RNA–Protein interactions for RNA: ENST00000561321.1

SEMA4B-220, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-220ENST00000561321 KLHL5Q96PQ7 755 aa13.55□□□□□ -0.24
SEMA4B-220ENST00000561321 PAAF1Q9BRP4 392 aa13.55□□□□□ -0.24
SEMA4B-220ENST00000561321 LRFN3Q9BTN0 628 aa13.55□□□□□ -0.24
SEMA4B-220ENST00000561321 TIPINQ9BVW5 301 aa13.55□□□□□ -0.24
SEMA4B-220ENST00000561321 C11orf16Q9NQ32 467 aa13.55□□□□□ -0.24
SEMA4B-220ENST00000561321 TSHZ2Q9NRE2 1034 aa13.55□□□□□ -0.24
SEMA4B-220ENST00000561321 CLIC4Q9Y696 253 aa13.55□□□□□ -0.24
SEMA4B-220ENST00000561321 ZMYM2Q9UBW7 1377 aa13.55□□□□□ -0.24
SEMA4B-220ENST00000561321 TRIOO75962 3097 aa13.54□□□□□ -0.24
SEMA4B-220ENST00000561321 K7ELQ4 463 aaPredicted RBP13.54□□□□□ -0.24
SEMA4B-220ENST00000561321 PTGESO14684 152 aa13.54□□□□□ -0.24
SEMA4B-220ENST00000561321 LILRB3O75022 631 aa13.54□□□□□ -0.24
SEMA4B-220ENST00000561321 TADA2AO75478 443 aa13.54□□□□□ -0.24
SEMA4B-220ENST00000561321 THP07101 528 aa13.54□□□□□ -0.24
SEMA4B-220ENST00000561321 HARSP12081 509 aaKnown RBP13.54□□□□□ -0.24
SEMA4B-220ENST00000561321 OSTNP61366 133 aa13.54□□□□□ -0.24
SEMA4B-220ENST00000561321 TUSC3Q13454 348 aa13.54□□□□□ -0.24
SEMA4B-220ENST00000561321 HSP90AA2PQ14568 343 aaPredicted RBP13.54□□□□□ -0.24
SEMA4B-220ENST00000561321 KARSQ15046 597 aaKnown RBP13.54□□□□□ -0.24
SEMA4B-220ENST00000561321 ZNF568Q3ZCX4 644 aa13.54□□□□□ -0.24
SEMA4B-220ENST00000561321 GLRA4Q5JXX5 417 aa13.54□□□□□ -0.24
SEMA4B-220ENST00000561321 FUT10Q6P4F1 479 aa13.54□□□□□ -0.24
SEMA4B-220ENST00000561321 FAM173BQ6P4H8 233 aa13.54□□□□□ -0.24
SEMA4B-220ENST00000561321 TAS1R3Q7RTX0 852 aa13.54□□□□□ -0.24
SEMA4B-220ENST00000561321 APBB1IPQ7Z5R6 666 aaPredicted RBP13.54□□□□□ -0.24
SEMA4B-220ENST00000561321 PPFIBP1Q86W92 1011 aa13.54□□□□□ -0.24
SEMA4B-220ENST00000561321 SLC22A17Q8WUG5 538 aa13.54□□□□□ -0.24
SEMA4B-220ENST00000561321 ACO2Q99798 780 aaKnown RBP13.54□□□□□ -0.24
SEMA4B-220ENST00000561321 TARS2Q9BW92 718 aaKnown RBP13.54□□□□□ -0.24
SEMA4B-220ENST00000561321 MRPL4Q9BYD3 311 aaKnown RBP13.54□□□□□ -0.24
SEMA4B-220ENST00000561321 GPR62Q9BZJ7 368 aa13.54□□□□□ -0.24
SEMA4B-220ENST00000561321 TMEM134Q9H6X4 195 aa13.54□□□□□ -0.24
SEMA4B-220ENST00000561321 DZANK1Q9NVP4 752 aa13.54□□□□□ -0.24
SEMA4B-220ENST00000561321 ARHGAP28Q9P2N2 729 aa13.54□□□□□ -0.24
SEMA4B-220ENST00000561321 ADAM28Q9UKQ2 775 aa13.54□□□□□ -0.24
SEMA4B-220ENST00000561321 TRIP11Q15643 1979 aa13.54□□□□□ -0.24
SEMA4B-220ENST00000561321 LOC730098B7Z3J9 87 aa13.53□□□□□ -0.24
SEMA4B-220ENST00000561321 GPR37L1O60883 481 aa13.53□□□□□ -0.24
SEMA4B-220ENST00000561321 MYBP10242 640 aa13.53□□□□□ -0.24
SEMA4B-220ENST00000561321 PLS3P13797 630 aa13.53□□□□□ -0.24
SEMA4B-220ENST00000561321 MARCKSP29966 332 aaPredicted RBP13.53□□□□□ -0.24
SEMA4B-220ENST00000561321 LONP1P36776 959 aaKnown RBP13.53□□□□□ -0.24
SEMA4B-220ENST00000561321 CLCN4P51793 760 aa13.53□□□□□ -0.24
SEMA4B-220ENST00000561321 CEBPZQ03701 1054 aaKnown RBP13.53□□□□□ -0.24
SEMA4B-220ENST00000561321 ITIH3Q06033 890 aa13.53□□□□□ -0.24
SEMA4B-220ENST00000561321 STRN3Q13033 797 aa13.53□□□□□ -0.24
SEMA4B-220ENST00000561321 RESTQ13127 1097 aa13.53□□□□□ -0.24
SEMA4B-220ENST00000561321 SPECC1Q5M775 1068 aa13.53□□□□□ -0.24
SEMA4B-220ENST00000561321 TMC5Q6UXY8 1006 aa13.53□□□□□ -0.24
SEMA4B-220ENST00000561321 GPBP1Q86WP2 473 aa13.53□□□□□ -0.24
SEMA4B-220ENST00000561321 GLYCTKQ8IVS8 523 aa13.53□□□□□ -0.24
SEMA4B-220ENST00000561321 CEP120Q8N960 986 aa13.53□□□□□ -0.24
SEMA4B-220ENST00000561321 LRRC15Q8TF66 581 aa13.53□□□□□ -0.24
SEMA4B-220ENST00000561321 INTS4Q96HW7 963 aaKnown RBP13.53□□□□□ -0.24
SEMA4B-220ENST00000561321 FBXL18Q96ME1 805 aa13.53□□□□□ -0.24
SEMA4B-220ENST00000561321 TCHPQ9BT92 498 aa13.53□□□□□ -0.24
SEMA4B-220ENST00000561321 CDT1Q9H211 546 aa13.53□□□□□ -0.24
SEMA4B-220ENST00000561321 ADAM7Q9H2U9 754 aa13.53□□□□□ -0.24
SEMA4B-220ENST00000561321 POMKQ9H5K3 350 aa13.53□□□□□ -0.24
SEMA4B-220ENST00000561321 C17orf75Q9HAS0 396 aa13.53□□□□□ -0.24
SEMA4B-220ENST00000561321 KCND2Q9NZV8 630 aa13.53□□□□□ -0.24
SEMA4B-220ENST00000561321 TNFSF13BQ9Y275 285 aa13.53□□□□□ -0.24
SEMA4B-220ENST00000561321 SSX2IPQ9Y2D8 614 aa13.53□□□□□ -0.24
SEMA4B-220ENST00000561321 RBM19Q9Y4C8 960 aaKnown RBP13.53□□□□□ -0.24
SEMA4B-220ENST00000561321 PLXNA3P51805 1871 aa13.53□□□□□ -0.24
SEMA4B-220ENST00000561321 TEX28O15482 410 aa13.52□□□□□ -0.25
SEMA4B-220ENST00000561321 KIF4AO95239 1232 aa13.52□□□□□ -0.25
SEMA4B-220ENST00000561321 KRT18P05783 430 aaKnown RBP13.52□□□□□ -0.25
SEMA4B-220ENST00000561321 ADH1AP07327 375 aa13.52□□□□□ -0.25
SEMA4B-220ENST00000561321 PLCG1P19174 1290 aa13.52□□□□□ -0.25
SEMA4B-220ENST00000561321 SMTNP53814 917 aa13.52□□□□□ -0.25
SEMA4B-220ENST00000561321 YARSP54577 528 aaKnown RBP13.52□□□□□ -0.25
SEMA4B-220ENST00000561321 DSG1Q02413 1049 aa13.52□□□□□ -0.25
SEMA4B-220ENST00000561321 MCM6Q14566 821 aa13.52□□□□□ -0.25
SEMA4B-220ENST00000561321 USP41Q3LFD5 358 aa13.52□□□□□ -0.25
SEMA4B-220ENST00000561321 ARSHQ5FYA8 562 aa13.52□□□□□ -0.25
SEMA4B-220ENST00000561321 KIAA0319Q5VV43 1072 aa13.52□□□□□ -0.25
SEMA4B-220ENST00000561321 RNF168Q8IYW5 571 aaPredicted RBP13.52□□□□□ -0.25
SEMA4B-220ENST00000561321 KCTD17Q8N5Z5 321 aa13.52□□□□□ -0.25
SEMA4B-220ENST00000561321 FEZF2Q8TBJ5 459 aa13.52□□□□□ -0.25
SEMA4B-220ENST00000561321 SPIRE2Q8WWL2 714 aa13.52□□□□□ -0.25
SEMA4B-220ENST00000561321 RIN2Q8WYP3 895 aaPredicted RBP13.52□□□□□ -0.25
SEMA4B-220ENST00000561321 ZBTB45Q96K62 511 aaPredicted RBP13.52□□□□□ -0.25
SEMA4B-220ENST00000561321 RIPOR3Q96MK2 946 aa13.52□□□□□ -0.25
SEMA4B-220ENST00000561321 CCDC94Q9BW85 323 aaPredicted RBP13.52□□□□□ -0.25
SEMA4B-220ENST00000561321 ANKFY1Q9P2R3 1169 aa13.52□□□□□ -0.25
SEMA4B-220ENST00000561321 SF3B1O75533 1304 aaKnown RBP eCLIP13.51□□□□□ -0.25
SEMA4B-220ENST00000561321 SLC26A4O43511 780 aa13.51□□□□□ -0.25
SEMA4B-220ENST00000561321 EFEMP2O95967 443 aa13.51□□□□□ -0.25
SEMA4B-220ENST00000561321 GLUD1P00367 558 aa13.51□□□□□ -0.25
SEMA4B-220ENST00000561321 MAPTP10636 758 aaKnown RBP13.51□□□□□ -0.25
SEMA4B-220ENST00000561321 RPL17P18621 184 aaKnown RBP13.51□□□□□ -0.25
SEMA4B-220ENST00000561321 MTHFRP42898 656 aa13.51□□□□□ -0.25
SEMA4B-220ENST00000561321 MATR3P43243 847 aaKnown RBP eCLIP13.51□□□□□ -0.25
SEMA4B-220ENST00000561321 PTPAQ15257 358 aa13.51□□□□□ -0.25
SEMA4B-220ENST00000561321 NAB2Q15742 525 aa13.51□□□□□ -0.25
SEMA4B-220ENST00000561321 HERC4Q5GLZ8 1057 aaPredicted RBP13.51□□□□□ -0.25
SEMA4B-220ENST00000561321 MPZL3Q6UWV2 235 aa13.51□□□□□ -0.25
SEMA4B-220ENST00000561321 CEP57Q86XR8 500 aa13.51□□□□□ -0.25
SEMA4B-220ENST00000561321 PALB2Q86YC2 1186 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms