RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-208	ENST00000563911	PPP2R1A	P30153	589 aa		7.37	□□□□□ -1.23
HERPUD1-208	ENST00000563911	ZNF280A	P59817	542 aa	Predicted RBP	7.37	□□□□□ -1.23
HERPUD1-208	ENST00000563911	TTF1	Q15361	905 aa	Predicted RBP	7.37	□□□□□ -1.23
HERPUD1-208	ENST00000563911	EPHA7	Q15375	998 aa		7.37	□□□□□ -1.23
HERPUD1-208	ENST00000563911	KRT24	Q2M2I5	525 aa		7.37	□□□□□ -1.23
HERPUD1-208	ENST00000563911	TEPP	Q6URK8	271 aa		7.37	□□□□□ -1.23
HERPUD1-208	ENST00000563911	FRMD7	Q6ZUT3	714 aa		7.37	□□□□□ -1.23
HERPUD1-208	ENST00000563911	COPS6	Q7L5N1	327 aa		7.37	□□□□□ -1.23
HERPUD1-208	ENST00000563911	PPP1R42	Q7Z4L9	355 aa		7.37	□□□□□ -1.23
HERPUD1-208	ENST00000563911	TBC1D16	Q8TBP0	767 aa		7.37	□□□□□ -1.23
HERPUD1-208	ENST00000563911	ASB15	Q8WXK1	588 aa		7.37	□□□□□ -1.23
HERPUD1-208	ENST00000563911	DCPS	Q96C86	337 aa	Known RBP	7.37	□□□□□ -1.23
HERPUD1-208	ENST00000563911	C16orf92	Q96LL3	132 aa		7.37	□□□□□ -1.23
HERPUD1-208	ENST00000563911	DIRC2	Q96SL1	478 aa		7.37	□□□□□ -1.23
HERPUD1-208	ENST00000563911	ZDHHC5	Q9C0B5	715 aa		7.37	□□□□□ -1.23
HERPUD1-208	ENST00000563911	TOPORS	Q9NS56	1045 aa	Predicted RBP	7.37	□□□□□ -1.23
HERPUD1-208	ENST00000563911	C14orf119	Q9NWQ9	140 aa		7.37	□□□□□ -1.23
HERPUD1-208	ENST00000563911	SIRT5	Q9NXA8	310 aa		7.37	□□□□□ -1.23
HERPUD1-208	ENST00000563911	ARHGAP28	Q9P2N2	729 aa		7.37	□□□□□ -1.23
HERPUD1-208	ENST00000563911	PLA2G2D	Q9UNK4	145 aa		7.37	□□□□□ -1.23
HERPUD1-208	ENST00000563911	LRRC37A	A6NMS7	1700 aa		7.37	□□□□□ -1.23
HERPUD1-208	ENST00000563911	AKAP11	Q9UKA4	1901 aa		7.37	□□□□□ -1.23
HERPUD1-208	ENST00000563911	ANKRD36C	Q5JPF3	1778 aa		7.36	□□□□□ -1.23
HERPUD1-208	ENST00000563911	LCHN	A4D1U4	455 aa		7.36	□□□□□ -1.23
HERPUD1-208	ENST00000563911	GOLGA8A	A7E2F4	631 aa		7.36	□□□□□ -1.23
HERPUD1-208	ENST00000563911	GOLGA8B	A8MQT2	603 aa		7.36	□□□□□ -1.23
HERPUD1-208	ENST00000563911	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	7.36	□□□□□ -1.23
HERPUD1-208	ENST00000563911	GABRD	O14764	452 aa		7.36	□□□□□ -1.23
HERPUD1-208	ENST00000563911	MARCH6	O60337	910 aa		7.36	□□□□□ -1.23
HERPUD1-208	ENST00000563911	KDM1A	O60341	852 aa		7.36	□□□□□ -1.23
HERPUD1-208	ENST00000563911	ASGR2	P07307	311 aa		7.36	□□□□□ -1.23
HERPUD1-208	ENST00000563911	TMEM253	P0C7T8	217 aa		7.36	□□□□□ -1.23
HERPUD1-208	ENST00000563911	JUNB	P17275	347 aa	Predicted RBP	7.36	□□□□□ -1.23
HERPUD1-208	ENST00000563911	ITGB5	P18084	799 aa		7.36	□□□□□ -1.23
HERPUD1-208	ENST00000563911	EIF2S2	P20042	333 aa	Known RBP	7.36	□□□□□ -1.23
HERPUD1-208	ENST00000563911	IRAK1	P51617	712 aa		7.36	□□□□□ -1.23
HERPUD1-208	ENST00000563911	SCAND1	P57086	179 aa		7.36	□□□□□ -1.23
HERPUD1-208	ENST00000563911	NKX3-2	P78367	333 aa		7.36	□□□□□ -1.23
HERPUD1-208	ENST00000563911	ADCY1	Q08828	1119 aa		7.36	□□□□□ -1.23
HERPUD1-208	ENST00000563911	DBP	Q10586	325 aa	Predicted RBP	7.36	□□□□□ -1.23
HERPUD1-208	ENST00000563911	TCIRG1	Q13488	830 aa		7.36	□□□□□ -1.23
HERPUD1-208	ENST00000563911	PARP10	Q53GL7	1025 aa		7.36	□□□□□ -1.23
HERPUD1-208	ENST00000563911	FBXO46	Q6PJ61	603 aa	Predicted RBP	7.36	□□□□□ -1.23
HERPUD1-208	ENST00000563911	ZC3H18	Q86VM9	953 aa	Known RBP	7.36	□□□□□ -1.23
HERPUD1-208	ENST00000563911	FAM26E	Q8N5C1	309 aa		7.36	□□□□□ -1.23
HERPUD1-208	ENST00000563911	NSUN3	Q9H649	340 aa	Known RBP	7.36	□□□□□ -1.23
HERPUD1-208	ENST00000563911	NGRN	Q9NPE2	291 aa	Known RBP	7.36	□□□□□ -1.23
HERPUD1-208	ENST00000563911	MSRA	Q9UJ68	235 aa		7.36	□□□□□ -1.23
HERPUD1-208	ENST00000563911		K7ESF4	209 aa		7.35	□□□□□ -1.23
HERPUD1-208	ENST00000563911	FBXO21	O94952	628 aa		7.35	□□□□□ -1.23
HERPUD1-208	ENST00000563911	MYBL2	P10244	700 aa		7.35	□□□□□ -1.23
HERPUD1-208	ENST00000563911	NCAM1	P13591	858 aa		7.35	□□□□□ -1.23
HERPUD1-208	ENST00000563911	RPS12	P25398	132 aa	Known RBP	7.35	□□□□□ -1.23
HERPUD1-208	ENST00000563911	NEK2	P51955	445 aa		7.35	□□□□□ -1.23
HERPUD1-208	ENST00000563911	ERVK-21	P61565	698 aa		7.35	□□□□□ -1.23
HERPUD1-208	ENST00000563911	AIMP1	Q12904	312 aa	Known RBP	7.35	□□□□□ -1.23
HERPUD1-208	ENST00000563911	KLF1	Q13351	362 aa	Predicted RBP	7.35	□□□□□ -1.23
HERPUD1-208	ENST00000563911	SF3B3	Q15393	1217 aa	Known RBP	7.35	□□□□□ -1.23
HERPUD1-208	ENST00000563911	PKN2	Q16513	984 aa	Known RBP	7.35	□□□□□ -1.23
HERPUD1-208	ENST00000563911	CD276	Q5ZPR3	534 aa		7.35	□□□□□ -1.23
HERPUD1-208	ENST00000563911	FAM89A	Q96GI7	184 aa		7.35	□□□□□ -1.23
HERPUD1-208	ENST00000563911	PCGF6	Q9BYE7	350 aa		7.35	□□□□□ -1.23
HERPUD1-208	ENST00000563911	DCP1A	Q9NPI6	582 aa	Predicted RBP	7.35	□□□□□ -1.23
HERPUD1-208	ENST00000563911	TCEAL9	Q9UHQ7	104 aa		7.35	□□□□□ -1.23
HERPUD1-208	ENST00000563911	TRMT112	Q9UI30	125 aa	Known RBP	7.35	□□□□□ -1.23
HERPUD1-208	ENST00000563911	KCNG1	Q9UIX4	513 aa		7.35	□□□□□ -1.23
HERPUD1-208	ENST00000563911	HDAC9	Q9UKV0	1011 aa		7.35	□□□□□ -1.23
HERPUD1-208	ENST00000563911	ASB1	Q9Y576	335 aa		7.35	□□□□□ -1.23
HERPUD1-208	ENST00000563911	DDX60	Q8IY21	1712 aa	Known RBP	7.35	□□□□□ -1.23
HERPUD1-208	ENST00000563911	UBA6	A0AVT1	1052 aa	Predicted RBP	7.34	□□□□□ -1.23
HERPUD1-208	ENST00000563911	GOLGA6L22	H0YM25	854 aa		7.34	□□□□□ -1.23
HERPUD1-208	ENST00000563911	ENO2	P09104	434 aa	Predicted RBP	7.34	□□□□□ -1.23
HERPUD1-208	ENST00000563911	AOAH	P28039	575 aa		7.34	□□□□□ -1.23
HERPUD1-208	ENST00000563911	EPHB1	P54762	984 aa		7.34	□□□□□ -1.23
HERPUD1-208	ENST00000563911	NCKAP1L	P55160	1127 aa		7.34	□□□□□ -1.23
HERPUD1-208	ENST00000563911	TARBP2	Q15633	366 aa	Known RBP	7.34	□□□□□ -1.23
HERPUD1-208	ENST00000563911	ABCB5	Q2M3G0	1257 aa		7.34	□□□□□ -1.23
HERPUD1-208	ENST00000563911	CR1L	Q2VPA4	569 aa		7.34	□□□□□ -1.23
HERPUD1-208	ENST00000563911	PRR23B	Q6ZRT6	265 aa		7.34	□□□□□ -1.23
HERPUD1-208	ENST00000563911	CMIP	Q8IY22	773 aa		7.34	□□□□□ -1.23
HERPUD1-208	ENST00000563911	C7orf31	Q8N865	590 aa		7.34	□□□□□ -1.23
HERPUD1-208	ENST00000563911	E2F7	Q96AV8	911 aa		7.34	□□□□□ -1.23
HERPUD1-208	ENST00000563911	TUBGCP5	Q96RT8	1024 aa		7.34	□□□□□ -1.23
HERPUD1-208	ENST00000563911	ISCA1	Q9BUE6	129 aa		7.34	□□□□□ -1.23
HERPUD1-208	ENST00000563911	EPB41L4B	Q9H329	900 aa		7.34	□□□□□ -1.23
HERPUD1-208	ENST00000563911	SLC39A2	Q9NP94	309 aa		7.34	□□□□□ -1.23
HERPUD1-208	ENST00000563911	AASDHPPT	Q9NRN7	309 aa		7.34	□□□□□ -1.23
HERPUD1-208	ENST00000563911	UCKL1	Q9NWZ5	548 aa		7.34	□□□□□ -1.23
HERPUD1-208	ENST00000563911	FAM53C	Q9NYF3	392 aa		7.34	□□□□□ -1.23
HERPUD1-208	ENST00000563911	HSPBP1	Q9NZL4	362 aa		7.34	□□□□□ -1.23
HERPUD1-208	ENST00000563911	RBPJL	Q9UBG7	517 aa		7.34	□□□□□ -1.23
HERPUD1-208	ENST00000563911	SPEF1	Q9Y4P9	236 aa		7.34	□□□□□ -1.23
HERPUD1-208	ENST00000563911	DLG5	Q8TDM6	1919 aa		7.34	□□□□□ -1.23
HERPUD1-208	ENST00000563911	PAPPA2	Q9BXP8	1791 aa		7.33	□□□□□ -1.24
HERPUD1-208	ENST00000563911	RANBP2	P49792	3224 aa	Known RBP	7.33	□□□□□ -1.24
HERPUD1-208	ENST00000563911	TNKS	O95271	1327 aa		7.33	□□□□□ -1.24
HERPUD1-208	ENST00000563911	AOX1	Q06278	1338 aa		7.33	□□□□□ -1.24
HERPUD1-208	ENST00000563911	SH3TC1	Q8TE82	1336 aa		7.33	□□□□□ -1.24
HERPUD1-208	ENST00000563911	APOL3	O95236	402 aa		7.33	□□□□□ -1.24
HERPUD1-208	ENST00000563911	PARN	O95453	639 aa	Known RBP	7.33	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms