RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 BSNDQ8WZ55 320 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 KIFAP3Q92845 792 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 IFT74Q96LB3 600 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 ADPGKQ9BRR6 497 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 BACH2Q9BYV9 841 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 PLEKHA4Q9H4M7 779 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 PDZD7Q9H5P4 517 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 GPRC5CQ9NQ84 441 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 TSHZ2Q9NRE2 1034 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 CDH22Q9UJ99 828 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 ADAM28Q9UKQ2 775 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 KIF3AQ9Y496 699 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 SF3B1O75533 1304 aaKnown RBP eCLIP7.29□□□□□ -1.24
SLIRP-203ENST00000554074 PHLPP2Q6ZVD8 1323 aa7.29□□□□□ -1.24
SLIRP-203ENST00000554074 A0A087WWV3 80 aa7.29□□□□□ -1.24
SLIRP-203ENST00000554074 C2CD2LO14523 706 aa7.29□□□□□ -1.24
SLIRP-203ENST00000554074 BRD1O95696 1058 aa7.29□□□□□ -1.24
SLIRP-203ENST00000554074 SSBP05455 408 aaKnown RBP eCLIP7.29□□□□□ -1.24
SLIRP-203ENST00000554074 PRKCBP05771 671 aa7.29□□□□□ -1.24
SLIRP-203ENST00000554074 CCT6AP40227 531 aaKnown RBP7.29□□□□□ -1.24
SLIRP-203ENST00000554074 TOB1P50616 345 aaPredicted RBP7.29□□□□□ -1.24
SLIRP-203ENST00000554074 PTPN5P54829 565 aa7.29□□□□□ -1.24
SLIRP-203ENST00000554074 ELAVL2Q12926 359 aaKnown RBP7.29□□□□□ -1.24
SLIRP-203ENST00000554074 PTGDRQ13258 359 aa7.29□□□□□ -1.24
SLIRP-203ENST00000554074 HSP90AA2PQ14568 343 aaPredicted RBP7.29□□□□□ -1.24
SLIRP-203ENST00000554074 PDXDC1Q6P996 788 aa7.29□□□□□ -1.24
SLIRP-203ENST00000554074 MAEAQ7L5Y9 396 aa7.29□□□□□ -1.24
SLIRP-203ENST00000554074 TAS1R1Q7RTX1 841 aa7.29□□□□□ -1.24
SLIRP-203ENST00000554074 ALYREFQ86V81 257 aaKnown RBP7.29□□□□□ -1.24
SLIRP-203ENST00000554074 STAMQ92783 540 aa7.29□□□□□ -1.24
SLIRP-203ENST00000554074 ACSF2Q96CM8 615 aaPredicted RBP7.29□□□□□ -1.24
SLIRP-203ENST00000554074 TIPINQ9BVW5 301 aa7.29□□□□□ -1.24
SLIRP-203ENST00000554074 APOL6Q9BWW8 343 aa7.29□□□□□ -1.24
SLIRP-203ENST00000554074 GPR62Q9BZJ7 368 aa7.29□□□□□ -1.24
SLIRP-203ENST00000554074 IRF2BPLQ9H1B7 796 aa7.29□□□□□ -1.24
SLIRP-203ENST00000554074 BHMT2Q9H2M3 363 aa7.29□□□□□ -1.24
SLIRP-203ENST00000554074 C17orf75Q9HAS0 396 aa7.29□□□□□ -1.24
SLIRP-203ENST00000554074 MAN1C1Q9NR34 630 aa7.29□□□□□ -1.24
SLIRP-203ENST00000554074 ZDHHC7Q9NXF8 308 aa7.29□□□□□ -1.24
SLIRP-203ENST00000554074 LRWD1Q9UFC0 647 aa7.29□□□□□ -1.24
SLIRP-203ENST00000554074 PARP2Q9UGN5 583 aa7.29□□□□□ -1.24
SLIRP-203ENST00000554074 CCDC195A0A1B0GUA6 201 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 SPDYE4A6NLX3 237 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 TTLL13PA6NNM8 815 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 TMEM189-UBE2V1I3L0A0 370 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 PTGESO14684 152 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 ST18O60284 1047 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 TADA2AO75478 443 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 RECQL4O94761 1208 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 THP07101 528 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 WEE2P0C1S8 567 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 SP100P23497 879 aaPredicted RBP7.28□□□□□ -1.24
SLIRP-203ENST00000554074 AVPR2P30518 371 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 TDGQ13569 410 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 NAB2Q15742 525 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 ECM1Q16610 540 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 RILPL1Q5EBL4 403 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 HYIQ5T013 277 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 IER5LQ5T953 404 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 KRT79Q5XKE5 535 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 KANK3Q6NY19 840 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 LILRA6Q6PI73 481 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 RTL10Q7L3V2 364 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 CDR2LQ86X02 465 aaPredicted RBP7.28□□□□□ -1.24
SLIRP-203ENST00000554074 PRSS33Q8NF86 280 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 SNX29Q8TEQ0 813 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 PIK3R5Q8WYR1 880 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 NXPE3Q969Y0 559 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 DRC1Q96MC2 740 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 TMEM134Q9H6X4 195 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 WDR6Q9NNW5 1121 aaKnown RBP7.28□□□□□ -1.24
SLIRP-203ENST00000554074 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.28□□□□□ -1.24
SLIRP-203ENST00000554074 DDX19AQ9NUU7 478 aaKnown RBP7.28□□□□□ -1.24
SLIRP-203ENST00000554074 KLK14Q9P0G3 267 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 IGSF9Q9P2J2 1179 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 EPS15L1Q9UBC2 864 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 LIMD1Q9UGP4 676 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 KCNG1Q9UIX4 513 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 KIAA1024Q9UPX6 916 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 DNM3Q9UQ16 869 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 TNFSF13BQ9Y275 285 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 PCDHB6Q9Y5E3 794 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 FAM186AA6NE01 2351 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 TCHHQ07283 1943 aa7.28□□□□□ -1.24
SLIRP-203ENST00000554074 CLUHO75153 1309 aa7.27□□□□□ -1.24
SLIRP-203ENST00000554074 F8W810 466 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 K7ERI5 159 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 SLC26A4O43511 780 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 TGM5O43548 720 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 ZMYND10O75800 440 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 KIF4AO95239 1232 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 EDN1P05305 212 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 ASGR2P07307 311 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 POU2F2P09086 479 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 GUCY2CP25092 1073 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 HOXA9P31269 272 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 MCM2P49736 904 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 MRE11P49959 708 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 CLCN5P51795 746 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 VCPP55072 806 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms