RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 CNTNAP2Q9UHC6 1331 aa13.15□□□□□ -0.3
GABPB1-206ENST00000543881 SPATA31D3P0C874 917 aa13.15□□□□□ -0.3
GABPB1-206ENST00000543881 LAMP2P13473 410 aa13.15□□□□□ -0.3
GABPB1-206ENST00000543881 ITGA4P13612 1032 aa13.15□□□□□ -0.3
GABPB1-206ENST00000543881 ARF4P18085 180 aaPredicted RBP13.15□□□□□ -0.3
GABPB1-206ENST00000543881 AXLP30530 894 aa13.15□□□□□ -0.3
GABPB1-206ENST00000543881 TFDP1Q14186 410 aa13.15□□□□□ -0.3
GABPB1-206ENST00000543881 PCBP1Q15365 356 aaKnown RBP eCLIP13.15□□□□□ -0.3
GABPB1-206ENST00000543881 NOTUMQ6P988 496 aa13.15□□□□□ -0.3
GABPB1-206ENST00000543881 DCLRE1AQ6PJP8 1040 aa13.15□□□□□ -0.3
GABPB1-206ENST00000543881 SPATA31D4Q6ZUB0 917 aa13.15□□□□□ -0.3
GABPB1-206ENST00000543881 MAEAQ7L5Y9 396 aa13.15□□□□□ -0.3
GABPB1-206ENST00000543881 CDR2LQ86X02 465 aaPredicted RBP13.15□□□□□ -0.3
GABPB1-206ENST00000543881 ZNF707Q96C28 371 aaPredicted RBP13.15□□□□□ -0.3
GABPB1-206ENST00000543881 NFKBIZQ9BYH8 718 aa13.15□□□□□ -0.3
GABPB1-206ENST00000543881 CSRNP2Q9H175 543 aa13.15□□□□□ -0.3
GABPB1-206ENST00000543881 FOXP1Q9H334 677 aaPredicted RBP13.15□□□□□ -0.3
GABPB1-206ENST00000543881 PIDD1Q9HB75 910 aa13.15□□□□□ -0.3
GABPB1-206ENST00000543881 TUFT1Q9NNX1 390 aa13.15□□□□□ -0.3
GABPB1-206ENST00000543881 MARCH5Q9NX47 278 aa13.15□□□□□ -0.3
GABPB1-206ENST00000543881 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.15□□□□□ -0.37e-6■■■■□ 20.5
GABPB1-206ENST00000543881 PRG3Q9Y2Y8 225 aaPredicted RBP13.15□□□□□ -0.3
GABPB1-206ENST00000543881 CACNA1IQ9P0X4 2223 aa13.15□□□□□ -0.3
GABPB1-206ENST00000543881 MTCL1Q9Y4B5 1905 aaKnown RBP13.15□□□□□ -0.31
GABPB1-206ENST00000543881 ARL5CA6NH57 179 aa13.14□□□□□ -0.31
GABPB1-206ENST00000543881 OR52Z1P0C646 297 aa13.14□□□□□ -0.31
GABPB1-206ENST00000543881 GLULP15104 373 aa13.14□□□□□ -0.31
GABPB1-206ENST00000543881 MLH1P40692 756 aa13.14□□□□□ -0.31
GABPB1-206ENST00000543881 OR1G1P47890 313 aa13.14□□□□□ -0.31
GABPB1-206ENST00000543881 GLUD2P49448 558 aa13.14□□□□□ -0.31
GABPB1-206ENST00000543881 NBR1Q14596 966 aa13.14□□□□□ -0.31
GABPB1-206ENST00000543881 KIAA0319Q5VV43 1072 aa13.14□□□□□ -0.31
GABPB1-206ENST00000543881 POTEGQ6S5H5 508 aa13.14□□□□□ -0.31
GABPB1-206ENST00000543881 COLGALT2Q8IYK4 626 aa13.14□□□□□ -0.31
GABPB1-206ENST00000543881 RNF168Q8IYW5 571 aaPredicted RBP13.14□□□□□ -0.31
GABPB1-206ENST00000543881 C4orf32Q8N8J7 132 aa13.14□□□□□ -0.31
GABPB1-206ENST00000543881 SUMF1Q8NBK3 374 aa13.14□□□□□ -0.31
GABPB1-206ENST00000543881 CNNM3Q8NE01 707 aa13.14□□□□□ -0.31
GABPB1-206ENST00000543881 PJA1Q8NG27 643 aa13.14□□□□□ -0.31
GABPB1-206ENST00000543881 CCDC51Q96ER9 411 aa13.14□□□□□ -0.31
GABPB1-206ENST00000543881 ZSCAN31Q96LW9 406 aaPredicted RBP13.14□□□□□ -0.31
GABPB1-206ENST00000543881 ZFP42Q96MM3 310 aa13.14□□□□□ -0.31
GABPB1-206ENST00000543881 CCDC43Q96MW1 224 aaKnown RBP13.14□□□□□ -0.31
GABPB1-206ENST00000543881 GAD1Q99259 594 aa13.14□□□□□ -0.31
GABPB1-206ENST00000543881 POLR3CQ9BUI4 534 aaPredicted RBP13.14□□□□□ -0.31
GABPB1-206ENST00000543881 FOXQ1Q9C009 403 aa13.14□□□□□ -0.31
GABPB1-206ENST00000543881 NXF3Q9H4D5 531 aaKnown RBP13.14□□□□□ -0.31
GABPB1-206ENST00000543881 SLC2A4RGQ9NR83 387 aa13.14□□□□□ -0.31
GABPB1-206ENST00000543881 CACNA1BQ00975 2339 aa13.14□□□□□ -0.31
GABPB1-206ENST00000543881 CEP250Q9BV73 2442 aa13.13□□□□□ -0.31
GABPB1-206ENST00000543881 ANHXE9PGG2 379 aa13.13□□□□□ -0.31
GABPB1-206ENST00000543881 F8W810 466 aa13.13□□□□□ -0.31
GABPB1-206ENST00000543881 KINO60870 393 aaKnown RBP13.13□□□□□ -0.31
GABPB1-206ENST00000543881 PAPLNO95428 1278 aa13.13□□□□□ -0.31
GABPB1-206ENST00000543881 RPA1P27694 616 aa13.13□□□□□ -0.31
GABPB1-206ENST00000543881 HMGN5P82970 282 aaKnown RBP13.13□□□□□ -0.31
GABPB1-206ENST00000543881 HTR4Q13639 388 aa13.13□□□□□ -0.31
GABPB1-206ENST00000543881 ECM1Q16610 540 aa13.13□□□□□ -0.31
GABPB1-206ENST00000543881 RSPO4Q2I0M5 234 aaPredicted RBP13.13□□□□□ -0.31
GABPB1-206ENST00000543881 TTC38Q5R3I4 469 aa13.13□□□□□ -0.31
GABPB1-206ENST00000543881 GET4Q7L5D6 327 aaPredicted RBP13.13□□□□□ -0.31
GABPB1-206ENST00000543881 PALB2Q86YC2 1186 aa13.13□□□□□ -0.31
GABPB1-206ENST00000543881 NOSTRINQ8IVI9 506 aa13.13□□□□□ -0.31
GABPB1-206ENST00000543881 MAML2Q8IZL2 1156 aaPredicted RBP13.13□□□□□ -0.31
GABPB1-206ENST00000543881 GSTCDQ8NEC7 633 aa13.13□□□□□ -0.31
GABPB1-206ENST00000543881 ST13P5Q8NFI4 369 aaPredicted RBP13.13□□□□□ -0.31
GABPB1-206ENST00000543881 HDAC7Q8WUI4 952 aa13.13□□□□□ -0.31
GABPB1-206ENST00000543881 BSNDQ8WZ55 320 aa13.13□□□□□ -0.31
GABPB1-206ENST00000543881 CNTNAP3BQ96NU0 1288 aa13.13□□□□□ -0.31
GABPB1-206ENST00000543881 APOL6Q9BWW8 343 aa13.13□□□□□ -0.31
GABPB1-206ENST00000543881 CNTNAP3Q9BZ76 1288 aa13.13□□□□□ -0.31
GABPB1-206ENST00000543881 NT5C3AQ9H0P0 336 aa13.13□□□□□ -0.31
GABPB1-206ENST00000543881 PLEKHA4Q9H4M7 779 aa13.13□□□□□ -0.31
GABPB1-206ENST00000543881 RXFP1Q9HBX9 757 aa13.13□□□□□ -0.31
GABPB1-206ENST00000543881 UBN1Q9NPG3 1134 aa13.13□□□□□ -0.31
GABPB1-206ENST00000543881 SH2B1Q9NRF2 756 aaPredicted RBP13.13□□□□□ -0.31
GABPB1-206ENST00000543881 NUMBLQ9Y6R0 609 aa13.13□□□□□ -0.31
GABPB1-206ENST00000543881 NCOR2Q9Y618 2525 aa13.13□□□□□ -0.31
GABPB1-206ENST00000543881 MIA3Q5JRA6 1907 aa13.12□□□□□ -0.31
GABPB1-206ENST00000543881 A0A1B0GUA9 196 aa13.12□□□□□ -0.31
GABPB1-206ENST00000543881 TTLL13PA6NNM8 815 aa13.12□□□□□ -0.31
GABPB1-206ENST00000543881 LRRN2O75325 713 aa13.12□□□□□ -0.31
GABPB1-206ENST00000543881 KRT37O76014 449 aa13.12□□□□□ -0.31
GABPB1-206ENST00000543881 EFEMP2O95967 443 aa13.12□□□□□ -0.31
GABPB1-206ENST00000543881 AKAP5P24588 427 aa13.12□□□□□ -0.31
GABPB1-206ENST00000543881 RBM25P49756 843 aaKnown RBP13.12□□□□□ -0.31
GABPB1-206ENST00000543881 TOB1P50616 345 aaPredicted RBP13.12□□□□□ -0.31
GABPB1-206ENST00000543881 SCNN1GP51170 649 aa13.12□□□□□ -0.31
GABPB1-206ENST00000543881 STARD6P59095 220 aa13.12□□□□□ -0.31
GABPB1-206ENST00000543881 DSG1Q02413 1049 aa13.12□□□□□ -0.31
GABPB1-206ENST00000543881 DSC1Q08554 894 aa13.12□□□□□ -0.31
GABPB1-206ENST00000543881 ORC2Q13416 577 aaPredicted RBP13.12□□□□□ -0.31
GABPB1-206ENST00000543881 NACC1Q96RE7 527 aa13.12□□□□□ -0.31
GABPB1-206ENST00000543881 ZDHHC7Q9NXF8 308 aa13.12□□□□□ -0.31
GABPB1-206ENST00000543881 LRRIQ4A6NIV6 560 aa13.11□□□□□ -0.31
GABPB1-206ENST00000543881 TGM5O43548 720 aa13.11□□□□□ -0.31
GABPB1-206ENST00000543881 NPTXRO95502 500 aa13.11□□□□□ -0.31
GABPB1-206ENST00000543881 CENPBP07199 599 aaPredicted RBP13.11□□□□□ -0.31
GABPB1-206ENST00000543881 U2AF2P26368 475 aaKnown RBP eCLIP13.11□□□□□ -0.31
GABPB1-206ENST00000543881 NCBP1Q09161 790 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms