RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 TTC1Q99614 292 aa9.04□□□□□ -0.96
PCM1-212ENST00000519253 CYP26A1O43174 497 aa9.04□□□□□ -0.96
PCM1-212ENST00000519253 KRT38O76015 456 aa9.04□□□□□ -0.96
PCM1-212ENST00000519253 GNAT1P11488 350 aa9.04□□□□□ -0.96
PCM1-212ENST00000519253 TARSP26639 723 aaKnown RBP9.04□□□□□ -0.96
PCM1-212ENST00000519253 PTPN4P29074 926 aa9.04□□□□□ -0.96
PCM1-212ENST00000519253 SKIV2L2P42285 1042 aaKnown RBP9.04□□□□□ -0.96
PCM1-212ENST00000519253 CNGA2Q16280 664 aa9.04□□□□□ -0.96
PCM1-212ENST00000519253 CASC4Q6P4E1 433 aa9.04□□□□□ -0.96
PCM1-212ENST00000519253 STK32AQ8WU08 396 aa9.04□□□□□ -0.96
PCM1-212ENST00000519253 INPP5DQ92835 1189 aa9.04□□□□□ -0.96
PCM1-212ENST00000519253 NSL1Q96IY1 281 aa9.04□□□□□ -0.96
PCM1-212ENST00000519253 MTMR9Q96QG7 549 aa9.04□□□□□ -0.96
PCM1-212ENST00000519253 KMT5AQ9NQR1 393 aa9.04□□□□□ -0.96
PCM1-212ENST00000519253 IRAK4Q9NWZ3 460 aa9.04□□□□□ -0.96
PCM1-212ENST00000519253 NEU2Q9Y3R4 380 aa9.04□□□□□ -0.96
PCM1-212ENST00000519253 MYCLP12524 364 aaPredicted RBP9.04□□□□□ -0.96
PCM1-212ENST00000519253 DBN1Q16643 649 aa9.04□□□□□ -0.96
PCM1-212ENST00000519253 ATP8B4Q8TF62 1192 aa9.04□□□□□ -0.96
PCM1-212ENST00000519253 SLC35C1Q96A29 364 aa9.04□□□□□ -0.96
PCM1-212ENST00000519253 GANQ9H2C0 597 aa9.04□□□□□ -0.96
PCM1-212ENST00000519253 RNPEPL1Q9HAU8 725 aa9.04□□□□□ -0.96
PCM1-212ENST00000519253 CD209Q9NNX6 404 aa9.04□□□□□ -0.96
PCM1-212ENST00000519253 LRCH1Q9Y2L9 728 aa9.04□□□□□ -0.96
PCM1-212ENST00000519253 KIAA0391O15091 583 aaKnown RBP9.03□□□□□ -0.96
PCM1-212ENST00000519253 AKR1B1P15121 316 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 RPL21P46778 160 aaKnown RBP9.03□□□□□ -0.96
PCM1-212ENST00000519253 TRADDQ15628 312 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 GRAMD1BQ3KR37 738 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 MFN1Q8IWA4 741 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 FBXL13Q8NEE6 735 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 DEPTORQ8TB45 409 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 RNF25Q96BH1 459 aaPredicted RBP9.03□□□□□ -0.96
PCM1-212ENST00000519253 HES6Q96HZ4 224 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 TSSK1BQ9BXA7 367 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 NUF2Q9BZD4 464 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 JMJD4Q9H9V9 463 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 NPHS2Q9NP85 383 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 HAO1Q9UJM8 370 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 RPL26L1Q9UNX3 145 aaKnown RBP9.03□□□□□ -0.96
PCM1-212ENST00000519253 ZHX2Q9Y6X8 837 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 H7C0C1 242 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 LPXNO60711 386 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 ATP5OP48047 213 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 BZW1Q7L1Q6 419 aaKnown RBP9.03□□□□□ -0.96
PCM1-212ENST00000519253 NLRP9Q7RTR0 991 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 RFX6Q8HWS3 928 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 C4orf33Q8N1A6 199 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 RASGEF1CQ8N431 466 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 AFAP1L2Q8N4X5 818 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 TAB3Q8N5C8 712 aaPredicted RBP9.03□□□□□ -0.96
PCM1-212ENST00000519253 RIOX1Q9H6W3 641 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 GOLGA8IPA6NC78 632 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 GOLGA8JA6NMD2 632 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 AHCYL1O43865 530 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 EPHA7Q15375 998 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 HIF1AQ16665 826 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 EMC10Q5UCC4 262 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 IRGCQ6NXR0 463 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 CATSPER3Q86XQ3 398 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 CKAP2Q8WWK9 683 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 NLRP7Q8WX94 980 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 NGLY1Q96IV0 654 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 SERPINI1Q99574 410 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 C11orf70Q9BRQ4 267 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 POLR3CQ9BUI4 534 aaPredicted RBP9.03□□□□□ -0.96
PCM1-212ENST00000519253 PI4KBQ9UBF8 816 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 IP6K2Q9UHH9 426 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 CHD2O14647 1828 aaKnown RBP9.03□□□□□ -0.96
PCM1-212ENST00000519253 ABLIM1O14639 778 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 UNC5CO95185 931 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 HOXA13P31271 388 aaPredicted RBP9.03□□□□□ -0.96
PCM1-212ENST00000519253 RANBP1P43487 201 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 MARSP56192 900 aaKnown RBP9.03□□□□□ -0.96
PCM1-212ENST00000519253 AUHQ13825 339 aaKnown RBP9.03□□□□□ -0.96
PCM1-212ENST00000519253 GIT2Q14161 759 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 P3H1Q32P28 736 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 KIAA0825Q8IV33 1275 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 CDAN1Q8IWY9 1227 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 DTX3LQ8TDB6 740 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 ARHGAP10A1A4S6 786 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 FOXN3O00409 490 aaPredicted RBP9.03□□□□□ -0.96
PCM1-212ENST00000519253 TLR2O60603 784 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 SERPINB4P48594 390 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 ARSEP51690 589 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 SP4Q02446 784 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 MED21Q13503 144 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 TMEM179Q6ZVK1 233 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 DPH6Q7L8W6 267 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 IFT122Q9HBG6 1241 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 KIAA1586Q9HCI6 787 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 SALL4Q9UJQ4 1053 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 MAD1L1Q9Y6D9 718 aa9.03□□□□□ -0.96
PCM1-212ENST00000519253 TSPOAP1O95153 1857 aa9.02□□□□□ -0.96
PCM1-212ENST00000519253 SMAPO00193 183 aa9.02□□□□□ -0.96
PCM1-212ENST00000519253 TLR3O15455 904 aaKnown RBP9.02□□□□□ -0.96
PCM1-212ENST00000519253 KCNJ2P63252 427 aa9.02□□□□□ -0.96
PCM1-212ENST00000519253 RINT1Q6NUQ1 792 aa9.02□□□□□ -0.96
PCM1-212ENST00000519253 RBBP8NLQ8NC74 664 aaPredicted RBP9.02□□□□□ -0.96
PCM1-212ENST00000519253 OSBPL8Q9BZF1 889 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms