RNA–Protein interactions for RNA: ENST00000561189.1

CTDSPL2-211, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-211ENST00000561189 ARHGEF18Q6ZSZ5 1173 aa4.35□□□□□ -1.71
CTDSPL2-211ENST00000561189 GPR155Q7Z3F1 870 aa4.35□□□□□ -1.71
CTDSPL2-211ENST00000561189 CLEC14AQ86T13 490 aa4.35□□□□□ -1.71
CTDSPL2-211ENST00000561189 PRR18Q8N4B5 295 aa4.35□□□□□ -1.71
CTDSPL2-211ENST00000561189 ANKRD53Q8N9V6 530 aa4.35□□□□□ -1.71
CTDSPL2-211ENST00000561189 PIK3C3Q8NEB9 887 aa4.35□□□□□ -1.71
CTDSPL2-211ENST00000561189 KLHDC4Q8TBB5 520 aa4.35□□□□□ -1.71
CTDSPL2-211ENST00000561189 BRIX1Q8TDN6 353 aaKnown RBP4.35□□□□□ -1.71
CTDSPL2-211ENST00000561189 ZNF526Q8TF50 670 aaPredicted RBP4.35□□□□□ -1.71
CTDSPL2-211ENST00000561189 CGRRF1Q99675 332 aa4.35□□□□□ -1.71
CTDSPL2-211ENST00000561189 SPATA25Q9BR10 227 aa4.35□□□□□ -1.71
CTDSPL2-211ENST00000561189 KIAA1683Q9H0B3 1180 aa4.35□□□□□ -1.71
CTDSPL2-211ENST00000561189 ZNF700Q9H0M5 742 aa4.35□□□□□ -1.71
CTDSPL2-211ENST00000561189 TMEM60Q9H2L4 133 aa4.35□□□□□ -1.71
CTDSPL2-211ENST00000561189 WDCPQ9H6R7 721 aa4.35□□□□□ -1.71
CTDSPL2-211ENST00000561189 PARD6AQ9NPB6 346 aa4.35□□□□□ -1.71
CTDSPL2-211ENST00000561189 LMBRD1Q9NUN5 540 aa4.35□□□□□ -1.71
CTDSPL2-211ENST00000561189 RTEL1Q9NZ71 1219 aa4.35□□□□□ -1.71
CTDSPL2-211ENST00000561189 CALCOCO1Q9P1Z2 691 aa4.35□□□□□ -1.71
CTDSPL2-211ENST00000561189 SCOCQ9UIL1 159 aa4.35□□□□□ -1.71
CTDSPL2-211ENST00000561189 NR2E3Q9Y5X4 410 aa4.35□□□□□ -1.71
CTDSPL2-211ENST00000561189 MYBBP1AQ9BQG0 1328 aaKnown RBP4.35□□□□□ -1.71
CTDSPL2-211ENST00000561189 A0A1W2PPL8 197 aa4.34□□□□□ -1.71
CTDSPL2-211ENST00000561189 TPD52L2O43399 206 aaKnown RBP4.34□□□□□ -1.71
CTDSPL2-211ENST00000561189 PQBP1O60828 265 aaKnown RBP4.34□□□□□ -1.71
CTDSPL2-211ENST00000561189 TMEM127O75204 238 aa4.34□□□□□ -1.71
CTDSPL2-211ENST00000561189 TUSC2O75896 110 aa4.34□□□□□ -1.71
CTDSPL2-211ENST00000561189 SASH1O94885 1247 aa4.34□□□□□ -1.71
CTDSPL2-211ENST00000561189 FTH1P19P0C7X4 201 aa4.34□□□□□ -1.71
CTDSPL2-211ENST00000561189 RAP2AP10114 183 aa4.34□□□□□ -1.71
CTDSPL2-211ENST00000561189 SYN1P17600 705 aa4.34□□□□□ -1.71
CTDSPL2-211ENST00000561189 RHCEP18577 417 aa4.34□□□□□ -1.71
CTDSPL2-211ENST00000561189 CSF2RBP32927 897 aa4.34□□□□□ -1.71
CTDSPL2-211ENST00000561189 KCNC1P48547 511 aa4.34□□□□□ -1.71
CTDSPL2-211ENST00000561189 SLURP1P55000 103 aa4.34□□□□□ -1.71
CTDSPL2-211ENST00000561189 ATP2C1P98194 919 aaPredicted RBP4.34□□□□□ -1.71
CTDSPL2-211ENST00000561189 RHDQ02161 417 aa4.34□□□□□ -1.71
CTDSPL2-211ENST00000561189 NOGQ13253 232 aa4.34□□□□□ -1.71
CTDSPL2-211ENST00000561189 ZFYVE27Q5T4F4 411 aa4.34□□□□□ -1.71
CTDSPL2-211ENST00000561189 RNF220Q5VTB9 566 aa4.34□□□□□ -1.71
CTDSPL2-211ENST00000561189 CHST15Q7LFX5 561 aaPredicted RBP4.34□□□□□ -1.71
CTDSPL2-211ENST00000561189 HEATR3Q7Z4Q2 680 aa4.34□□□□□ -1.71
CTDSPL2-211ENST00000561189 FRMD5Q7Z6J6 570 aa4.34□□□□□ -1.71
CTDSPL2-211ENST00000561189 KBTBD2Q8IY47 623 aa4.34□□□□□ -1.71
CTDSPL2-211ENST00000561189 RPL10LQ96L21 214 aaKnown RBP4.34□□□□□ -1.71
CTDSPL2-211ENST00000561189 B3GNT5Q9BYG0 378 aa4.34□□□□□ -1.71
CTDSPL2-211ENST00000561189 LRRC27Q9C0I9 530 aa4.34□□□□□ -1.71
CTDSPL2-211ENST00000561189 NUP62CLQ9H1M0 184 aa4.34□□□□□ -1.71
CTDSPL2-211ENST00000561189 MSL2Q9HCI7 577 aa4.34□□□□□ -1.71
CTDSPL2-211ENST00000561189 ABCF2Q9UG63 623 aa4.34□□□□□ -1.71
CTDSPL2-211ENST00000561189 DDX20Q9UHI6 824 aaKnown RBP4.34□□□□□ -1.71
CTDSPL2-211ENST00000561189 TPCN1Q9ULQ1 816 aa4.34□□□□□ -1.71
CTDSPL2-211ENST00000561189 CTDP1Q9Y5B0 961 aaPredicted RBP4.34□□□□□ -1.71
CTDSPL2-211ENST00000561189 A0A1W2PRX2 142 aa4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 FOXN3O00409 490 aaPredicted RBP4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 B4GALT4O60513 344 aa4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 EIF3JO75822 258 aaKnown RBP4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 HRGP04196 525 aa4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 ZNF888P0CJ79 500 aaPredicted RBP4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 MTHFD1P11586 935 aaKnown RBP4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 ALAS1P13196 640 aa4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 RPL17P18621 184 aaKnown RBP4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 DDCP20711 480 aa4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 MXRA7P84157 204 aa4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 APBA1Q02410 837 aa4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 PPP3CAQ08209 521 aa4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 SP140Q13342 867 aa4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 ZNF827Q17R98 1081 aa4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 KHDC1Q4VXA5 237 aaKnown RBP4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 SLC44A4Q53GD3 710 aa4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 NPNTQ6UXI9 565 aa4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 CMTM4Q8IZR5 234 aa4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 LGI4Q8N135 537 aa4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 SH2D3CQ8N5H7 860 aa4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 FAM156AQ8NDB6 213 aa4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 SVIPQ8NHG7 77 aa4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 PPP1R35Q8TAP8 253 aa4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 CASKIN2Q8WXE0 1202 aa4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 LRTOMTQ8WZ04 291 aa4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 RABGGTAQ92696 567 aa4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 IL17RAQ96F46 866 aa4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 SLC35A4Q96G79 324 aa4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 TCF25Q9BQ70 676 aa4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 PDCD2LQ9BRP1 358 aa4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 XYLT2Q9H1B5 865 aa4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 ARMT1Q9H993 441 aa4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 PNPOQ9NVS9 261 aa4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 SLC52A1Q9NWF4 448 aa4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 ING3Q9NXR8 418 aa4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 AJAP1Q9UKB5 411 aaPredicted RBP4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 CNOT11Q9UKZ1 510 aaKnown RBP4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 OGDHLQ9ULD0 1010 aa4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 CLCA2Q9UQC9 943 aa4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 SNX13Q9Y5W8 968 aa4.33□□□□□ -1.72
CTDSPL2-211ENST00000561189 C2orf78A6NCI8 922 aa4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 PLEKHD1A6NEE1 506 aa4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 PHGDHO43175 533 aaKnown RBP4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 SLC26A4O43511 780 aa4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 GNAI2P04899 355 aa4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 ALDH2P05091 517 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms