RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 IL2RBP14784 551 aa6.27□□□□□ -1.41
USP8-218ENST00000561330 PTH1RQ03431 593 aa6.27□□□□□ -1.41
USP8-218ENST00000561330 SP140Q13342 867 aa6.27□□□□□ -1.41
USP8-218ENST00000561330 ZXDCQ2QGD7 858 aaPredicted RBP6.27□□□□□ -1.41
USP8-218ENST00000561330 ANKS6Q68DC2 871 aa6.27□□□□□ -1.41
USP8-218ENST00000561330 RNF207Q6ZRF8 634 aa6.27□□□□□ -1.41
USP8-218ENST00000561330 SPRED1Q7Z699 444 aa6.27□□□□□ -1.41
USP8-218ENST00000561330 C1orf210Q8IVY1 113 aa6.27□□□□□ -1.41
USP8-218ENST00000561330 OR52N2Q8NGI0 321 aa6.27□□□□□ -1.41
USP8-218ENST00000561330 STON2Q8WXE9 905 aa6.27□□□□□ -1.41
USP8-218ENST00000561330 HDAC10Q969S8 669 aa6.27□□□□□ -1.41
USP8-218ENST00000561330 PGBD4Q96DM1 585 aa6.27□□□□□ -1.41
USP8-218ENST00000561330 KRTAP4-2Q9BYR5 136 aa6.27□□□□□ -1.41
USP8-218ENST00000561330 CPEB1Q9BZB8 566 aaKnown RBP6.27□□□□□ -1.41
USP8-218ENST00000561330 SPON1Q9HCB6 807 aa6.27□□□□□ -1.41
USP8-218ENST00000561330 TMEM140Q9NV12 185 aa6.27□□□□□ -1.41
USP8-218ENST00000561330 MOCS1Q9NZB8 636 aa6.27□□□□□ -1.41
USP8-218ENST00000561330 SIK3Q9Y2K2 1263 aa6.27□□□□□ -1.41
USP8-218ENST00000561330 KLRG2A4D1S0 409 aaPredicted RBP6.26□□□□□ -1.41
USP8-218ENST00000561330 TBKBP1A7MCY6 615 aa6.26□□□□□ -1.41
USP8-218ENST00000561330 PLSCR1O15162 318 aa6.26□□□□□ -1.41
USP8-218ENST00000561330 ALDH1L1O75891 902 aa6.26□□□□□ -1.41
USP8-218ENST00000561330 ALOX15P16050 662 aaPredicted RBP6.26□□□□□ -1.41
USP8-218ENST00000561330 SLC6A9P48067 706 aa6.26□□□□□ -1.41
USP8-218ENST00000561330 ADKP55263 362 aaKnown RBP6.26□□□□□ -1.41
USP8-218ENST00000561330 VPS72Q15906 364 aa6.26□□□□□ -1.41
USP8-218ENST00000561330 C1QL3Q5VWW1 255 aa6.26□□□□□ -1.41
USP8-218ENST00000561330 NAIF1Q69YI7 327 aaPredicted RBP6.26□□□□□ -1.41
USP8-218ENST00000561330 EFCAB12Q6NXP0 572 aa6.26□□□□□ -1.41
USP8-218ENST00000561330 DBX2Q6ZNG2 339 aa6.26□□□□□ -1.41
USP8-218ENST00000561330 HTR3DQ70Z44 454 aa6.26□□□□□ -1.41
USP8-218ENST00000561330 MIGA2Q7L4E1 593 aa6.26□□□□□ -1.41
USP8-218ENST00000561330 GPRIN1Q7Z2K8 1008 aa6.26□□□□□ -1.41
USP8-218ENST00000561330 TMPRSS6Q8IU80 811 aa6.26□□□□□ -1.41
USP8-218ENST00000561330 RHOT1Q8IXI2 618 aa6.26□□□□□ -1.41
USP8-218ENST00000561330 IL17DQ8TAD2 202 aa6.26□□□□□ -1.41
USP8-218ENST00000561330 CCHCR1Q8TD31 782 aa6.26□□□□□ -1.41
USP8-218ENST00000561330 COA7Q96BR5 231 aa6.26□□□□□ -1.41
USP8-218ENST00000561330 AASDHPPTQ9NRN7 309 aa6.26□□□□□ -1.41
USP8-218ENST00000561330 AJAP1Q9UKB5 411 aaPredicted RBP6.26□□□□□ -1.41
USP8-218ENST00000561330 XDHP47989 1333 aa6.25□□□□□ -1.41
USP8-218ENST00000561330 CCDC154A6NI56 674 aa6.25□□□□□ -1.41
USP8-218ENST00000561330 SNRPA1P09661 255 aaKnown RBP6.25□□□□□ -1.41
USP8-218ENST00000561330 RAP2AP10114 183 aa6.25□□□□□ -1.41
USP8-218ENST00000561330 GUCY1A2P33402 732 aa6.25□□□□□ -1.41
USP8-218ENST00000561330 PUM1Q14671 1186 aaKnown RBP eCLIP6.25□□□□□ -1.41
USP8-218ENST00000561330 BMT2Q1RMZ1 405 aa6.25□□□□□ -1.41
USP8-218ENST00000561330 UAP1L1Q3KQV9 507 aa6.25□□□□□ -1.41
USP8-218ENST00000561330 AFMIDQ63HM1 303 aa6.25□□□□□ -1.41
USP8-218ENST00000561330 ANKRD13AQ8IZ07 590 aa6.25□□□□□ -1.41
USP8-218ENST00000561330 MIER2Q8N344 545 aa6.25□□□□□ -1.41
USP8-218ENST00000561330 ZFP28Q8NHY6 868 aa6.25□□□□□ -1.41
USP8-218ENST00000561330 CASKIN2Q8WXE0 1202 aa6.25□□□□□ -1.41
USP8-218ENST00000561330 TFAP2CQ92754 450 aa6.25□□□□□ -1.41
USP8-218ENST00000561330 CSRNP2Q9H175 543 aa6.25□□□□□ -1.41
USP8-218ENST00000561330 KCNH6Q9H252 994 aa6.25□□□□□ -1.41
USP8-218ENST00000561330 PARPBPQ9NWS1 579 aa6.25□□□□□ -1.41
USP8-218ENST00000561330 LUC7L2Q9Y383 392 aaKnown RBP6.25□□□□□ -1.41
USP8-218ENST00000561330 ATRNL1Q5VV63 1379 aa6.25□□□□□ -1.41
USP8-218ENST00000561330 CXorf49A8MYA2 514 aaPredicted RBP6.24□□□□□ -1.41
USP8-218ENST00000561330 PJA2O43164 708 aa6.24□□□□□ -1.41
USP8-218ENST00000561330 HTRA2O43464 458 aaPredicted RBP6.24□□□□□ -1.41
USP8-218ENST00000561330 GPR32O75388 356 aa6.24□□□□□ -1.41
USP8-218ENST00000561330 MGAT1P26572 445 aa6.24□□□□□ -1.41
USP8-218ENST00000561330 CLRN1P58418 232 aa6.24□□□□□ -1.41
USP8-218ENST00000561330 TTF1Q15361 905 aaPredicted RBP6.24□□□□□ -1.41
USP8-218ENST00000561330 RRP12Q5JTH9 1297 aaKnown RBP6.24□□□□□ -1.41
USP8-218ENST00000561330 TMEM240Q5SV17 173 aa6.24□□□□□ -1.41
USP8-218ENST00000561330 DRICH1Q6PGQ1 229 aaPredicted RBP6.24□□□□□ -1.41
USP8-218ENST00000561330 CMTR2Q8IYT2 770 aaKnown RBP6.24□□□□□ -1.41
USP8-218ENST00000561330 SLC35B2Q8TB61 432 aa6.24□□□□□ -1.41
USP8-218ENST00000561330 HOOK2Q96ED9 719 aa6.24□□□□□ -1.41
USP8-218ENST00000561330 ZNF703Q9H7S9 590 aaPredicted RBP6.24□□□□□ -1.41
USP8-218ENST00000561330 POGKQ9P215 609 aa6.24□□□□□ -1.41
USP8-218ENST00000561330 LIMCH1Q9UPQ0 1083 aa6.24□□□□□ -1.41
USP8-218ENST00000561330 IPPQ9Y573 584 aa6.24□□□□□ -1.41
USP8-218ENST00000561330 PCDHA13Q9Y5I0 950 aa6.24□□□□□ -1.41
USP8-218ENST00000561330 MYBBP1AQ9BQG0 1328 aaKnown RBP6.24□□□□□ -1.41
USP8-218ENST00000561330 TEX33O43247 280 aa6.23□□□□□ -1.41
USP8-218ENST00000561330 ZRANB2O95218 330 aaKnown RBP eCLIP6.23□□□□□ -1.411e-8■■■■■ 56
USP8-218ENST00000561330 IL33O95760 270 aa6.23□□□□□ -1.41
USP8-218ENST00000561330 AMY1AP04745 511 aa6.23□□□□□ -1.41
USP8-218ENST00000561330 ATP5JP18859 108 aa6.23□□□□□ -1.41
USP8-218ENST00000561330 FPR1P21462 350 aa6.23□□□□□ -1.41
USP8-218ENST00000561330 C3orf36Q3SXR2 165 aa6.23□□□□□ -1.41
USP8-218ENST00000561330 RSPH3Q86UC2 560 aa6.23□□□□□ -1.41
USP8-218ENST00000561330 CPA6Q8N4T0 437 aa6.23□□□□□ -1.41
USP8-218ENST00000561330 OR10H5Q8NGA6 315 aa6.23□□□□□ -1.41
USP8-218ENST00000561330 PLEKHG4BQ96PX9 1271 aa6.23□□□□□ -1.41
USP8-218ENST00000561330 MRI1Q9BV20 369 aa6.23□□□□□ -1.41
USP8-218ENST00000561330 TDP1Q9NUW8 608 aa6.23□□□□□ -1.41
USP8-218ENST00000561330 EIF2B4Q9UI10 523 aaKnown RBP6.23□□□□□ -1.41
USP8-218ENST00000561330 SERPINB13Q9UIV8 391 aa6.23□□□□□ -1.41
USP8-218ENST00000561330 ACTL7AQ9Y615 435 aa6.23□□□□□ -1.41
USP8-218ENST00000561330 WNT10BO00744 389 aa6.22□□□□□ -1.41
USP8-218ENST00000561330 AMHP03971 560 aa6.22□□□□□ -1.41
USP8-218ENST00000561330 RPLP2P05387 115 aaKnown RBP6.22□□□□□ -1.41
USP8-218ENST00000561330 DDCP20711 480 aa6.22□□□□□ -1.41
USP8-218ENST00000561330 EDNRBP24530 442 aa6.22□□□□□ -1.41
USP8-218ENST00000561330 PCSK1P29120 753 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms