RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 TBX20Q9UMR3 447 aa12.02□□□□□ -0.48
PCDHGB4-201ENST00000519479 LAMB4A4D0S4 1761 aa12.02□□□□□ -0.49
PCDHGB4-201ENST00000519479 EXOC1LA0A1B0GW35 172 aa12.02□□□□□ -0.49
PCDHGB4-201ENST00000519479 MAP2K7O14733 419 aa12.02□□□□□ -0.49
PCDHGB4-201ENST00000519479 GGPS1O95749 300 aa12.02□□□□□ -0.49
PCDHGB4-201ENST00000519479 GUCY2CP25092 1073 aa12.02□□□□□ -0.49
PCDHGB4-201ENST00000519479 MKRN4PQ13434 485 aaPredicted RBP12.02□□□□□ -0.49
PCDHGB4-201ENST00000519479 TCP11Q8WWU5 503 aa12.02□□□□□ -0.49
PCDHGB4-201ENST00000519479 SREK1Q8WXA9 508 aaKnown RBP12.02□□□□□ -0.49
PCDHGB4-201ENST00000519479 FAM167AQ96KS9 214 aa12.02□□□□□ -0.49
PCDHGB4-201ENST00000519479 CARD9Q9H257 536 aa12.02□□□□□ -0.49
PCDHGB4-201ENST00000519479 ZWILCHQ9H900 591 aa12.02□□□□□ -0.49
PCDHGB4-201ENST00000519479 EIF3HO15372 352 aaKnown RBP eCLIP12.02□□□□□ -0.49
PCDHGB4-201ENST00000519479 HNRNPH3P31942 346 aaKnown RBP12.02□□□□□ -0.49
PCDHGB4-201ENST00000519479 CIITAP33076 1130 aa12.02□□□□□ -0.49
PCDHGB4-201ENST00000519479 IL9RQ01113 521 aa12.02□□□□□ -0.49
PCDHGB4-201ENST00000519479 ITIH3Q06033 890 aa12.02□□□□□ -0.49
PCDHGB4-201ENST00000519479 ZNF699Q32M78 642 aa12.02□□□□□ -0.49
PCDHGB4-201ENST00000519479 ZNF667Q5HYK9 610 aa12.02□□□□□ -0.49
PCDHGB4-201ENST00000519479 NLRP14Q86W24 1093 aa12.02□□□□□ -0.49
PCDHGB4-201ENST00000519479 SLC5A5Q92911 643 aa12.02□□□□□ -0.49
PCDHGB4-201ENST00000519479 SMC6Q96SB8 1091 aa12.02□□□□□ -0.49
PCDHGB4-201ENST00000519479 STK38LQ9Y2H1 464 aa12.02□□□□□ -0.49
PCDHGB4-201ENST00000519479 GLI3P10071 1580 aa12.02□□□□□ -0.49
PCDHGB4-201ENST00000519479 TJP3O95049 919 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 ZNF131P52739 623 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 ATP11AP98196 1134 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 PPP2R5CQ13362 524 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 ZNF568Q3ZCX4 644 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 TADA2BQ86TJ2 420 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 JAMLQ86YT9 394 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 MAP7D3Q8IWC1 876 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 GDAP1Q8TB36 358 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 CFAP57Q96MR6 1250 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 APOL6Q9BWW8 343 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 FGFBP2Q9BYJ0 223 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 CASZ1Q86V15 1759 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 PHF2O75151 1096 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 NPM3O75607 178 aaKnown RBP12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 STK10O94804 968 aaKnown RBP12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 CYP3A4P08684 503 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 CLTAP09496 248 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 FGFR4P22455 802 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 PSMA2P25787 234 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 SRLQ86TD4 932 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 SESTD1Q86VW0 696 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 RHPN2Q8IUC4 686 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 RHOT1Q8IXI2 618 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 KCTD6Q8NC69 237 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 ETNPPLQ8TBG4 499 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 CCHCR1Q8TD31 782 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 SYTL5Q8TDW5 730 aaPredicted RBP12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 ARL8AQ96BM9 186 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 M0R2N6 131 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 MYBL1P10243 752 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 MDH1P40925 334 aaKnown RBP12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 STAT5BP51692 787 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 YWHAGP61981 247 aaKnown RBP eCLIP12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 ARHGEF18Q6ZSZ5 1173 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 USP50Q70EL3 339 aaPredicted RBP12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 ZNF354CQ86Y25 554 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 RBM41Q96IZ5 413 aaKnown RBP12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 HEXIM2Q96MH2 286 aaKnown RBP12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 ERP44Q9BS26 406 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 GPBP1L1Q9HC44 474 aaPredicted RBP12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 TTC7AQ9ULT0 858 aaPredicted RBP12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 MAFGO15525 162 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 SGPL1O95470 568 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 SPATA31C1P0DKV0 1188 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 KCNJ1P48048 391 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 BASP1P80723 227 aaKnown RBP12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 KRT17Q04695 432 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 DPP9Q86TI2 863 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 NLRP7Q8WX94 980 aa12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 ZKSCAN4Q969J2 545 aaPredicted RBP12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 ELAC2Q9BQ52 826 aaKnown RBP12.01□□□□□ -0.49
PCDHGB4-201ENST00000519479 RARRES1P49788 294 aa12□□□□□ -0.49
PCDHGB4-201ENST00000519479 SNRPFP62306 86 aaKnown RBP12□□□□□ -0.49
PCDHGB4-201ENST00000519479 EMC2Q15006 297 aa12□□□□□ -0.49
PCDHGB4-201ENST00000519479 OR6B2Q6IFH4 312 aa12□□□□□ -0.49
PCDHGB4-201ENST00000519479 ZNF662Q6ZS27 426 aa12□□□□□ -0.49
PCDHGB4-201ENST00000519479 LRRC8CQ8TDW0 803 aa12□□□□□ -0.49
PCDHGB4-201ENST00000519479 SLC20A1Q8WUM9 679 aa12□□□□□ -0.49
PCDHGB4-201ENST00000519479 RNF34Q969K3 372 aa12□□□□□ -0.49
PCDHGB4-201ENST00000519479 MRPL4Q9BYD3 311 aaKnown RBP12□□□□□ -0.49
PCDHGB4-201ENST00000519479 SAYSD1Q9NPB0 183 aa12□□□□□ -0.49
PCDHGB4-201ENST00000519479 DDX3XO00571 662 aaKnown RBP eCLIP12□□□□□ -0.49
PCDHGB4-201ENST00000519479 MCF2LO15068 1137 aa12□□□□□ -0.49
PCDHGB4-201ENST00000519479 CALB1P05937 261 aa12□□□□□ -0.49
PCDHGB4-201ENST00000519479 NPTX2P47972 431 aa12□□□□□ -0.49
PCDHGB4-201ENST00000519479 ARSHQ5FYA8 562 aa12□□□□□ -0.49
PCDHGB4-201ENST00000519479 LRIG3Q6UXM1 1119 aa12□□□□□ -0.49
PCDHGB4-201ENST00000519479 TRIM72Q6ZMU5 477 aa12□□□□□ -0.49
PCDHGB4-201ENST00000519479 C1orf186Q6ZWK4 172 aa12□□□□□ -0.49
PCDHGB4-201ENST00000519479 ACTRT1Q8TDG2 376 aa12□□□□□ -0.49
PCDHGB4-201ENST00000519479 KCTD10Q9H3F6 313 aa12□□□□□ -0.49
PCDHGB4-201ENST00000519479 MYH2Q9UKX2 1941 aa12□□□□□ -0.49
PCDHGB4-201ENST00000519479 FRMPD4Q14CM0 1322 aa12□□□□□ -0.49
PCDHGB4-201ENST00000519479 IGSF9BQ9UPX0 1349 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms