RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 CPT1CQ8TCG5 803 aa3.96□□□□□ -1.78
COPB1-205ENST00000526527 MORC4Q8TE76 937 aa3.96□□□□□ -1.78
COPB1-205ENST00000526527 SSH1Q8WYL5 1049 aa3.96□□□□□ -1.78
COPB1-205ENST00000526527 MTMR8Q96EF0 704 aa3.96□□□□□ -1.78
COPB1-205ENST00000526527 ZNF768Q9H5H4 540 aaKnown RBP3.96□□□□□ -1.78
COPB1-205ENST00000526527 C14orf93Q9H972 538 aaKnown RBP3.96□□□□□ -1.78
COPB1-205ENST00000526527 H2AFY2Q9P0M6 372 aaPredicted RBP3.96□□□□□ -1.78
COPB1-205ENST00000526527 ZBTB21Q9ULJ3 1066 aa3.96□□□□□ -1.78
COPB1-205ENST00000526527 SPEF1Q9Y4P9 236 aa3.96□□□□□ -1.78
COPB1-205ENST00000526527 MRFAP1Q9Y605 127 aa3.96□□□□□ -1.78
COPB1-205ENST00000526527 MROH2BQ7Z745 1585 aa3.96□□□□□ -1.78
COPB1-205ENST00000526527 SMARCA4P51532 1647 aa3.95□□□□□ -1.78
COPB1-205ENST00000526527 PRPF6O94906 941 aaKnown RBP3.95□□□□□ -1.78
COPB1-205ENST00000526527 GPR15P49685 360 aa3.95□□□□□ -1.78
COPB1-205ENST00000526527 EXOSC10Q01780 885 aaKnown RBP3.95□□□□□ -1.78
COPB1-205ENST00000526527 ITKQ08881 620 aa3.95□□□□□ -1.78
COPB1-205ENST00000526527 RALBP1Q15311 655 aa3.95□□□□□ -1.78
COPB1-205ENST00000526527 DCAF17Q5H9S7 520 aaPredicted RBP3.95□□□□□ -1.78
COPB1-205ENST00000526527 ESRP1Q6NXG1 681 aaKnown RBP3.95□□□□□ -1.78
COPB1-205ENST00000526527 CASC1Q6TDU7 716 aa3.95□□□□□ -1.78
COPB1-205ENST00000526527 FAM180AQ6UWF9 173 aa3.95□□□□□ -1.78
COPB1-205ENST00000526527 APBB1IPQ7Z5R6 666 aaPredicted RBP3.95□□□□□ -1.78
COPB1-205ENST00000526527 CDYL2Q8N8U2 506 aa3.95□□□□□ -1.78
COPB1-205ENST00000526527 CLRN3Q8NCR9 226 aa3.95□□□□□ -1.78
COPB1-205ENST00000526527 RTF1Q92541 710 aaKnown RBP3.95□□□□□ -1.78
COPB1-205ENST00000526527 ZNF622Q969S3 477 aaKnown RBP eCLIP3.95□□□□□ -1.78
COPB1-205ENST00000526527 RAX2Q96IS3 184 aa3.95□□□□□ -1.78
COPB1-205ENST00000526527 PCGF6Q9BYE7 350 aa3.95□□□□□ -1.78
COPB1-205ENST00000526527 POFUT1Q9H488 388 aa3.95□□□□□ -1.78
COPB1-205ENST00000526527 ZMAT4Q9H898 229 aa3.95□□□□□ -1.78
COPB1-205ENST00000526527 TGM5O43548 720 aa3.94□□□□□ -1.78
COPB1-205ENST00000526527 B3GALT2O43825 422 aa3.94□□□□□ -1.78
COPB1-205ENST00000526527 SCAF4O95104 1147 aaKnown RBP3.94□□□□□ -1.78
COPB1-205ENST00000526527 S100BP04271 92 aaPredicted RBP3.94□□□□□ -1.78
COPB1-205ENST00000526527 SLC5A3P53794 718 aa3.94□□□□□ -1.78
COPB1-205ENST00000526527 TIGD2Q4W5G0 525 aa3.94□□□□□ -1.78
COPB1-205ENST00000526527 HECTD2Q5U5R9 776 aa3.94□□□□□ -1.78
COPB1-205ENST00000526527 RD3Q7Z3Z2 195 aa3.94□□□□□ -1.78
COPB1-205ENST00000526527 GLB1L2Q8IW92 636 aa3.94□□□□□ -1.78
COPB1-205ENST00000526527 TMTC2Q8N394 836 aa3.94□□□□□ -1.78
COPB1-205ENST00000526527 CNTD1Q8N815 330 aa3.94□□□□□ -1.78
COPB1-205ENST00000526527 BEND2Q8NDZ0 799 aa3.94□□□□□ -1.78
COPB1-205ENST00000526527 TRIM44Q96DX7 344 aaPredicted RBP3.94□□□□□ -1.78
COPB1-205ENST00000526527 SOX7Q9BT81 388 aa3.94□□□□□ -1.78
COPB1-205ENST00000526527 MYL10Q9BUA6 226 aa3.94□□□□□ -1.78
COPB1-205ENST00000526527 BRIP1Q9BX63 1249 aa3.94□□□□□ -1.78
COPB1-205ENST00000526527 KRTAP1-5Q9BYS1 174 aa3.94□□□□□ -1.78
COPB1-205ENST00000526527 PITHD1Q9GZP4 211 aaPredicted RBP3.94□□□□□ -1.78
COPB1-205ENST00000526527 UBA5Q9GZZ9 404 aa3.94□□□□□ -1.78
COPB1-205ENST00000526527 ING3Q9NXR8 418 aa3.94□□□□□ -1.78
COPB1-205ENST00000526527 PHLDB1Q86UU1 1377 aa3.93□□□□□ -1.78
COPB1-205ENST00000526527 A0A0A6YYJ9 748 aa3.93□□□□□ -1.78
COPB1-205ENST00000526527 CENPVL1A0A0U1RR11 272 aa3.93□□□□□ -1.78
COPB1-205ENST00000526527 SHTN1A0MZ66 631 aa3.93□□□□□ -1.78
COPB1-205ENST00000526527 GOLGA8AA7E2F4 631 aa3.93□□□□□ -1.78
COPB1-205ENST00000526527 AHRRA9YTQ3 701 aa3.93□□□□□ -1.78
COPB1-205ENST00000526527 K7ESF4 209 aa3.93□□□□□ -1.78
COPB1-205ENST00000526527 TRIM24O15164 1050 aa3.93□□□□□ -1.78
COPB1-205ENST00000526527 MTSS1O43312 755 aa3.93□□□□□ -1.78
COPB1-205ENST00000526527 HOXA3O43365 443 aaPredicted RBP3.93□□□□□ -1.78
COPB1-205ENST00000526527 RECQL4O94761 1208 aa3.93□□□□□ -1.78
COPB1-205ENST00000526527 ONECUT2O95948 504 aa3.93□□□□□ -1.78
COPB1-205ENST00000526527 ID4P47928 161 aa3.93□□□□□ -1.78
COPB1-205ENST00000526527 CDKN1CP49918 316 aaPredicted RBP3.93□□□□□ -1.78
COPB1-205ENST00000526527 FAM189BP81408 668 aa3.93□□□□□ -1.78
COPB1-205ENST00000526527 KLF1Q13351 362 aaPredicted RBP3.93□□□□□ -1.78
COPB1-205ENST00000526527 FSCN1Q16658 493 aaKnown RBP3.93□□□□□ -1.78
COPB1-205ENST00000526527 UGT8Q16880 541 aa3.93□□□□□ -1.78
COPB1-205ENST00000526527 CCDC181Q5TID7 509 aa3.93□□□□□ -1.78
COPB1-205ENST00000526527 SYDE2Q5VT97 1194 aa3.93□□□□□ -1.78
COPB1-205ENST00000526527 CCDC62Q6P9F0 684 aa3.93□□□□□ -1.78
COPB1-205ENST00000526527 LMBR1LQ6UX01 489 aa3.93□□□□□ -1.78
COPB1-205ENST00000526527 UNQ6494/PRO21346Q6UXR6 183 aa3.93□□□□□ -1.78
COPB1-205ENST00000526527 KANSL1Q7Z3B3 1105 aa3.93□□□□□ -1.78
COPB1-205ENST00000526527 FAM9BQ8IZU0 186 aa3.93□□□□□ -1.78
COPB1-205ENST00000526527 SECISBP2LQ93073 1101 aaKnown RBP3.93□□□□□ -1.78
COPB1-205ENST00000526527 GPATCH3Q96I76 525 aa3.93□□□□□ -1.78
COPB1-205ENST00000526527 FAM193BQ96PV7 902 aaPredicted RBP3.93□□□□□ -1.78
COPB1-205ENST00000526527 CPPED1Q9BRF8 314 aaPredicted RBP3.93□□□□□ -1.78
COPB1-205ENST00000526527 NOL10Q9BSC4 688 aaKnown RBP3.93□□□□□ -1.78
COPB1-205ENST00000526527 ENKD1Q9H0I2 346 aa3.93□□□□□ -1.78
COPB1-205ENST00000526527 R3HDMLQ9H3Y0 253 aa3.93□□□□□ -1.78
COPB1-205ENST00000526527 MTG2Q9H4K7 406 aa3.93□□□□□ -1.78
COPB1-205ENST00000526527 METTL14Q9HCE5 456 aaKnown RBP3.93□□□□□ -1.78
COPB1-205ENST00000526527 C14orf119Q9NWQ9 140 aa3.93□□□□□ -1.78
COPB1-205ENST00000526527 TERF2IPQ9NYB0 399 aa3.93□□□□□ -1.78
COPB1-205ENST00000526527 PCDHB6Q9Y5E3 794 aa3.93□□□□□ -1.78
COPB1-205ENST00000526527 NUMBLQ9Y6R0 609 aa3.93□□□□□ -1.78
COPB1-205ENST00000526527 BAZ1AQ9NRL2 1556 aaPredicted RBP3.93□□□□□ -1.78
COPB1-205ENST00000526527 ATAD2BQ9ULI0 1458 aa3.92□□□□□ -1.78
COPB1-205ENST00000526527 E2F8A0AVK6 867 aa3.92□□□□□ -1.78
COPB1-205ENST00000526527 LPXNO60711 386 aa3.92□□□□□ -1.78
COPB1-205ENST00000526527 OPHN1O60890 802 aa3.92□□□□□ -1.78
COPB1-205ENST00000526527 PPFIA4O75335 1185 aa3.92□□□□□ -1.78
COPB1-205ENST00000526527 PRKD3O94806 890 aa3.92□□□□□ -1.78
COPB1-205ENST00000526527 FSBPO95073 299 aa3.92□□□□□ -1.78
COPB1-205ENST00000526527 GYPEP15421 78 aa3.92□□□□□ -1.78
COPB1-205ENST00000526527 LAG3P18627 525 aa3.92□□□□□ -1.78
COPB1-205ENST00000526527 ENPP1P22413 925 aa3.92□□□□□ -1.78
COPB1-205ENST00000526527 CCND1P24385 295 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms