RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 CENPHQ9H3R5 247 aa13.49□□□□□ -0.25
DDX55-206ENST00000539934 SATB2Q9UPW6 733 aa13.49□□□□□ -0.25
DDX55-206ENST00000539934 VWA3AA6NCI4 1184 aa13.49□□□□□ -0.25
DDX55-206ENST00000539934 KPNA6O60684 536 aa13.49□□□□□ -0.25
DDX55-206ENST00000539934 ATG7O95352 703 aa13.49□□□□□ -0.25
DDX55-206ENST00000539934 B2MP61769 119 aa13.49□□□□□ -0.25
DDX55-206ENST00000539934 PNOCQ13519 176 aa13.49□□□□□ -0.25
DDX55-206ENST00000539934 ACCSLQ4AC99 568 aa13.49□□□□□ -0.25
DDX55-206ENST00000539934 DCAF15Q66K64 600 aa13.49□□□□□ -0.25
DDX55-206ENST00000539934 GADL1Q6ZQY3 521 aa13.49□□□□□ -0.25
DDX55-206ENST00000539934 ARHGAP18Q8N392 663 aa13.49□□□□□ -0.25
DDX55-206ENST00000539934 GALNT6Q8NCL4 622 aa13.49□□□□□ -0.25
DDX55-206ENST00000539934 VCX3AQ9NNX9 186 aa13.49□□□□□ -0.25
DDX55-206ENST00000539934 ABCF3Q9NUQ8 709 aa13.49□□□□□ -0.25
DDX55-206ENST00000539934 NYAP2Q9P242 653 aa13.49□□□□□ -0.25
DDX55-206ENST00000539934 ALPK3Q96L96 1907 aa13.49□□□□□ -0.25
DDX55-206ENST00000539934 ASAP2O43150 1006 aa13.48□□□□□ -0.25
DDX55-206ENST00000539934 BUB1BO60566 1050 aaPredicted RBP13.48□□□□□ -0.25
DDX55-206ENST00000539934 POLR2EP19388 210 aaKnown RBP13.48□□□□□ -0.25
DDX55-206ENST00000539934 VARSP26640 1264 aaKnown RBP13.48□□□□□ -0.25
DDX55-206ENST00000539934 TWF2Q6IBS0 349 aaKnown RBP13.48□□□□□ -0.25
DDX55-206ENST00000539934 LVRNQ6Q4G3 990 aa13.48□□□□□ -0.25
DDX55-206ENST00000539934 USP49Q70CQ1 688 aa13.48□□□□□ -0.25
DDX55-206ENST00000539934 KCTD1Q719H9 257 aa13.48□□□□□ -0.25
DDX55-206ENST00000539934 METTL16Q86W50 562 aaKnown RBP13.48□□□□□ -0.25
DDX55-206ENST00000539934 FCHSD1Q86WN1 690 aa13.48□□□□□ -0.25
DDX55-206ENST00000539934 PDCD7Q8N8D1 485 aaKnown RBP13.48□□□□□ -0.25
DDX55-206ENST00000539934 CCDC89Q8N998 374 aa13.48□□□□□ -0.25
DDX55-206ENST00000539934 BRSK1Q8TDC3 778 aa13.48□□□□□ -0.25
DDX55-206ENST00000539934 IFT81Q8WYA0 676 aa13.48□□□□□ -0.25
DDX55-206ENST00000539934 MOV10L1Q9BXT6 1211 aaKnown RBP13.48□□□□□ -0.25
DDX55-206ENST00000539934 RHBDL2Q9NX52 303 aa13.48□□□□□ -0.25
DDX55-206ENST00000539934 SERTAD1Q9UHV2 236 aa13.48□□□□□ -0.25
DDX55-206ENST00000539934 ZHX2Q9Y6X8 837 aa13.48□□□□□ -0.25
DDX55-206ENST00000539934 TNPO2O14787 897 aaKnown RBP13.48□□□□□ -0.25
DDX55-206ENST00000539934 RPN1P04843 607 aaKnown RBP13.48□□□□□ -0.25
DDX55-206ENST00000539934 CLTAP09496 248 aa13.48□□□□□ -0.25
DDX55-206ENST00000539934 POLD2P49005 469 aa13.48□□□□□ -0.25
DDX55-206ENST00000539934 CENPAP49450 140 aa13.48□□□□□ -0.25
DDX55-206ENST00000539934 MXRA7P84157 204 aa13.48□□□□□ -0.25
DDX55-206ENST00000539934 KIF5AQ12840 1032 aa13.48□□□□□ -0.25
DDX55-206ENST00000539934 ACAP1Q15027 740 aa13.48□□□□□ -0.25
DDX55-206ENST00000539934 DPCR1Q3MIW9 517 aa13.48□□□□□ -0.25
DDX55-206ENST00000539934 C3orf62Q6ZUJ4 267 aa13.48□□□□□ -0.25
DDX55-206ENST00000539934 TAOK1Q7L7X3 1001 aa13.48□□□□□ -0.25
DDX55-206ENST00000539934 KRT25Q7Z3Z0 450 aa13.48□□□□□ -0.25
DDX55-206ENST00000539934 FAM83AQ86UY5 434 aa13.48□□□□□ -0.25
DDX55-206ENST00000539934 MCF2L2Q86YR7 1114 aa13.48□□□□□ -0.25
DDX55-206ENST00000539934 SPACA7Q96KW9 195 aa13.48□□□□□ -0.25
DDX55-206ENST00000539934 FAM161BQ96MY7 647 aa13.48□□□□□ -0.25
DDX55-206ENST00000539934 PARK7Q99497 189 aaKnown RBP13.48□□□□□ -0.25
DDX55-206ENST00000539934 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.48□□□□□ -0.25
DDX55-206ENST00000539934 KCNH4Q9UQ05 1017 aa13.48□□□□□ -0.25
DDX55-206ENST00000539934 MGAMO43451 1857 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 FOXN3O00409 490 aaPredicted RBP13.47□□□□□ -0.25
DDX55-206ENST00000539934 PAHP00439 452 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 MRPS35P82673 323 aaKnown RBP13.47□□□□□ -0.25
DDX55-206ENST00000539934 TRIM32Q13049 653 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 TTBK2Q6IQ55 1244 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 ADGRF4Q8IZF3 695 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 ANKRD13CQ8N6S4 541 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 FAM151AQ8WW52 585 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 SYMPKQ92797 1274 aaKnown RBP13.47□□□□□ -0.25
DDX55-206ENST00000539934 COA7Q96BR5 231 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 SNF8Q96H20 258 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 ZNF570Q96NI8 536 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 FNBP1Q96RU3 617 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 OCEL1Q9H607 264 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 JMJD4Q9H9V9 463 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 PARVBQ9HBI1 364 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 NDFIP2Q9NV92 336 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 HERC5Q9UII4 1024 aaKnown RBP13.47□□□□□ -0.25
DDX55-206ENST00000539934 TUBE1Q9UJT0 475 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 TTC28Q96AY4 2481 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 TMEM238LA0A1B0GVL6 79 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 ESYT2A0FGR8 921 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 USP27XA6NNY8 438 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 RNASEH2AO75792 299 aaKnown RBP13.47□□□□□ -0.25
DDX55-206ENST00000539934 SLC1A4P43007 532 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 KCNJ6P48051 423 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 PDE6CP51160 858 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 GPC3P51654 580 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 GJA9P57773 515 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 MYO1EQ12965 1108 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 NONOQ15233 471 aaKnown RBP eCLIP13.47□□□□□ -0.25
DDX55-206ENST00000539934 SLFN13Q68D06 897 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 SNX32Q86XE0 403 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 REXO1Q8N1G1 1221 aaKnown RBP13.47□□□□□ -0.25
DDX55-206ENST00000539934 AOPEPQ8N6M6 819 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 DCAF4Q8WV16 495 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 DHX58Q96C10 678 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 COL25A1Q9BXS0 654 aaPredicted RBP13.47□□□□□ -0.25
DDX55-206ENST00000539934 TRIM5Q9C035 493 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 ZNF180Q9UJW8 692 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 SLC4A7Q9Y6M7 1214 aa13.47□□□□□ -0.25
DDX55-206ENST00000539934 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.46□□□□□ -0.25
DDX55-206ENST00000539934 PNMA6FA0A0J9YX94 578 aa13.46□□□□□ -0.25
DDX55-206ENST00000539934 POTEB2H3BUK9 544 aa13.46□□□□□ -0.25
DDX55-206ENST00000539934 GH2P01242 217 aa13.46□□□□□ -0.25
DDX55-206ENST00000539934 AARSP49588 968 aaKnown RBP eCLIP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms