RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 ZSCAN20P17040 1043 aaPredicted RBP18.2■□□□□ 0.5
SREK1-212ENST00000522912 MORN1Q5T089 497 aa18.2■□□□□ 0.5
SREK1-212ENST00000522912 H2AFVQ71UI9 128 aa18.2■□□□□ 0.5
SREK1-212ENST00000522912 PALB2Q86YC2 1186 aa18.2■□□□□ 0.5
SREK1-212ENST00000522912 FAM71AQ8IYT1 594 aa18.2■□□□□ 0.5
SREK1-212ENST00000522912 SHC3Q92529 594 aa18.2■□□□□ 0.5
SREK1-212ENST00000522912 CAPZA3Q96KX2 299 aa18.2■□□□□ 0.5
SREK1-212ENST00000522912 AGPAT1Q99943 283 aa18.2■□□□□ 0.5
SREK1-212ENST00000522912 PI4K2AQ9BTU6 479 aa18.2■□□□□ 0.5
SREK1-212ENST00000522912 C2orf40Q9H1Z8 148 aa18.2■□□□□ 0.5
SREK1-212ENST00000522912 ZHX1Q9UKY1 873 aaPredicted RBP18.2■□□□□ 0.5
SREK1-212ENST00000522912 PCDHGC5Q9Y5F6 944 aa18.2■□□□□ 0.5
SREK1-212ENST00000522912 CNTNAP2Q9UHC6 1331 aa18.2■□□□□ 0.5
SREK1-212ENST00000522912 CTAGE15A4D2H0 777 aa18.2■□□□□ 0.5
SREK1-212ENST00000522912 MANSC4A6NHS7 340 aaPredicted RBP18.2■□□□□ 0.5
SREK1-212ENST00000522912 ABLIM1O14639 778 aa18.2■□□□□ 0.5
SREK1-212ENST00000522912 CLDN3O15551 220 aa18.2■□□□□ 0.5
SREK1-212ENST00000522912 FAM189A1O60320 539 aa18.2■□□□□ 0.5
SREK1-212ENST00000522912 PPFIA4O75335 1185 aa18.2■□□□□ 0.5
SREK1-212ENST00000522912 TOM1L1O75674 476 aa18.2■□□□□ 0.5
SREK1-212ENST00000522912 CTAGE8P0CG41 777 aa18.2■□□□□ 0.5
SREK1-212ENST00000522912 HARSP12081 509 aaKnown RBP18.2■□□□□ 0.5
SREK1-212ENST00000522912 H2AFXP16104 143 aaPredicted RBP18.2■□□□□ 0.5
SREK1-212ENST00000522912 TNNI1P19237 187 aa18.2■□□□□ 0.5
SREK1-212ENST00000522912 TNFAIP3P21580 790 aa18.2■□□□□ 0.5
SREK1-212ENST00000522912 MFAP3P55082 362 aa18.2■□□□□ 0.5
SREK1-212ENST00000522912 MAPK6Q16659 721 aa18.2■□□□□ 0.5
SREK1-212ENST00000522912 ZACNQ401N2 412 aa18.2■□□□□ 0.5
SREK1-212ENST00000522912 MTERF4Q7Z6M4 381 aaKnown RBP18.2■□□□□ 0.5
SREK1-212ENST00000522912 ZBTB33Q86T24 672 aa18.2■□□□□ 0.5
SREK1-212ENST00000522912 CTAGE6Q86UF2 777 aa18.2■□□□□ 0.5
SREK1-212ENST00000522912 CTAGE4Q8IX94 777 aa18.2■□□□□ 0.5
SREK1-212ENST00000522912 NLRP4Q96MN2 994 aa18.2■□□□□ 0.5
SREK1-212ENST00000522912 MMS19Q96T76 1030 aa18.2■□□□□ 0.5
SREK1-212ENST00000522912 TLR10Q9BXR5 811 aa18.2■□□□□ 0.5
SREK1-212ENST00000522912 INTUQ9ULD6 942 aa18.2■□□□□ 0.5
SREK1-212ENST00000522912 ZSWIM8A7E2V4 1837 aa18.19■□□□□ 0.5
SREK1-212ENST00000522912 GRID2IPA4D2P6 1211 aa18.19■□□□□ 0.5
SREK1-212ENST00000522912 USP8P40818 1118 aa18.19■□□□□ 0.5
SREK1-212ENST00000522912 GALCP54803 685 aa18.19■□□□□ 0.5
SREK1-212ENST00000522912 TAF1CQ15572 869 aaPredicted RBP18.19■□□□□ 0.5
SREK1-212ENST00000522912 TDRD10Q5VZ19 366 aaKnown RBP18.19■□□□□ 0.5
SREK1-212ENST00000522912 GPR161Q8N6U8 529 aaKnown RBP18.19■□□□□ 0.5
SREK1-212ENST00000522912 FZD8Q9H461 694 aa18.19■□□□□ 0.5
SREK1-212ENST00000522912 TAS2R14Q9NYV8 317 aa18.19■□□□□ 0.5
SREK1-212ENST00000522912 KAT6AQ92794 2004 aa18.18■□□□□ 0.5
SREK1-212ENST00000522912 TMCO5BA8MYB1 307 aa18.18■□□□□ 0.5
SREK1-212ENST00000522912 PDE2AO00408 941 aaPredicted RBP18.18■□□□□ 0.5
SREK1-212ENST00000522912 SGPL1O95470 568 aa18.18■□□□□ 0.5
SREK1-212ENST00000522912 VNN1O95497 513 aa18.18■□□□□ 0.5
SREK1-212ENST00000522912 HLA-DRAP01903 254 aa18.18■□□□□ 0.5
SREK1-212ENST00000522912 PRLRP16471 622 aa18.18■□□□□ 0.5
SREK1-212ENST00000522912 TNFSF9P41273 254 aa18.18■□□□□ 0.5
SREK1-212ENST00000522912 PTENP60484 403 aa18.18■□□□□ 0.5
SREK1-212ENST00000522912 TFDP1Q14186 410 aa18.18■□□□□ 0.5
SREK1-212ENST00000522912 IQSEC1Q6DN90 963 aa18.18■□□□□ 0.5
SREK1-212ENST00000522912 NFRKBQ6P4R8 1299 aa18.18■□□□□ 0.5
SREK1-212ENST00000522912 SAPCD2Q86UD0 394 aa18.18■□□□□ 0.5
SREK1-212ENST00000522912 LINC01465Q8N7H1 131 aa18.18■□□□□ 0.5
SREK1-212ENST00000522912 MINDY3Q9H8M7 445 aa18.18■□□□□ 0.5
SREK1-212ENST00000522912 ASAP2O43150 1006 aa18.18■□□□□ 0.5
SREK1-212ENST00000522912 CYP26A1O43174 497 aa18.18■□□□□ 0.5
SREK1-212ENST00000522912 FTCDO95954 541 aa18.18■□□□□ 0.5
SREK1-212ENST00000522912 MMP3P08254 477 aa18.18■□□□□ 0.5
SREK1-212ENST00000522912 HOXD8P13378 290 aaPredicted RBP18.18■□□□□ 0.5
SREK1-212ENST00000522912 CHRNB2P17787 502 aa18.18■□□□□ 0.5
SREK1-212ENST00000522912 HSP90AA2PQ14568 343 aaPredicted RBP18.18■□□□□ 0.5
SREK1-212ENST00000522912 PRAMEF19Q5SWL8 479 aa18.18■□□□□ 0.5
SREK1-212ENST00000522912 NOA1Q8NC60 698 aaKnown RBP18.18■□□□□ 0.5
SREK1-212ENST00000522912 OR6J1Q8NGC5 347 aa18.18■□□□□ 0.5
SREK1-212ENST00000522912 COG1Q8WTW3 980 aa18.18■□□□□ 0.5
SREK1-212ENST00000522912 OSBPL9Q96SU4 736 aa18.18■□□□□ 0.5
SREK1-212ENST00000522912 MAP7D2Q96T17 732 aa18.18■□□□□ 0.5
SREK1-212ENST00000522912 CGRRF1Q99675 332 aa18.18■□□□□ 0.5
SREK1-212ENST00000522912 TCHPQ9BT92 498 aa18.18■□□□□ 0.5
SREK1-212ENST00000522912 ACP6Q9NPH0 428 aa18.18■□□□□ 0.5
SREK1-212ENST00000522912 NOCTQ9UK39 431 aaKnown RBP18.18■□□□□ 0.5
SREK1-212ENST00000522912 H3BRB1 525 aa18.17■□□□□ 0.5
SREK1-212ENST00000522912 ACKR2O00590 384 aa18.17■□□□□ 0.5
SREK1-212ENST00000522912 ZC3H11AO75152 810 aaKnown RBP eCLIP18.17■□□□□ 0.5
SREK1-212ENST00000522912 MBTD1Q05BQ5 628 aa18.17■□□□□ 0.5
SREK1-212ENST00000522912 MCL1Q07820 350 aa18.17■□□□□ 0.5
SREK1-212ENST00000522912 MAP2K5Q13163 448 aa18.17■□□□□ 0.5
SREK1-212ENST00000522912 RGMBQ6NW40 437 aa18.17■□□□□ 0.5
SREK1-212ENST00000522912 NOP9Q86U38 636 aaKnown RBP18.17■□□□□ 0.5
SREK1-212ENST00000522912 CREG2Q8IUH2 290 aa18.17■□□□□ 0.5
SREK1-212ENST00000522912 BRSK2Q8IWQ3 736 aa18.17■□□□□ 0.5
SREK1-212ENST00000522912 RPUSD2Q8IZ73 545 aaKnown RBP18.17■□□□□ 0.5
SREK1-212ENST00000522912 MSL3Q8N5Y2 521 aaKnown RBP18.17■□□□□ 0.5
SREK1-212ENST00000522912 DHX38Q92620 1227 aaKnown RBP18.17■□□□□ 0.5
SREK1-212ENST00000522912 TUT1Q9H6E5 874 aaKnown RBP18.17■□□□□ 0.5
SREK1-212ENST00000522912 PTPRHQ9HD43 1115 aa18.17■□□□□ 0.5
SREK1-212ENST00000522912 ZCCHC17Q9NP64 241 aaKnown RBP18.17■□□□□ 0.5
SREK1-212ENST00000522912 SEPT11Q9NVA2 429 aaKnown RBP18.17■□□□□ 0.5
SREK1-212ENST00000522912 SLC5A4Q9NY91 659 aa18.17■□□□□ 0.5
SREK1-212ENST00000522912 FLRT1Q9NZU1 646 aa18.17■□□□□ 0.5
SREK1-212ENST00000522912 HYOU1Q9Y4L1 999 aa18.17■□□□□ 0.5
SREK1-212ENST00000522912 MGAMO43451 1857 aa18.17■□□□□ 0.5
SREK1-212ENST00000522912 A0A0A6YYK5 440 aaPredicted RBP18.16■□□□□ 0.5
SREK1-212ENST00000522912 FAM170AA1A519 330 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms