RNA–Protein interactions for RNA: ENST00000517012.1

RNU6-388P-201, Transcript of RNA, U6 small nuclear 388, pseudogene, humanhuman

BASIC

Gene RNU6-388P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-388P-201ENST00000517012 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.19□□□□□ -1.9
RNU6-388P-201ENST00000517012 KRT37O76014 449 aa3.19□□□□□ -1.9
RNU6-388P-201ENST00000517012 PRPF6O94906 941 aaKnown RBP3.19□□□□□ -1.9
RNU6-388P-201ENST00000517012 ELANEP08246 267 aa3.19□□□□□ -1.9
RNU6-388P-201ENST00000517012 EXOSC10Q01780 885 aaKnown RBP3.19□□□□□ -1.9
RNU6-388P-201ENST00000517012 GRM1Q13255 1194 aa3.19□□□□□ -1.9
RNU6-388P-201ENST00000517012 ANKS6Q68DC2 871 aa3.19□□□□□ -1.9
RNU6-388P-201ENST00000517012 LNX2Q8N448 690 aa3.19□□□□□ -1.9
RNU6-388P-201ENST00000517012 C7orf31Q8N865 590 aa3.19□□□□□ -1.9
RNU6-388P-201ENST00000517012 GSTCDQ8NEC7 633 aa3.19□□□□□ -1.9
RNU6-388P-201ENST00000517012 ADAMTS15Q8TE58 950 aa3.19□□□□□ -1.9
RNU6-388P-201ENST00000517012 DENND1AQ8TEH3 1009 aa3.19□□□□□ -1.9
RNU6-388P-201ENST00000517012 ARMC5Q96C12 935 aa3.19□□□□□ -1.9
RNU6-388P-201ENST00000517012 DHRS4Q9BTZ2 278 aa3.19□□□□□ -1.9
RNU6-388P-201ENST00000517012 KLHL11Q9NVR0 708 aa3.19□□□□□ -1.9
RNU6-388P-201ENST00000517012 WNT6Q9Y6F9 365 aa3.19□□□□□ -1.9
RNU6-388P-201ENST00000517012 AOX1Q06278 1338 aa3.19□□□□□ -1.9
RNU6-388P-201ENST00000517012 DRGXA6NNA5 263 aa3.18□□□□□ -1.9
RNU6-388P-201ENST00000517012 DVL2O14641 736 aa3.18□□□□□ -1.9
RNU6-388P-201ENST00000517012 CHN2P52757 468 aa3.18□□□□□ -1.9
RNU6-388P-201ENST00000517012 LAMB3Q13751 1172 aa3.18□□□□□ -1.9
RNU6-388P-201ENST00000517012 CDYL2Q8N8U2 506 aa3.18□□□□□ -1.9
RNU6-388P-201ENST00000517012 IGSF22Q8N9C0 903 aa3.18□□□□□ -1.9
RNU6-388P-201ENST00000517012 ZBTB8BQ8NAP8 495 aaPredicted RBP3.18□□□□□ -1.9
RNU6-388P-201ENST00000517012 RNF169Q8NCN4 708 aa3.18□□□□□ -1.9
RNU6-388P-201ENST00000517012 RNF31Q96EP0 1072 aa3.18□□□□□ -1.9
RNU6-388P-201ENST00000517012 PTCD3Q96EY7 689 aaKnown RBP3.18□□□□□ -1.9
RNU6-388P-201ENST00000517012 REXO4Q9GZR2 422 aaKnown RBP3.18□□□□□ -1.9
RNU6-388P-201ENST00000517012 SLC52A2Q9HAB3 445 aa3.18□□□□□ -1.9
RNU6-388P-201ENST00000517012 ANLNQ9NQW6 1124 aa3.18□□□□□ -1.9
RNU6-388P-201ENST00000517012 NDOR1Q9UHB4 597 aa3.18□□□□□ -1.9
RNU6-388P-201ENST00000517012 SERINC4A6NH21 518 aa3.17□□□□□ -1.9
RNU6-388P-201ENST00000517012 LINC01548A6NM66 108 aa3.17□□□□□ -1.9
RNU6-388P-201ENST00000517012 KLF4O43474 513 aa3.17□□□□□ -1.9
RNU6-388P-201ENST00000517012 PEX1O43933 1283 aa3.17□□□□□ -1.9
RNU6-388P-201ENST00000517012 APOL3O95236 402 aa3.17□□□□□ -1.9
RNU6-388P-201ENST00000517012 FGRP09769 529 aa3.17□□□□□ -1.9
RNU6-388P-201ENST00000517012 FOLR3P41439 243 aa3.17□□□□□ -1.9
RNU6-388P-201ENST00000517012 MECP2P51608 486 aaKnown RBP3.17□□□□□ -1.9
RNU6-388P-201ENST00000517012 CXADRP78310 365 aa3.17□□□□□ -1.9
RNU6-388P-201ENST00000517012 GNL2Q13823 731 aaKnown RBP3.17□□□□□ -1.9
RNU6-388P-201ENST00000517012 ZNF174Q15697 407 aa3.17□□□□□ -1.9
RNU6-388P-201ENST00000517012 EXOC2Q96KP1 924 aa3.17□□□□□ -1.9
RNU6-388P-201ENST00000517012 MYL10Q9BUA6 226 aa3.17□□□□□ -1.9
RNU6-388P-201ENST00000517012 PODXL2Q9NZ53 605 aa3.17□□□□□ -1.9
RNU6-388P-201ENST00000517012 MRPS23Q9Y3D9 190 aaKnown RBP3.17□□□□□ -1.9
RNU6-388P-201ENST00000517012 PCDHB6Q9Y5E3 794 aa3.17□□□□□ -1.9
RNU6-388P-201ENST00000517012 ZMYM3Q14202 1370 aa3.16□□□□□ -1.9
RNU6-388P-201ENST00000517012 IGKV2D-30A0A075B6S6 120 aa3.16□□□□□ -1.9
RNU6-388P-201ENST00000517012 CCDC187A0A096LP49 1063 aa3.16□□□□□ -1.9
RNU6-388P-201ENST00000517012 PPEF2O14830 753 aa3.16□□□□□ -1.9
RNU6-388P-201ENST00000517012 NRP2O60462 931 aa3.16□□□□□ -1.9
RNU6-388P-201ENST00000517012 SEC24DO94855 1032 aaPredicted RBP3.16□□□□□ -1.9
RNU6-388P-201ENST00000517012 KCNA6P17658 529 aa3.16□□□□□ -1.9
RNU6-388P-201ENST00000517012 LONRF2Q1L5Z9 754 aa3.16□□□□□ -1.9
RNU6-388P-201ENST00000517012 CCDC178Q5BJE1 867 aa3.16□□□□□ -1.9
RNU6-388P-201ENST00000517012 TSHZ3Q63HK5 1081 aa3.16□□□□□ -1.9
RNU6-388P-201ENST00000517012 KIAA0895LQ68EN5 471 aa3.16□□□□□ -1.9
RNU6-388P-201ENST00000517012 UNQ6494/PRO21346Q6UXR6 183 aa3.16□□□□□ -1.9
RNU6-388P-201ENST00000517012 PDZD4Q76G19 769 aaPredicted RBP3.16□□□□□ -1.9
RNU6-388P-201ENST00000517012 NEK8Q86SG6 692 aa3.16□□□□□ -1.9
RNU6-388P-201ENST00000517012 MSL3Q8N5Y2 521 aaKnown RBP3.16□□□□□ -1.9
RNU6-388P-201ENST00000517012 HMCESQ96FZ2 354 aa3.16□□□□□ -1.9
RNU6-388P-201ENST00000517012 RNPEPQ9H4A4 650 aa3.16□□□□□ -1.9
RNU6-388P-201ENST00000517012 KCNE5Q9UJ90 142 aa3.16□□□□□ -1.9
RNU6-388P-201ENST00000517012 MYPNQ86TC9 1320 aa3.16□□□□□ -1.9
RNU6-388P-201ENST00000517012 A0A1B0GTW7 788 aa3.15□□□□□ -1.91
RNU6-388P-201ENST00000517012 A0A1W2PR48 441 aa3.15□□□□□ -1.91
RNU6-388P-201ENST00000517012 TCRBV16S1A1N1A0A5B0 115 aa3.15□□□□□ -1.91
RNU6-388P-201ENST00000517012 H7C1D1 291 aa3.15□□□□□ -1.91
RNU6-388P-201ENST00000517012 PJA2O43164 708 aa3.15□□□□□ -1.91
RNU6-388P-201ENST00000517012 PCDH8O95206 1070 aa3.15□□□□□ -1.91
RNU6-388P-201ENST00000517012 CKBP12277 381 aa3.15□□□□□ -1.91
RNU6-388P-201ENST00000517012 XPAP23025 273 aaPredicted RBP3.15□□□□□ -1.91
RNU6-388P-201ENST00000517012 PTX3P26022 381 aaPredicted RBP3.15□□□□□ -1.91
RNU6-388P-201ENST00000517012 GPR15P49685 360 aa3.15□□□□□ -1.91
RNU6-388P-201ENST00000517012 TRIM61Q5EBN2 209 aa3.15□□□□□ -1.91
RNU6-388P-201ENST00000517012 ATXN7L2Q5T6C5 722 aaPredicted RBP3.15□□□□□ -1.91
RNU6-388P-201ENST00000517012 TSTD2Q5T7W7 516 aa3.15□□□□□ -1.91
RNU6-388P-201ENST00000517012 KIAA1161Q6NSJ0 714 aa3.15□□□□□ -1.91
RNU6-388P-201ENST00000517012 ABHD17CQ6PCB6 329 aa3.15□□□□□ -1.91
RNU6-388P-201ENST00000517012 SPATC1Q76KD6 591 aa3.15□□□□□ -1.91
RNU6-388P-201ENST00000517012 COLGALT2Q8IYK4 626 aa3.15□□□□□ -1.91
RNU6-388P-201ENST00000517012 KIAA1958Q8N8K9 716 aa3.15□□□□□ -1.91
RNU6-388P-201ENST00000517012 FERMT2Q96AC1 680 aa3.15□□□□□ -1.91
RNU6-388P-201ENST00000517012 PPP1R10Q96QC0 940 aaKnown RBP3.15□□□□□ -1.91
RNU6-388P-201ENST00000517012 EBF3Q9H4W6 596 aa3.15□□□□□ -1.91
RNU6-388P-201ENST00000517012 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.15□□□□□ -1.91
RNU6-388P-201ENST00000517012 NOTCH4Q99466 2003 aa3.15□□□□□ -1.91
RNU6-388P-201ENST00000517012 KRT86O43790 486 aa3.14□□□□□ -1.91
RNU6-388P-201ENST00000517012 MT3P25713 68 aa3.14□□□□□ -1.91
RNU6-388P-201ENST00000517012 CERS1P27544 350 aa3.14□□□□□ -1.91
RNU6-388P-201ENST00000517012 GRIA3P42263 894 aa3.14□□□□□ -1.91
RNU6-388P-201ENST00000517012 VAV2P52735 878 aa3.14□□□□□ -1.91
RNU6-388P-201ENST00000517012 NRG3P56975 720 aa3.14□□□□□ -1.91
RNU6-388P-201ENST00000517012 SSRP1Q08945 709 aaKnown RBP3.14□□□□□ -1.91
RNU6-388P-201ENST00000517012 KRT81Q14533 505 aa3.14□□□□□ -1.91
RNU6-388P-201ENST00000517012 ZC3H12BQ5HYM0 836 aaKnown RBP3.14□□□□□ -1.91
RNU6-388P-201ENST00000517012 ATG9BQ674R7 924 aa3.14□□□□□ -1.91
RNU6-388P-201ENST00000517012 KAZNQ674X7 775 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms