RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 ZNF112Q9UJU3 913 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 USP18Q9UMW8 372 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 DMTF1Q9Y222 760 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 MSRB2Q9Y3D2 182 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 KDM2BQ8NHM5 1336 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 CCDC163A0A0D9SF12 145 aa1.37□□□□□ -2.19
COPB1-212ENST00000534771 PTPDC1A2A3K4 754 aa1.37□□□□□ -2.19
COPB1-212ENST00000534771 CCDC85CA6NKD9 419 aa1.37□□□□□ -2.19
COPB1-212ENST00000534771 B4E1Z4 1266 aa1.37□□□□□ -2.19
COPB1-212ENST00000534771 M0R2C6 588 aa1.37□□□□□ -2.19
COPB1-212ENST00000534771 KCNQ2O43526 872 aa1.37□□□□□ -2.19
COPB1-212ENST00000534771 PRKCGP05129 697 aa1.37□□□□□ -2.19
COPB1-212ENST00000534771 ELANEP08246 267 aa1.37□□□□□ -2.19
COPB1-212ENST00000534771 TNFRSF1BP20333 461 aa1.37□□□□□ -2.19
COPB1-212ENST00000534771 CHN2P52757 468 aa1.37□□□□□ -2.19
COPB1-212ENST00000534771 FHL1Q13642 323 aa1.37□□□□□ -2.19
COPB1-212ENST00000534771 UBE3CQ15386 1083 aa1.37□□□□□ -2.19
COPB1-212ENST00000534771 EZH2Q15910 746 aaKnown RBP1.37□□□□□ -2.19
COPB1-212ENST00000534771 AGAP9Q5VTM2 703 aa1.37□□□□□ -2.19
COPB1-212ENST00000534771 B3GNTL1Q67FW5 361 aaPredicted RBP1.37□□□□□ -2.19
COPB1-212ENST00000534771 ZNF517Q6ZMY9 492 aaPredicted RBP1.37□□□□□ -2.19
COPB1-212ENST00000534771 PDZD4Q76G19 769 aaPredicted RBP1.37□□□□□ -2.19
COPB1-212ENST00000534771 RHOT2Q8IXI1 618 aa1.37□□□□□ -2.19
COPB1-212ENST00000534771 CDYL2Q8N8U2 506 aa1.37□□□□□ -2.19
COPB1-212ENST00000534771 CHST14Q8NCH0 376 aa1.37□□□□□ -2.19
COPB1-212ENST00000534771 ACTRT2Q8TDY3 377 aa1.37□□□□□ -2.19
COPB1-212ENST00000534771 GAB3Q8WWW8 586 aa1.37□□□□□ -2.19
COPB1-212ENST00000534771 DDB2Q92466 427 aa1.37□□□□□ -2.19
COPB1-212ENST00000534771 RTF1Q92541 710 aaKnown RBP1.37□□□□□ -2.19
COPB1-212ENST00000534771 PTCD3Q96EY7 689 aaKnown RBP1.37□□□□□ -2.19
COPB1-212ENST00000534771 BOD1Q96IK1 185 aa1.37□□□□□ -2.19
COPB1-212ENST00000534771 PHACTR3Q96KR7 559 aa1.37□□□□□ -2.19
COPB1-212ENST00000534771 UROC1Q96N76 676 aa1.37□□□□□ -2.19
COPB1-212ENST00000534771 GMLQ99445 158 aa1.37□□□□□ -2.19
COPB1-212ENST00000534771 ELF4Q99607 663 aaPredicted RBP1.37□□□□□ -2.19
COPB1-212ENST00000534771 AIFM2Q9BRQ8 373 aa1.37□□□□□ -2.19
COPB1-212ENST00000534771 REXO4Q9GZR2 422 aaKnown RBP1.37□□□□□ -2.19
COPB1-212ENST00000534771 POFUT1Q9H488 388 aa1.37□□□□□ -2.19
COPB1-212ENST00000534771 IL17RBQ9NRM6 502 aa1.37□□□□□ -2.19
COPB1-212ENST00000534771 SAMD15Q9P1V8 674 aa1.37□□□□□ -2.19
COPB1-212ENST00000534771 KIAA1522Q9P206 1035 aaPredicted RBP1.37□□□□□ -2.19
COPB1-212ENST00000534771 PPP1R1BQ9UD71 204 aaPredicted RBP1.37□□□□□ -2.19
COPB1-212ENST00000534771 PCDHB6Q9Y5E3 794 aa1.37□□□□□ -2.19
COPB1-212ENST00000534771 SPO11Q9Y5K1 396 aa1.37□□□□□ -2.19
COPB1-212ENST00000534771 ZNF804BA4D1E1 1349 aa1.37□□□□□ -2.19
COPB1-212ENST00000534771 ZNF521Q96K83 1311 aa1.37□□□□□ -2.19
COPB1-212ENST00000534771 A0A1W2PR48 441 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 CCDC151A5D8V7 595 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 WIPF3A6NGB9 483 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 MANSC4A6NHS7 340 aaPredicted RBP1.36□□□□□ -2.19
COPB1-212ENST00000534771 H3BNC9 293 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 ELL2O00472 640 aaPredicted RBP1.36□□□□□ -2.19
COPB1-212ENST00000534771 ORC4O43929 436 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 NRP2O60462 931 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 SEC24DO94855 1032 aaPredicted RBP1.36□□□□□ -2.19
COPB1-212ENST00000534771 GAS8-AS1O95177 125 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 GASTP01350 101 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 WT1P19544 449 aaPredicted RBP1.36□□□□□ -2.19
COPB1-212ENST00000534771 GPD1P21695 349 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 FOLR3P41439 243 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 GPR15P49685 360 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 SOX10P56693 466 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 NRG3P56975 720 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 CLRN1P58418 232 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 SSBP2P81877 361 aaPredicted RBP1.36□□□□□ -2.19
COPB1-212ENST00000534771 EXOSC10Q01780 885 aaKnown RBP1.36□□□□□ -2.19
COPB1-212ENST00000534771 HYAL1Q12794 435 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 EIF2B5Q13144 721 aaKnown RBP1.36□□□□□ -2.19
COPB1-212ENST00000534771 GRM1Q13255 1194 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 CCDC178Q5BJE1 867 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 C19orf54Q5BKX5 351 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 MTX3Q5HYI7 312 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 FAM47AQ5JRC9 791 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 ATXN7L2Q5T6C5 722 aaPredicted RBP1.36□□□□□ -2.19
COPB1-212ENST00000534771 LCE1CQ5T751 118 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 LCE1BQ5T7P3 118 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 ZCCHC8Q6NZY4 707 aaKnown RBP1.36□□□□□ -2.19
COPB1-212ENST00000534771 LMBR1LQ6UX01 489 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 KRTAP5-5Q701N2 237 aaPredicted RBP1.36□□□□□ -2.19
COPB1-212ENST00000534771 MED25Q71SY5 747 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 FGD2Q7Z6J4 655 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 CKAP2LQ8IYA6 745 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 MSL3Q8N5Y2 521 aaKnown RBP1.36□□□□□ -2.19
COPB1-212ENST00000534771 SLC43A3Q8NBI5 491 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 RNF169Q8NCN4 708 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 OR56A1Q8NGH5 318 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 HASPINQ8TF76 798 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 DPF1Q92782 380 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 RPL36ALQ969Q0 106 aaKnown RBP1.36□□□□□ -2.19
COPB1-212ENST00000534771 RGMAQ96B86 450 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 NEU1Q99519 415 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 TINF2Q9BSI4 451 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 MRPL4Q9BYD3 311 aaKnown RBP1.36□□□□□ -2.19
COPB1-212ENST00000534771 BHMT2Q9H2M3 363 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 CPNE5Q9HCH3 593 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 GALNT9Q9HCQ5 603 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 TOMM22Q9NS69 142 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 KLHL11Q9NVR0 708 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 IFT57Q9NWB7 429 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 SLTMQ9NWH9 1034 aaKnown RBP eCLIP1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms