RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 PDIA3P30101 505 aaKnown RBP12.31□□□□□ -0.44
PFDN5-212ENST00000550880 HOXA9P31269 272 aa12.31□□□□□ -0.44
PFDN5-212ENST00000550880 POU5F1BQ06416 359 aa12.31□□□□□ -0.44
PFDN5-212ENST00000550880 HSP90AA2PQ14568 343 aaPredicted RBP12.31□□□□□ -0.44
PFDN5-212ENST00000550880 INF2Q27J81 1249 aa12.31□□□□□ -0.44
PFDN5-212ENST00000550880 SLC27A1Q6PCB7 646 aa12.31□□□□□ -0.44
PFDN5-212ENST00000550880 CPLX2Q6PUV4 134 aaKnown RBP12.31□□□□□ -0.44
PFDN5-212ENST00000550880 CEP57Q86XR8 500 aa12.31□□□□□ -0.44
PFDN5-212ENST00000550880 DAGLBQ8NCG7 672 aa12.31□□□□□ -0.44
PFDN5-212ENST00000550880 CCDC43Q96MW1 224 aaKnown RBP12.31□□□□□ -0.44
PFDN5-212ENST00000550880 TTPALQ9BTX7 342 aa12.31□□□□□ -0.44
PFDN5-212ENST00000550880 PHF20Q9BVI0 1012 aa12.31□□□□□ -0.44
PFDN5-212ENST00000550880 NXF3Q9H4D5 531 aaKnown RBP12.31□□□□□ -0.44
PFDN5-212ENST00000550880 FBXW11Q9UKB1 542 aa12.31□□□□□ -0.44
PFDN5-212ENST00000550880 GMEB2Q9UKD1 530 aa12.31□□□□□ -0.44
PFDN5-212ENST00000550880 VAV3Q9UKW4 847 aa12.31□□□□□ -0.44
PFDN5-212ENST00000550880 USP18Q9UMW8 372 aa12.31□□□□□ -0.44
PFDN5-212ENST00000550880 ZMYM2Q9UBW7 1377 aa12.3□□□□□ -0.44
PFDN5-212ENST00000550880 OTOGLQ3ZCN5 2332 aa12.3□□□□□ -0.44
PFDN5-212ENST00000550880 TBX3O15119 743 aa12.3□□□□□ -0.44
PFDN5-212ENST00000550880 CCL16O15467 120 aa12.3□□□□□ -0.44
PFDN5-212ENST00000550880 SLC37A4O43826 429 aa12.3□□□□□ -0.44
PFDN5-212ENST00000550880 BAG4O95429 457 aaKnown RBP12.3□□□□□ -0.44
PFDN5-212ENST00000550880 ARF4P18085 180 aaPredicted RBP12.3□□□□□ -0.44
PFDN5-212ENST00000550880 ATXN1P54253 815 aaKnown RBP12.3□□□□□ -0.44
PFDN5-212ENST00000550880 ELAVL2Q12926 359 aaKnown RBP12.3□□□□□ -0.44
PFDN5-212ENST00000550880 PPP2R5DQ14738 602 aa12.3□□□□□ -0.44
PFDN5-212ENST00000550880 PSMD5Q16401 504 aa12.3□□□□□ -0.44
PFDN5-212ENST00000550880 UVSSAQ2YD98 709 aa12.3□□□□□ -0.44
PFDN5-212ENST00000550880 FAM171A1Q5VUB5 890 aa12.3□□□□□ -0.44
PFDN5-212ENST00000550880 NCAPH2Q6IBW4 605 aa12.3□□□□□ -0.44
PFDN5-212ENST00000550880 PPP4R3AQ6IN85 833 aa12.3□□□□□ -0.44
PFDN5-212ENST00000550880 PRSS55Q6UWB4 352 aaPredicted RBP12.3□□□□□ -0.44
PFDN5-212ENST00000550880 ZNF852Q6ZMS4 543 aa12.3□□□□□ -0.44
PFDN5-212ENST00000550880 NEK8Q86SG6 692 aa12.3□□□□□ -0.44
PFDN5-212ENST00000550880 IFNLR1Q8IU57 520 aaPredicted RBP12.3□□□□□ -0.44
PFDN5-212ENST00000550880 RTKNQ9BST9 563 aa12.3□□□□□ -0.44
PFDN5-212ENST00000550880 FAM126AQ9BYI3 521 aaPredicted RBP12.3□□□□□ -0.44
PFDN5-212ENST00000550880 AGXT2Q9BYV1 514 aa12.3□□□□□ -0.44
PFDN5-212ENST00000550880 EPC1Q9H2F5 836 aa12.3□□□□□ -0.44
PFDN5-212ENST00000550880 NCOA5Q9HCD5 579 aaKnown RBP12.3□□□□□ -0.44
PFDN5-212ENST00000550880 KCNMB3Q9NPA1 279 aa12.3□□□□□ -0.44
PFDN5-212ENST00000550880 LTB4R2Q9NPC1 389 aa12.3□□□□□ -0.44
PFDN5-212ENST00000550880 KLK14Q9P0G3 267 aa12.3□□□□□ -0.44
PFDN5-212ENST00000550880 RAB23Q9ULC3 237 aa12.3□□□□□ -0.44
PFDN5-212ENST00000550880 KCNH3Q9ULD8 1083 aa12.3□□□□□ -0.44
PFDN5-212ENST00000550880 SMG5Q9UPR3 1016 aaKnown RBP12.3□□□□□ -0.44
PFDN5-212ENST00000550880 M0R2N6 131 aa12.29□□□□□ -0.44
PFDN5-212ENST00000550880 CCNT1O60563 726 aaKnown RBP12.29□□□□□ -0.44
PFDN5-212ENST00000550880 DGAT1O75907 488 aa12.29□□□□□ -0.44
PFDN5-212ENST00000550880 KRT37O76014 449 aa12.29□□□□□ -0.44
PFDN5-212ENST00000550880 NPTXRO95502 500 aa12.29□□□□□ -0.44
PFDN5-212ENST00000550880 POU2F2P09086 479 aa12.29□□□□□ -0.44
PFDN5-212ENST00000550880 XBP1P17861 261 aa12.29□□□□□ -0.44
PFDN5-212ENST00000550880 NRLP54845 237 aa12.29□□□□□ -0.44
PFDN5-212ENST00000550880 NTHL1P78549 312 aa12.29□□□□□ -0.44
PFDN5-212ENST00000550880 MBTD1Q05BQ5 628 aa12.29□□□□□ -0.44
PFDN5-212ENST00000550880 TUSC3Q13454 348 aa12.29□□□□□ -0.44
PFDN5-212ENST00000550880 CTTNQ14247 550 aaKnown RBP12.29□□□□□ -0.44
PFDN5-212ENST00000550880 PABPC1LQ4VXU2 614 aaKnown RBP12.29□□□□□ -0.44
PFDN5-212ENST00000550880 RTP2Q5QGT7 225 aa12.29□□□□□ -0.44
PFDN5-212ENST00000550880 AXDND1Q5T1B0 1012 aaPredicted RBP12.29□□□□□ -0.44
PFDN5-212ENST00000550880 TPRG1Q6ZUI0 275 aa12.29□□□□□ -0.44
PFDN5-212ENST00000550880 RTL10Q7L3V2 364 aa12.29□□□□□ -0.44
PFDN5-212ENST00000550880 TPH2Q8IWU9 490 aa12.29□□□□□ -0.44
PFDN5-212ENST00000550880 SLFN12Q8IYM2 578 aa12.29□□□□□ -0.44
PFDN5-212ENST00000550880 ZBTB44Q8NCP5 570 aa12.29□□□□□ -0.44
PFDN5-212ENST00000550880 PIK3R5Q8WYR1 880 aa12.29□□□□□ -0.44
PFDN5-212ENST00000550880 RABGGTAQ92696 567 aa12.29□□□□□ -0.44
PFDN5-212ENST00000550880 KCNB2Q92953 911 aa12.29□□□□□ -0.44
PFDN5-212ENST00000550880 DYDC2Q96IM9 177 aa12.29□□□□□ -0.44
PFDN5-212ENST00000550880 KXD1Q9BQD3 176 aa12.29□□□□□ -0.44
PFDN5-212ENST00000550880 CLSTN3Q9BQT9 956 aa12.29□□□□□ -0.44
PFDN5-212ENST00000550880 NFKBIZQ9BYH8 718 aa12.29□□□□□ -0.44
PFDN5-212ENST00000550880 RGL1Q9NZL6 768 aa12.29□□□□□ -0.44
PFDN5-212ENST00000550880 WRAP73Q9P2S5 460 aaPredicted RBP12.29□□□□□ -0.44
PFDN5-212ENST00000550880 MTF2Q9Y483 593 aaPredicted RBP12.29□□□□□ -0.44
PFDN5-212ENST00000550880 SNX14Q9Y5W7 946 aa12.29□□□□□ -0.44
PFDN5-212ENST00000550880 DOCK8Q8NF50 2099 aa12.28□□□□□ -0.44
PFDN5-212ENST00000550880 NCOR2Q9Y618 2525 aa12.28□□□□□ -0.44
PFDN5-212ENST00000550880 CACNA1IQ9P0X4 2223 aa12.28□□□□□ -0.44
PFDN5-212ENST00000550880 A0A1B0GUA9 196 aa12.28□□□□□ -0.44
PFDN5-212ENST00000550880 CD72P21854 359 aa12.28□□□□□ -0.44
PFDN5-212ENST00000550880 HSPA4P34932 840 aa12.28□□□□□ -0.44
PFDN5-212ENST00000550880 RPS9P46781 194 aaKnown RBP12.28□□□□□ -0.44
PFDN5-212ENST00000550880 EVCP57679 992 aa12.28□□□□□ -0.44
PFDN5-212ENST00000550880 IRX6P78412 446 aaPredicted RBP12.28□□□□□ -0.44
PFDN5-212ENST00000550880 CYP4A11Q02928 519 aa12.28□□□□□ -0.44
PFDN5-212ENST00000550880 TMEM132AQ24JP5 1023 aa12.28□□□□□ -0.44
PFDN5-212ENST00000550880 GSTCDQ8NEC7 633 aa12.28□□□□□ -0.44
PFDN5-212ENST00000550880 ITFG1Q8TB96 612 aa12.28□□□□□ -0.44
PFDN5-212ENST00000550880 LNX1Q8TBB1 728 aaPredicted RBP12.28□□□□□ -0.44
PFDN5-212ENST00000550880 SLC7A14Q8TBB6 771 aa12.28□□□□□ -0.44
PFDN5-212ENST00000550880 HASPINQ8TF76 798 aa12.28□□□□□ -0.44
PFDN5-212ENST00000550880 CLDN23Q96B33 292 aa12.28□□□□□ -0.44
PFDN5-212ENST00000550880 MRPS23Q9Y3D9 190 aaKnown RBP12.28□□□□□ -0.44
PFDN5-212ENST00000550880 MTCL1Q9Y4B5 1905 aaKnown RBP12.28□□□□□ -0.44
PFDN5-212ENST00000550880 CEP250Q9BV73 2442 aa12.27□□□□□ -0.44
PFDN5-212ENST00000550880 FANCMQ8IYD8 2048 aa12.27□□□□□ -0.44
PFDN5-212ENST00000550880 CASTOR2A6NHX0 329 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms