RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 RUFY3Q7L099 469 aa15.57■□□□□ 0.08
SMARCA4-206ENST00000538456 TPH2Q8IWU9 490 aa15.57■□□□□ 0.08
SMARCA4-206ENST00000538456 GSTCDQ8NEC7 633 aa15.57■□□□□ 0.08
SMARCA4-206ENST00000538456 ASAP3Q8TDY4 903 aa15.57■□□□□ 0.08
SMARCA4-206ENST00000538456 PAAF1Q9BRP4 392 aa15.57■□□□□ 0.08
SMARCA4-206ENST00000538456 ZSWIM4Q9H7M6 989 aa15.57■□□□□ 0.08
SMARCA4-206ENST00000538456 PARP2Q9UGN5 583 aa15.57■□□□□ 0.08
SMARCA4-206ENST00000538456 SPTBN2O15020 2390 aa15.57■□□□□ 0.08
SMARCA4-206ENST00000538456 DTNBO60941 627 aa15.56■□□□□ 0.08
SMARCA4-206ENST00000538456 TADA2AO75478 443 aa15.56■□□□□ 0.08
SMARCA4-206ENST00000538456 GRIK3Q13003 919 aa15.56■□□□□ 0.08
SMARCA4-206ENST00000538456 LIN9Q5TKA1 542 aa15.56■□□□□ 0.08
SMARCA4-206ENST00000538456 PPP4R3AQ6IN85 833 aa15.56■□□□□ 0.08
SMARCA4-206ENST00000538456 CPLX2Q6PUV4 134 aaKnown RBP15.56■□□□□ 0.08
SMARCA4-206ENST00000538456 PIK3AP1Q6ZUJ8 805 aa15.56■□□□□ 0.08
SMARCA4-206ENST00000538456 CENPQQ7L2Z9 268 aaPredicted RBP15.56■□□□□ 0.08
SMARCA4-206ENST00000538456 CEP57Q86XR8 500 aa15.56■□□□□ 0.08
SMARCA4-206ENST00000538456 MAML2Q8IZL2 1156 aaPredicted RBP15.56■□□□□ 0.08
SMARCA4-206ENST00000538456 SHDQ96IW2 340 aa15.56■□□□□ 0.08
SMARCA4-206ENST00000538456 PHF20Q9BVI0 1012 aa15.56■□□□□ 0.08
SMARCA4-206ENST00000538456 SPATA6Q9NWH7 488 aaPredicted RBP15.56■□□□□ 0.08
SMARCA4-206ENST00000538456 FBXW11Q9UKB1 542 aa15.56■□□□□ 0.08
SMARCA4-206ENST00000538456 CDH7Q9ULB5 785 aa15.56■□□□□ 0.08
SMARCA4-206ENST00000538456 POLIQ9UNA4 740 aa15.56■□□□□ 0.08
SMARCA4-206ENST00000538456 SF3B1O75533 1304 aaKnown RBP eCLIP15.56■□□□□ 0.08
SMARCA4-206ENST00000538456 CACNA1BQ00975 2339 aa15.56■□□□□ 0.08
SMARCA4-206ENST00000538456 VWA8A3KMH1 1905 aa15.55■□□□□ 0.08
SMARCA4-206ENST00000538456 CASTOR2A6NHX0 329 aa15.55■□□□□ 0.08
SMARCA4-206ENST00000538456 TBX3O15119 743 aa15.55■□□□□ 0.08
SMARCA4-206ENST00000538456 CCL16O15467 120 aa15.55■□□□□ 0.08
SMARCA4-206ENST00000538456 KINO60870 393 aaKnown RBP15.55■□□□□ 0.08
SMARCA4-206ENST00000538456 C1RP00736 705 aa15.55■□□□□ 0.08
SMARCA4-206ENST00000538456 STARD6P59095 220 aa15.55■□□□□ 0.08
SMARCA4-206ENST00000538456 SPIRE1Q08AE8 756 aa15.55■□□□□ 0.08
SMARCA4-206ENST00000538456 HSP90AA2PQ14568 343 aaPredicted RBP15.55■□□□□ 0.08
SMARCA4-206ENST00000538456 UBXN2BQ14CS0 331 aa15.55■□□□□ 0.08
SMARCA4-206ENST00000538456 PPM1LQ5SGD2 360 aa15.55■□□□□ 0.08
SMARCA4-206ENST00000538456 SLC27A1Q6PCB7 646 aa15.55■□□□□ 0.08
SMARCA4-206ENST00000538456 OXER1Q8TDS5 423 aa15.55■□□□□ 0.08
SMARCA4-206ENST00000538456 CCDC43Q96MW1 224 aaKnown RBP15.55■□□□□ 0.08
SMARCA4-206ENST00000538456 GJB4Q9NTQ9 266 aa15.55■□□□□ 0.08
SMARCA4-206ENST00000538456 MTF2Q9Y483 593 aaPredicted RBP15.55■□□□□ 0.08
SMARCA4-206ENST00000538456 ZFP37Q9Y6Q3 630 aaPredicted RBP15.55■□□□□ 0.08
SMARCA4-206ENST00000538456 KANSL1LA0AUZ9 987 aa15.54■□□□□ 0.08
SMARCA4-206ENST00000538456 KIF4AO95239 1232 aa15.54■□□□□ 0.08
SMARCA4-206ENST00000538456 C8AP07357 584 aa15.54■□□□□ 0.08
SMARCA4-206ENST00000538456 GLRA2P23416 452 aa15.54■□□□□ 0.08
SMARCA4-206ENST00000538456 MLF2Q15773 248 aaPredicted RBP15.54■□□□□ 0.08
SMARCA4-206ENST00000538456 PSMD5Q16401 504 aa15.54■□□□□ 0.08
SMARCA4-206ENST00000538456 FAM171A1Q5VUB5 890 aa15.54■□□□□ 0.08
SMARCA4-206ENST00000538456 IFNLR1Q8IU57 520 aaPredicted RBP15.54■□□□□ 0.08
SMARCA4-206ENST00000538456 GPR65Q8IYL9 337 aa15.54■□□□□ 0.08
SMARCA4-206ENST00000538456 FAM177A1Q8N128 213 aaPredicted RBP15.54■□□□□ 0.08
SMARCA4-206ENST00000538456 SUMF1Q8NBK3 374 aa15.54■□□□□ 0.08
SMARCA4-206ENST00000538456 FGF13Q92913 245 aa15.54■□□□□ 0.08
SMARCA4-206ENST00000538456 ZNF274Q96GC6 653 aaPredicted RBP15.54■□□□□ 0.08
SMARCA4-206ENST00000538456 KXD1Q9BQD3 176 aa15.54■□□□□ 0.08
SMARCA4-206ENST00000538456 CLSTN3Q9BQT9 956 aa15.54■□□□□ 0.08
SMARCA4-206ENST00000538456 TTPALQ9BTX7 342 aa15.54■□□□□ 0.08
SMARCA4-206ENST00000538456 BCO2Q9BYV7 579 aa15.54■□□□□ 0.08
SMARCA4-206ENST00000538456 POLR3FQ9H1D9 316 aaPredicted RBP15.54■□□□□ 0.08
SMARCA4-206ENST00000538456 CYP46A1Q9Y6A2 500 aa15.54■□□□□ 0.08
SMARCA4-206ENST00000538456 EPG5Q9HCE0 2579 aa15.54■□□□□ 0.08
SMARCA4-206ENST00000538456 TPRP12270 2363 aaKnown RBP15.54■□□□□ 0.08
SMARCA4-206ENST00000538456 FAM205CA6NFA0 338 aa15.53■□□□□ 0.08
SMARCA4-206ENST00000538456 LAMTOR5O43504 91 aa15.53■□□□□ 0.08
SMARCA4-206ENST00000538456 SLITRK3O94933 977 aa15.53■□□□□ 0.08
SMARCA4-206ENST00000538456 REC8O95072 547 aa15.53■□□□□ 0.08
SMARCA4-206ENST00000538456 HNRNPA1P09651 372 aaKnown RBP eCLIP15.53■□□□□ 0.08
SMARCA4-206ENST00000538456 CD72P21854 359 aa15.53■□□□□ 0.08
SMARCA4-206ENST00000538456 POU5F1BQ06416 359 aa15.53■□□□□ 0.08
SMARCA4-206ENST00000538456 RSPO4Q2I0M5 234 aaPredicted RBP15.53■□□□□ 0.08
SMARCA4-206ENST00000538456 EARS2Q5JPH6 523 aaKnown RBP15.53■□□□□ 0.08
SMARCA4-206ENST00000538456 MTSS1LQ765P7 747 aa15.53■□□□□ 0.08
SMARCA4-206ENST00000538456 SLFN12Q8IYM2 578 aa15.53■□□□□ 0.08
SMARCA4-206ENST00000538456 ITFG1Q8TB96 612 aa15.53■□□□□ 0.08
SMARCA4-206ENST00000538456 EIF2AK1Q9BQI3 630 aaKnown RBP15.53■□□□□ 0.08
SMARCA4-206ENST00000538456 ZSWIM6Q9HCJ5 1215 aa15.53■□□□□ 0.08
SMARCA4-206ENST00000538456 DLL3Q9NYJ7 618 aa15.53■□□□□ 0.08
SMARCA4-206ENST00000538456 NCDNQ9UBB6 729 aa15.53■□□□□ 0.08
SMARCA4-206ENST00000538456 NOTCH4Q99466 2003 aa15.53■□□□□ 0.08
SMARCA4-206ENST00000538456 A0A087WWV3 80 aa15.52■□□□□ 0.08
SMARCA4-206ENST00000538456 A0A1B0GUA9 196 aa15.52■□□□□ 0.08
SMARCA4-206ENST00000538456 LRRIQ4A6NIV6 560 aa15.52■□□□□ 0.08
SMARCA4-206ENST00000538456 FAM170BA6NMN3 283 aa15.52■□□□□ 0.08
SMARCA4-206ENST00000538456 ADAM12O43184 909 aa15.52■□□□□ 0.08
SMARCA4-206ENST00000538456 DGAT1O75907 488 aa15.52■□□□□ 0.08
SMARCA4-206ENST00000538456 BAG4O95429 457 aaKnown RBP15.52■□□□□ 0.08
SMARCA4-206ENST00000538456 ARL2P36404 184 aa15.52■□□□□ 0.08
SMARCA4-206ENST00000538456 CSTF1Q05048 431 aaKnown RBP15.52■□□□□ 0.08
SMARCA4-206ENST00000538456 TUSC3Q13454 348 aa15.52■□□□□ 0.08
SMARCA4-206ENST00000538456 SLC44A4Q53GD3 710 aa15.52■□□□□ 0.08
SMARCA4-206ENST00000538456 MAEAQ7L5Y9 396 aa15.52■□□□□ 0.08
SMARCA4-206ENST00000538456 SLC7A14Q8TBB6 771 aa15.52■□□□□ 0.08
SMARCA4-206ENST00000538456 ING5Q8WYH8 240 aa15.52■□□□□ 0.08
SMARCA4-206ENST00000538456 PIK3R5Q8WYR1 880 aa15.52■□□□□ 0.08
SMARCA4-206ENST00000538456 NAP1L4Q99733 375 aaKnown RBP15.52■□□□□ 0.08
SMARCA4-206ENST00000538456 NFKBIZQ9BYH8 718 aa15.52■□□□□ 0.08
SMARCA4-206ENST00000538456 HCFC1R1Q9NWW0 138 aa15.52■□□□□ 0.08
SMARCA4-206ENST00000538456 ZMYM2Q9UBW7 1377 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms