
CCDC47-203ENST00000580986 PRKCSHP14314 528 aaPredicted RBP11.34□□□□□ -0.59
CCDC47-203ENST00000580986 ATF7P17544 494 aaPredicted RBP11.34□□□□□ -0.59
CCDC47-203ENST00000580986 MAGEA10P43363 369 aaPredicted RBP11.34□□□□□ -0.59
CCDC47-203ENST00000580986 WDR5P61964 334 aaKnown RBP11.34□□□□□ -0.59
CCDC47-203ENST00000580986 MLLT1Q03111 559 aaPredicted RBP11.34□□□□□ -0.59
CCDC47-203ENST00000580986 LRSAM1Q6UWE0 723 aa11.34□□□□□ -0.59
CCDC47-203ENST00000580986 NPAS4Q8IUM7 802 aa11.34□□□□□ -0.59
CCDC47-203ENST00000580986 CD302Q8IX05 232 aa11.34□□□□□ -0.59
CCDC47-203ENST00000580986 GPD1LQ8N335 351 aa11.34□□□□□ -0.59
CCDC47-203ENST00000580986 XXYLT1Q8NBI6 393 aa11.34□□□□□ -0.59
CCDC47-203ENST00000580986 ENOX1Q8TC92 643 aaKnown RBP11.34□□□□□ -0.59
CCDC47-203ENST00000580986 NELFBQ8WX92 580 aa11.34□□□□□ -0.59
CCDC47-203ENST00000580986 ZBTB45Q96K62 511 aaPredicted RBP11.34□□□□□ -0.59
CCDC47-203ENST00000580986 SLC9A7Q96T83 725 aa11.34□□□□□ -0.59
CCDC47-203ENST00000580986 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.34□□□□□ -0.59
CCDC47-203ENST00000580986 CBWD1Q9BRT8 395 aa11.34□□□□□ -0.59
CCDC47-203ENST00000580986 MSTO1Q9BUK6 570 aa11.34□□□□□ -0.59
CCDC47-203ENST00000580986 CCDC94Q9BW85 323 aaPredicted RBP11.34□□□□□ -0.59
CCDC47-203ENST00000580986 EIF2AQ9BY44 585 aaKnown RBP11.34□□□□□ -0.59
CCDC47-203ENST00000580986 HAPLN2Q9GZV7 340 aa11.34□□□□□ -0.59
CCDC47-203ENST00000580986 PLEKHA5Q9HAU0 1116 aa11.34□□□□□ -0.59
CCDC47-203ENST00000580986 TOPORSQ9NS56 1045 aaPredicted RBP11.34□□□□□ -0.59
CCDC47-203ENST00000580986 HSPBP1Q9NZL4 362 aa11.34□□□□□ -0.59
CCDC47-203ENST00000580986 CPSF3Q9UKF6 684 aaKnown RBP11.34□□□□□ -0.59
CCDC47-203ENST00000580986 GIT1Q9Y2X7 761 aa11.34□□□□□ -0.59
CCDC47-203ENST00000580986 IPPQ9Y573 584 aa11.34□□□□□ -0.59
CCDC47-203ENST00000580986 CITO14578 2027 aa11.33□□□□□ -0.6
CCDC47-203ENST00000580986 CETN3O15182 167 aa11.33□□□□□ -0.6
CCDC47-203ENST00000580986 NPTXRO95502 500 aa11.33□□□□□ -0.6
CCDC47-203ENST00000580986 GNA14O95837 355 aa11.33□□□□□ -0.6
CCDC47-203ENST00000580986 AMHP03971 560 aa11.33□□□□□ -0.6
CCDC47-203ENST00000580986 NR2F2P24468 414 aa11.33□□□□□ -0.6
CCDC47-203ENST00000580986 PMS1P54277 932 aaKnown RBP11.33□□□□□ -0.6
CCDC47-203ENST00000580986 EPHB4P54760 987 aa11.33□□□□□ -0.6
CCDC47-203ENST00000580986 MARSP56192 900 aaKnown RBP11.33□□□□□ -0.6
CCDC47-203ENST00000580986 TCTN1Q2MV58 587 aa11.33□□□□□ -0.6
CCDC47-203ENST00000580986 XKR4Q5GH76 650 aa11.33□□□□□ -0.6
CCDC47-203ENST00000580986 ANKRD40Q6AI12 368 aa11.33□□□□□ -0.6
CCDC47-203ENST00000580986 LRRC55Q6ZSA7 311 aa11.33□□□□□ -0.6
CCDC47-203ENST00000580986 ZNF365Q70YC5 407 aa11.33□□□□□ -0.6
CCDC47-203ENST00000580986 NT5DC4Q86YG4 428 aa11.33□□□□□ -0.6
CCDC47-203ENST00000580986 SMG8Q8ND04 991 aaKnown RBP11.33□□□□□ -0.6
CCDC47-203ENST00000580986 NOC3LQ8WTT2 800 aaKnown RBP11.33□□□□□ -0.6
CCDC47-203ENST00000580986 TOP1MTQ969P6 601 aa11.33□□□□□ -0.6
CCDC47-203ENST00000580986 DUSP9Q99956 384 aaKnown RBP11.33□□□□□ -0.6
CCDC47-203ENST00000580986 NXF3Q9H4D5 531 aaKnown RBP11.33□□□□□ -0.6
CCDC47-203ENST00000580986 ASB7Q9H672 318 aa11.33□□□□□ -0.6
CCDC47-203ENST00000580986 CTNND2Q9UQB3 1225 aa11.33□□□□□ -0.6
CCDC47-203ENST00000580986 PDCD11Q14690 1871 aaKnown RBP11.32□□□□□ -0.6
CCDC47-203ENST00000580986 TTC26A0AVF1 554 aa11.32□□□□□ -0.6
CCDC47-203ENST00000580986 CARNS1A5YM72 827 aa11.32□□□□□ -0.6
CCDC47-203ENST00000580986 ZNF233A6NK53 670 aa11.32□□□□□ -0.6
CCDC47-203ENST00000580986 TISP43B9A030 160 aa11.32□□□□□ -0.6
CCDC47-203ENST00000580986 IL18RAPO95256 599 aa11.32□□□□□ -0.6
CCDC47-203ENST00000580986 ACRP10323 421 aa11.32□□□□□ -0.6
CCDC47-203ENST00000580986 PSMC2P35998 433 aaKnown RBP11.32□□□□□ -0.6
CCDC47-203ENST00000580986 MATR3P43243 847 aaKnown RBP eCLIP11.32□□□□□ -0.6
CCDC47-203ENST00000580986 KCNJ6P48051 423 aa11.32□□□□□ -0.6
CCDC47-203ENST00000580986 ZNF165P49910 485 aa11.32□□□□□ -0.6
CCDC47-203ENST00000580986 YARSP54577 528 aaKnown RBP11.32□□□□□ -0.6
CCDC47-203ENST00000580986 LSM11P83369 360 aaKnown RBP eCLIP11.32□□□□□ -0.6
CCDC47-203ENST00000580986 MYL5Q02045 173 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms