RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 CDR2LQ86X02 465 aaPredicted RBP8.36□□□□□ -1.07
LRP6-206ENST00000543091 TRIM62Q9BVG3 475 aa8.36□□□□□ -1.07
LRP6-206ENST00000543091 RNPEPQ9H4A4 650 aa8.36□□□□□ -1.07
LRP6-206ENST00000543091 SART1O43290 800 aaKnown RBP8.35□□□□□ -1.07
LRP6-206ENST00000543091 HTRA3P83110 453 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 GOLGA8FQ08AF8 430 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 GOLGA8DPQ0D2H9 430 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 BTG3Q14201 252 aaPredicted RBP8.35□□□□□ -1.07
LRP6-206ENST00000543091 DNAJC24Q6P3W2 148 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 PEX26Q7Z412 305 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 PLCD3Q8N3E9 789 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 NPLOC4Q8TAT6 608 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 MAIP1Q8WWC4 291 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 EDEM3Q9BZQ6 932 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 TMEM134Q9H6X4 195 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 TMEM8AQ9HCN3 771 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 NOVP48745 357 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 RTP1P59025 263 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 PTPN11Q06124 597 aaPredicted RBP8.35□□□□□ -1.07
LRP6-206ENST00000543091 ZNF394Q53GI3 561 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 LMBRD2Q68DH5 695 aaPredicted RBP8.35□□□□□ -1.07
LRP6-206ENST00000543091 TOGARAM2Q6ZUX3 1019 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 ERICH1Q86X53 443 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 MAP7D3Q8IWC1 876 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 MS4A4AQ96JQ5 239 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 TNS1Q9HBL0 1735 aaKnown RBP8.35□□□□□ -1.07
LRP6-206ENST00000543091 MORC2Q9Y6X9 1032 aaPredicted RBP8.35□□□□□ -1.07
LRP6-206ENST00000543091 H7C4K7 107 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 SERPING1P05155 500 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 CDC25BP30305 580 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 ACLYP53396 1101 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 MAPRE1Q15691 268 aaKnown RBP8.35□□□□□ -1.07
LRP6-206ENST00000543091 MAP9Q49MG5 647 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 SGO2Q562F6 1265 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 ZNF653Q96CK0 615 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 DPP7Q9UHL4 492 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 CACNA1SQ13698 1873 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 RGPD3A6NKT7 1758 aaPredicted RBP8.35□□□□□ -1.07
LRP6-206ENST00000543091 LAMB2P55268 1798 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 RGPD4Q7Z3J3 1758 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 DPYSL4O14531 572 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 B3GAT3O94766 335 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 HSPA1AP0DMV8 641 aaKnown RBP8.35□□□□□ -1.07
LRP6-206ENST00000543091 HSPA1BP0DMV9 641 aaKnown RBP8.35□□□□□ -1.07
LRP6-206ENST00000543091 ODC1P11926 461 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 SELPP16109 830 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 GJA5P36382 358 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 IRF5Q13568 498 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 KRT81Q14533 505 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 C10orf76Q5T2E6 689 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 SPATA2LQ8IUW3 424 aaPredicted RBP8.35□□□□□ -1.07
LRP6-206ENST00000543091 ADAM2Q99965 735 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 TSEN34Q9BSV6 310 aaKnown RBP8.35□□□□□ -1.07
LRP6-206ENST00000543091 AMFRQ9UKV5 643 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 VAV3Q9UKW4 847 aa8.35□□□□□ -1.07
LRP6-206ENST00000543091 EPN1Q9Y6I3 576 aaPredicted RBP8.35□□□□□ -1.07
LRP6-206ENST00000543091 GOLGA8SH3BPF8 625 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 CCNE2O96020 404 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 ALDH2P05091 517 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 CAPN2P17655 700 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 FMO5P49326 533 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 CCL23P55773 120 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 HLTFQ14527 1009 aaKnown RBP eCLIP8.34□□□□□ -1.07
LRP6-206ENST00000543091 TRIM72Q6ZMU5 477 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 NT5DC4Q86YG4 428 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 C11orf49Q9H6J7 331 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 KLK14Q9P0G3 267 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 MSRAQ9UJ68 235 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 STRIP2Q9ULQ0 834 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 FAN1Q9Y2M0 1017 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 NAV1Q8NEY1 1877 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 IGLV3-22A0A075B6J6 115 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 TMEM150BA6NC51 233 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 GAS8O95995 478 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 URODP06132 367 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 ATP1A3P13637 1013 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 CYP27A1Q02318 531 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 CACNB2Q08289 660 aaPredicted RBP8.34□□□□□ -1.07
LRP6-206ENST00000543091 PPIGQ13427 754 aaKnown RBP eCLIP8.34□□□□□ -1.079e-7■■□□□ 13
LRP6-206ENST00000543091 PAN2Q504Q3 1202 aaKnown RBP8.34□□□□□ -1.07
LRP6-206ENST00000543091 C4orf50Q6ZRC1 276 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 C1orf186Q6ZWK4 172 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 VSTM4Q8IW00 320 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 TMC2Q8TDI7 906 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 ASB7Q9H672 318 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 RSAD1Q9HA92 442 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 PDE11AQ9HCR9 933 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 BLOC1S4Q9NUP1 217 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 RAB20Q9NX57 234 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.34□□□□□ -1.07
LRP6-206ENST00000543091 RREB1Q92766 1687 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 CTAGE15A4D2H0 777 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 A6NJR5 290 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 TBKBP1A7MCY6 615 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 HLA-DRAP01903 254 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 CTAGE8P0CG41 777 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 SOX10P56693 466 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 RPS6KA1Q15418 735 aa8.34□□□□□ -1.07
LRP6-206ENST00000543091 SEPT7Q16181 437 aaKnown RBP8.34□□□□□ -1.07
LRP6-206ENST00000543091 CTAGE6Q86UF2 777 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms