RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 TMEM192Q8IY95 271 aa17.33■□□□□ 0.36
CSNK1D-212ENST00000580061 CEP63Q96MT8 703 aa17.33■□□□□ 0.36
CSNK1D-212ENST00000580061 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.33■□□□□ 0.367e-9■■■□□ 18.2
CSNK1D-212ENST00000580061 FAM213AQ9BRX8 229 aa17.33■□□□□ 0.36
CSNK1D-212ENST00000580061 SRRTQ9BXP5 876 aaKnown RBP17.33■□□□□ 0.36
CSNK1D-212ENST00000580061 KIAA1586Q9HCI6 787 aa17.33■□□□□ 0.36
CSNK1D-212ENST00000580061 SNTG2Q9NY99 539 aa17.33■□□□□ 0.36
CSNK1D-212ENST00000580061 CPSF3Q9UKF6 684 aaKnown RBP17.33■□□□□ 0.36
CSNK1D-212ENST00000580061 IKBKBO14920 756 aa17.32■□□□□ 0.36
CSNK1D-212ENST00000580061 AKAP3O75969 853 aa17.32■□□□□ 0.36
CSNK1D-212ENST00000580061 CLTAP09496 248 aa17.32■□□□□ 0.36
CSNK1D-212ENST00000580061 ATF7P17544 494 aaPredicted RBP17.32■□□□□ 0.36
CSNK1D-212ENST00000580061 MAGEA10P43363 369 aaPredicted RBP17.32■□□□□ 0.36
CSNK1D-212ENST00000580061 NCAPHQ15003 741 aa17.32■□□□□ 0.36
CSNK1D-212ENST00000580061 IQCB1Q15051 598 aa17.32■□□□□ 0.36
CSNK1D-212ENST00000580061 TPD52L1Q16890 204 aaPredicted RBP17.32■□□□□ 0.36
CSNK1D-212ENST00000580061 CEP135Q66GS9 1140 aa17.32■□□□□ 0.36
CSNK1D-212ENST00000580061 FILIP1Q7Z7B0 1213 aa17.32■□□□□ 0.36
CSNK1D-212ENST00000580061 ZNF598Q86UK7 904 aaKnown RBP17.32■□□□□ 0.36
CSNK1D-212ENST00000580061 CBWD2Q8IUF1 395 aa17.32■□□□□ 0.36
CSNK1D-212ENST00000580061 DHX40Q8IX18 779 aaKnown RBP17.32■□□□□ 0.36
CSNK1D-212ENST00000580061 HACE1Q8IYU2 909 aa17.32■□□□□ 0.36
CSNK1D-212ENST00000580061 AOPEPQ8N6M6 819 aa17.32■□□□□ 0.36
CSNK1D-212ENST00000580061 FAM200AQ8TCP9 573 aa17.32■□□□□ 0.36
CSNK1D-212ENST00000580061 NOC3LQ8WTT2 800 aaKnown RBP17.32■□□□□ 0.36
CSNK1D-212ENST00000580061 PGBD4Q96DM1 585 aa17.32■□□□□ 0.36
CSNK1D-212ENST00000580061 ACAP3Q96P50 834 aa17.32■□□□□ 0.36
CSNK1D-212ENST00000580061 CCDC94Q9BW85 323 aaPredicted RBP17.32■□□□□ 0.36
CSNK1D-212ENST00000580061 RNF39Q9H2S5 420 aa17.32■□□□□ 0.36
CSNK1D-212ENST00000580061 ELAC1Q9H777 363 aaKnown RBP17.32■□□□□ 0.36
CSNK1D-212ENST00000580061 CBX8Q9HC52 389 aa17.32■□□□□ 0.36
CSNK1D-212ENST00000580061 NFE2L3Q9Y4A8 694 aa17.32■□□□□ 0.36
CSNK1D-212ENST00000580061 ZNF233A6NK53 670 aa17.31■□□□□ 0.36
CSNK1D-212ENST00000580061 RECQL4O94761 1208 aa17.31■□□□□ 0.36
CSNK1D-212ENST00000580061 FGFR1OPO95684 399 aaKnown RBP17.31■□□□□ 0.36
CSNK1D-212ENST00000580061 EOMESO95936 686 aa17.31■□□□□ 0.36
CSNK1D-212ENST00000580061 ITGA4P13612 1032 aa17.31■□□□□ 0.36
CSNK1D-212ENST00000580061 AKAP5P24588 427 aa17.31■□□□□ 0.36
CSNK1D-212ENST00000580061 PSMC2P35998 433 aaKnown RBP17.31■□□□□ 0.36
CSNK1D-212ENST00000580061 WDR5P61964 334 aaKnown RBP17.31■□□□□ 0.36
CSNK1D-212ENST00000580061 POU5F1Q01860 360 aaKnown RBP17.31■□□□□ 0.36
CSNK1D-212ENST00000580061 HSP90AA2PQ14568 343 aaPredicted RBP17.31■□□□□ 0.36
CSNK1D-212ENST00000580061 SNRNP35Q16560 246 aaKnown RBP17.31■□□□□ 0.36
CSNK1D-212ENST00000580061 CRIPAKQ8N1N5 446 aa17.31■□□□□ 0.36
CSNK1D-212ENST00000580061 RDH13Q8NBN7 331 aa17.31■□□□□ 0.36
CSNK1D-212ENST00000580061 LPPQ93052 612 aa17.31■□□□□ 0.36
CSNK1D-212ENST00000580061 MKNK1Q9BUB5 465 aa17.31■□□□□ 0.36
CSNK1D-212ENST00000580061 APOL6Q9BWW8 343 aa17.31■□□□□ 0.36
CSNK1D-212ENST00000580061 TMEM161AQ9NX61 479 aa17.31■□□□□ 0.36
CSNK1D-212ENST00000580061 FRMD4BQ9Y2L6 1034 aa17.31■□□□□ 0.36
CSNK1D-212ENST00000580061 TDRD15B5MCY1 1934 aaKnown RBP17.31■□□□□ 0.36
CSNK1D-212ENST00000580061 FNDC1Q4ZHG4 1894 aaPredicted RBP17.31■□□□□ 0.36
CSNK1D-212ENST00000580061 MEIS3P2A8K0S8 358 aa17.3■□□□□ 0.36
CSNK1D-212ENST00000580061 SMTNL1A8MU46 457 aa17.3■□□□□ 0.36
CSNK1D-212ENST00000580061 H0YGN5 161 aa17.3■□□□□ 0.36
CSNK1D-212ENST00000580061 MAPK13O15264 365 aa17.3■□□□□ 0.36
CSNK1D-212ENST00000580061 SLC16A3O15427 465 aaKnown RBP17.3■□□□□ 0.36
CSNK1D-212ENST00000580061 MEFVO15553 781 aaPredicted RBP17.3■□□□□ 0.36
CSNK1D-212ENST00000580061 ADRB2P07550 413 aa17.3■□□□□ 0.36
CSNK1D-212ENST00000580061 IBSPP21815 317 aaPredicted RBP17.3■□□□□ 0.36
CSNK1D-212ENST00000580061 ENOX2Q16206 610 aaKnown RBP17.3■□□□□ 0.36
CSNK1D-212ENST00000580061 SLC10A6Q3KNW5 377 aa17.3■□□□□ 0.36
CSNK1D-212ENST00000580061 AGMOQ6ZNB7 445 aa17.3■□□□□ 0.36
CSNK1D-212ENST00000580061 IRF2BP1Q8IU81 584 aa17.3■□□□□ 0.36
CSNK1D-212ENST00000580061 BRSK2Q8IWQ3 736 aa17.3■□□□□ 0.36
CSNK1D-212ENST00000580061 FAM186BQ8IYM0 893 aa17.3■□□□□ 0.36
CSNK1D-212ENST00000580061 HERVK_113Q902F9 699 aa17.3■□□□□ 0.36
CSNK1D-212ENST00000580061 THAP9Q9H5L6 903 aa17.3■□□□□ 0.36
CSNK1D-212ENST00000580061 RPF1Q9H9Y2 349 aaKnown RBP17.3■□□□□ 0.36
CSNK1D-212ENST00000580061 SAMSN1Q9NSI8 373 aaKnown RBP17.3■□□□□ 0.36
CSNK1D-212ENST00000580061 RNF216Q9NWF9 866 aaPredicted RBP17.3■□□□□ 0.36
CSNK1D-212ENST00000580061 RBAKQ9NYW8 714 aaPredicted RBP17.3■□□□□ 0.36
CSNK1D-212ENST00000580061 BECN2A8MW95 431 aa17.29■□□□□ 0.36
CSNK1D-212ENST00000580061 GNA14O95837 355 aa17.29■□□□□ 0.36
CSNK1D-212ENST00000580061 AMHP03971 560 aa17.29■□□□□ 0.36
CSNK1D-212ENST00000580061 CXCL8P10145 99 aa17.29■□□□□ 0.36
CSNK1D-212ENST00000580061 EPB41P11171 864 aaKnown RBP17.29■□□□□ 0.36
CSNK1D-212ENST00000580061 YARSP54577 528 aaKnown RBP17.29■□□□□ 0.36
CSNK1D-212ENST00000580061 DEFB103AP81534 67 aa17.29■□□□□ 0.36
CSNK1D-212ENST00000580061 LUZP1Q86V48 1076 aa17.29■□□□□ 0.36
CSNK1D-212ENST00000580061 NPAS4Q8IUM7 802 aa17.29■□□□□ 0.36
CSNK1D-212ENST00000580061 RNF169Q8NCN4 708 aa17.29■□□□□ 0.36
CSNK1D-212ENST00000580061 BORCS6Q96GS4 357 aa17.29■□□□□ 0.36
CSNK1D-212ENST00000580061 MFSD14AQ96MC6 490 aa17.29■□□□□ 0.36
CSNK1D-212ENST00000580061 GDF15Q99988 308 aa17.29■□□□□ 0.36
CSNK1D-212ENST00000580061 HSD3B7Q9H2F3 369 aa17.29■□□□□ 0.36
CSNK1D-212ENST00000580061 UBN1Q9NPG3 1134 aa17.29■□□□□ 0.36
CSNK1D-212ENST00000580061 FANCLQ9NW38 375 aa17.29■□□□□ 0.36
CSNK1D-212ENST00000580061 PARP2Q9UGN5 583 aa17.29■□□□□ 0.36
CSNK1D-212ENST00000580061 GIT1Q9Y2X7 761 aa17.29■□□□□ 0.36
CSNK1D-212ENST00000580061 PCDHB7Q9Y5E2 793 aa17.29■□□□□ 0.36
CSNK1D-212ENST00000580061 TTC26A0AVF1 554 aa17.28■□□□□ 0.36
CSNK1D-212ENST00000580061 ZBBXA8MT70 800 aa17.28■□□□□ 0.36
CSNK1D-212ENST00000580061 KCNJ6P48051 423 aa17.28■□□□□ 0.36
CSNK1D-212ENST00000580061 MARSP56192 900 aaKnown RBP17.28■□□□□ 0.36
CSNK1D-212ENST00000580061 WNT7BP56706 349 aa17.28■□□□□ 0.36
CSNK1D-212ENST00000580061 CYP24A1Q07973 514 aa17.28■□□□□ 0.36
CSNK1D-212ENST00000580061 XKR4Q5GH76 650 aa17.28■□□□□ 0.36
CSNK1D-212ENST00000580061 CDKAL1Q5VV42 579 aa17.28■□□□□ 0.36
CSNK1D-212ENST00000580061 ALKAL1Q6UXT8 129 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms