RNA–Protein interactions for RNA: ENST00000515585.1

ABCC3-216, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3

Gene ABCC3, Length 484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-216ENST00000515585 PTPN11Q06124 597 aaPredicted RBP14.99□□□□□ -0.01
ABCC3-216ENST00000515585 PRPF4BQ13523 1007 aaKnown RBP14.99□□□□□ -0.01
ABCC3-216ENST00000515585 NOLC1Q14978 699 aaKnown RBP eCLIP14.99□□□□□ -0.01
ABCC3-216ENST00000515585 TCERG1LQ5VWI1 586 aa14.99□□□□□ -0.01
ABCC3-216ENST00000515585 E4F1Q66K89 784 aaPredicted RBP14.99□□□□□ -0.01
ABCC3-216ENST00000515585 GDF6Q6KF10 455 aaPredicted RBP14.99□□□□□ -0.01
ABCC3-216ENST00000515585 TAF2Q6P1X5 1199 aa14.99□□□□□ -0.01
ABCC3-216ENST00000515585 PDXDC1Q6P996 788 aa14.99□□□□□ -0.01
ABCC3-216ENST00000515585 TRIM65Q6PJ69 517 aa14.99□□□□□ -0.01
ABCC3-216ENST00000515585 SERINC5Q86VE9 423 aa14.99□□□□□ -0.01
ABCC3-216ENST00000515585 NME8Q8N427 588 aa14.99□□□□□ -0.01
ABCC3-216ENST00000515585 C7orf31Q8N865 590 aa14.99□□□□□ -0.01
ABCC3-216ENST00000515585 SLC43A3Q8NBI5 491 aa14.99□□□□□ -0.01
ABCC3-216ENST00000515585 NEK11Q8NG66 645 aa14.99□□□□□ -0.01
ABCC3-216ENST00000515585 PPP1R13LQ8WUF5 828 aa14.99□□□□□ -0.01
ABCC3-216ENST00000515585 CPLX3Q8WVH0 158 aa14.99□□□□□ -0.01
ABCC3-216ENST00000515585 ZNF668Q96K58 619 aaPredicted RBP14.99□□□□□ -0.01
ABCC3-216ENST00000515585 FAM213AQ9BRX8 229 aa14.99□□□□□ -0.01
ABCC3-216ENST00000515585 CRACR2AQ9BSW2 395 aa14.99□□□□□ -0.01
ABCC3-216ENST00000515585 INO80BQ9C086 356 aaPredicted RBP14.99□□□□□ -0.01
ABCC3-216ENST00000515585 CDT1Q9H211 546 aa14.99□□□□□ -0.01
ABCC3-216ENST00000515585 PDZD7Q9H5P4 517 aa14.99□□□□□ -0.01
ABCC3-216ENST00000515585 MMRN2Q9H8L6 949 aa14.99□□□□□ -0.01
ABCC3-216ENST00000515585 FAM207AQ9NSI2 230 aaPredicted RBP14.99□□□□□ -0.01
ABCC3-216ENST00000515585 MYO6Q9UM54 1294 aa14.99□□□□□ -0.01
ABCC3-216ENST00000515585 LAMA3Q16787 3333 aa14.99□□□□□ -0.01
ABCC3-216ENST00000515585 A0A1B0GUA9 196 aa14.98□□□□□ -0.01
ABCC3-216ENST00000515585 MOXD2PA6NHM9 499 aa14.98□□□□□ -0.01
ABCC3-216ENST00000515585 MCF2P10911 925 aa14.98□□□□□ -0.01
ABCC3-216ENST00000515585 DARSP14868 501 aaKnown RBP14.98□□□□□ -0.01
ABCC3-216ENST00000515585 UCHL3P15374 230 aa14.98□□□□□ -0.01
ABCC3-216ENST00000515585 ARF4P18085 180 aaPredicted RBP14.98□□□□□ -0.01
ABCC3-216ENST00000515585 JAM2P57087 298 aa14.98□□□□□ -0.01
ABCC3-216ENST00000515585 SLC9C1Q4G0N8 1177 aa14.98□□□□□ -0.01
ABCC3-216ENST00000515585 TMTC1Q8IUR5 882 aa14.98□□□□□ -0.01
ABCC3-216ENST00000515585 EHBP1Q8NDI1 1231 aa14.98□□□□□ -0.01
ABCC3-216ENST00000515585 DNAJB3Q8WWF6 145 aa14.98□□□□□ -0.01
ABCC3-216ENST00000515585 ZNF516Q92618 1163 aa14.98□□□□□ -0.01
ABCC3-216ENST00000515585 DPF3Q92784 378 aa14.98□□□□□ -0.01
ABCC3-216ENST00000515585 CDHR5Q9HBB8 845 aa14.98□□□□□ -0.01
ABCC3-216ENST00000515585 TMEM8AQ9HCN3 771 aa14.98□□□□□ -0.01
ABCC3-216ENST00000515585 GCNT4Q9P109 453 aa14.98□□□□□ -0.01
ABCC3-216ENST00000515585 ANKFY1Q9P2R3 1169 aa14.98□□□□□ -0.01
ABCC3-216ENST00000515585 AJAP1Q9UKB5 411 aaPredicted RBP14.98□□□□□ -0.01
ABCC3-216ENST00000515585 PTPRJQ12913 1337 aa14.97□□□□□ -0.01
ABCC3-216ENST00000515585 MEFVO15553 781 aaPredicted RBP14.97□□□□□ -0.01
ABCC3-216ENST00000515585 C4BPAP04003 597 aaKnown RBP14.97□□□□□ -0.01
ABCC3-216ENST00000515585 RPLP2P05387 115 aaKnown RBP14.97□□□□□ -0.01
ABCC3-216ENST00000515585 ACTN1P12814 892 aa14.97□□□□□ -0.01
ABCC3-216ENST00000515585 HOXA11P31270 313 aaPredicted RBP14.97□□□□□ -0.01
ABCC3-216ENST00000515585 ACOT2P49753 483 aa14.97□□□□□ -0.01
ABCC3-216ENST00000515585 MXI1P50539 228 aa14.97□□□□□ -0.01
ABCC3-216ENST00000515585 ACLYP53396 1101 aa14.97□□□□□ -0.01
ABCC3-216ENST00000515585 APBA1Q02410 837 aa14.97□□□□□ -0.01
ABCC3-216ENST00000515585 MGAT3Q09327 533 aa14.97□□□□□ -0.01
ABCC3-216ENST00000515585 KIZQ2M2Z5 673 aa14.97□□□□□ -0.01
ABCC3-216ENST00000515585 ZACNQ401N2 412 aa14.97□□□□□ -0.01
ABCC3-216ENST00000515585 KRT39Q6A163 491 aa14.97□□□□□ -0.01
ABCC3-216ENST00000515585 RAD9BQ6WBX8 426 aa14.97□□□□□ -0.01
ABCC3-216ENST00000515585 USP37Q86T82 979 aa14.97□□□□□ -0.01
ABCC3-216ENST00000515585 RNF180Q86T96 592 aa14.97□□□□□ -0.01
ABCC3-216ENST00000515585 NLRP7Q8WX94 980 aa14.97□□□□□ -0.01
ABCC3-216ENST00000515585 WNT8BQ93098 351 aa14.97□□□□□ -0.01
ABCC3-216ENST00000515585 GCOM2Q9BZD3 368 aaPredicted RBP14.97□□□□□ -0.01
ABCC3-216ENST00000515585 INTS2Q9H0H0 1204 aaKnown RBP14.97□□□□□ -0.01
ABCC3-216ENST00000515585 FAM49AQ9H0Q0 323 aaPredicted RBP14.97□□□□□ -0.01
ABCC3-216ENST00000515585 PRO3102Q9H379 93 aa14.97□□□□□ -0.01
ABCC3-216ENST00000515585 HMX1Q9NP08 348 aaPredicted RBP14.97□□□□□ -0.01
ABCC3-216ENST00000515585 RRAGDQ9NQL2 400 aaPredicted RBP14.97□□□□□ -0.01
ABCC3-216ENST00000515585 PAK6Q9NQU5 681 aaPredicted RBP14.97□□□□□ -0.01
ABCC3-216ENST00000515585 AIPL1Q9NZN9 384 aa14.97□□□□□ -0.01
ABCC3-216ENST00000515585 FHOD1Q9Y613 1164 aa14.97□□□□□ -0.01
ABCC3-216ENST00000515585 MYCP01106 439 aaPredicted RBP14.96□□□□□ -0.01
ABCC3-216ENST00000515585 RFX1P22670 979 aa14.96□□□□□ -0.01
ABCC3-216ENST00000515585 EIF4BP23588 611 aaKnown RBP14.96□□□□□ -0.01
ABCC3-216ENST00000515585 MSNP26038 577 aaKnown RBP14.96□□□□□ -0.01
ABCC3-216ENST00000515585 TNFSF9P41273 254 aa14.96□□□□□ -0.01
ABCC3-216ENST00000515585 GCLMP48507 274 aa14.96□□□□□ -0.01
ABCC3-216ENST00000515585 CRYBB1P53674 252 aaPredicted RBP14.96□□□□□ -0.01
ABCC3-216ENST00000515585 POLR2FP61218 127 aaKnown RBP14.96□□□□□ -0.01
ABCC3-216ENST00000515585 SNX17Q15036 470 aa14.96□□□□□ -0.01
ABCC3-216ENST00000515585 TRIM71Q2Q1W2 868 aaKnown RBP14.96□□□□□ -0.01
ABCC3-216ENST00000515585 HGSNATQ68CP4 663 aa14.96□□□□□ -0.01
ABCC3-216ENST00000515585 TMEM40Q8WWA1 233 aa14.96□□□□□ -0.01
ABCC3-216ENST00000515585 CGRRF1Q99675 332 aa14.96□□□□□ -0.01
ABCC3-216ENST00000515585 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.96□□□□□ -0.014e-12■■■■□ 26.2
ABCC3-216ENST00000515585 NUCKS1Q9H1E3 243 aaKnown RBP14.96□□□□□ -0.01
ABCC3-216ENST00000515585 TOPORSQ9NS56 1045 aaPredicted RBP14.96□□□□□ -0.01
ABCC3-216ENST00000515585 RBAKQ9NYW8 714 aaPredicted RBP14.96□□□□□ -0.01
ABCC3-216ENST00000515585 PHF24Q9UPV7 400 aa14.96□□□□□ -0.01
ABCC3-216ENST00000515585 SOWAHDA6NJG2 315 aa14.95□□□□□ -0.02
ABCC3-216ENST00000515585 LRRC53A6NM62 1247 aa14.95□□□□□ -0.02
ABCC3-216ENST00000515585 NRDCO43847 1150 aa14.95□□□□□ -0.02
ABCC3-216ENST00000515585 B4GALT4O60513 344 aa14.95□□□□□ -0.02
ABCC3-216ENST00000515585 CSDE1O75534 798 aaKnown RBP14.95□□□□□ -0.02
ABCC3-216ENST00000515585 AXLP30530 894 aa14.95□□□□□ -0.02
ABCC3-216ENST00000515585 ENOX2Q16206 610 aaKnown RBP14.95□□□□□ -0.02
ABCC3-216ENST00000515585 ASTE1Q2TB18 679 aaPredicted RBP14.95□□□□□ -0.02
ABCC3-216ENST00000515585 ZNF568Q3ZCX4 644 aa14.95□□□□□ -0.02
ABCC3-216ENST00000515585 IQCEQ6IPM2 695 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms