RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 GSTCDQ8NEC7 633 aa7.73□□□□□ -1.17
LIMCH1-207ENST00000508466 GSDMBQ8TAX9 411 aa7.73□□□□□ -1.17
LIMCH1-207ENST00000508466 WDR66Q8TBY9 1149 aa7.73□□□□□ -1.17
LIMCH1-207ENST00000508466 GRIN3AQ8TCU5 1115 aa7.73□□□□□ -1.17
LIMCH1-207ENST00000508466 DCUN1D5Q9BTE7 237 aa7.73□□□□□ -1.17
LIMCH1-207ENST00000508466 RNF26Q9BY78 433 aaPredicted RBP7.73□□□□□ -1.17
LIMCH1-207ENST00000508466 OXCT2Q9BYC2 517 aaPredicted RBP7.73□□□□□ -1.17
LIMCH1-207ENST00000508466 NACA2Q9H009 215 aa7.73□□□□□ -1.17
LIMCH1-207ENST00000508466 CYP4F11Q9HBI6 524 aa7.73□□□□□ -1.17
LIMCH1-207ENST00000508466 LUC7LQ9NQ29 371 aaKnown RBP7.73□□□□□ -1.17
LIMCH1-207ENST00000508466 ANLNQ9NQW6 1124 aa7.73□□□□□ -1.17
LIMCH1-207ENST00000508466 MTRF1LQ9UGC7 380 aaKnown RBP7.73□□□□□ -1.17
LIMCH1-207ENST00000508466 TSC22D4Q9Y3Q8 395 aa7.73□□□□□ -1.17
LIMCH1-207ENST00000508466 USP6P35125 1406 aa7.73□□□□□ -1.17
LIMCH1-207ENST00000508466 SSU72P8A0A1W2PR75 194 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 NUDT17P0C025 328 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 ESRRAP11474 423 aaPredicted RBP7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 CYP7A1P22680 504 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 PTPN4P29074 926 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 LONP1P36776 959 aaKnown RBP7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 CASP4P49662 377 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 KCNA1Q09470 495 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 RASGRF1Q13972 1273 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 R3HDM1Q15032 1099 aaKnown RBP7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 SMUG1Q53HV7 270 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 TMEM63BQ5T3F8 832 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 C1orf228Q6PIY5 440 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 CLEC4GQ6UXB4 293 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 LRRC55Q6ZSA7 311 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 SV2BQ7L1I2 683 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 CLNKQ7Z7G1 428 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 SLC26A7Q8TE54 656 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 TMIGD2Q96BF3 282 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 FAM81BQ96LP2 452 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 SENP6Q9GZR1 1112 aaPredicted RBP7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 AAASQ9NRG9 546 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 SELENONQ9NZV5 590 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 FLT1P17948 1338 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 USP17L12C9JPN9 530 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 USP17L21D6R901 530 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 MEIS1O00470 390 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 PRPF3O43395 683 aaKnown RBP7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 MARCH6O60337 910 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 HAUS5O94927 633 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 BAG3O95817 575 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 GSTA2P09210 222 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 UCHL3P15374 230 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 ADRA1DP25100 572 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 ADCY8P40145 1251 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 TROAPQ12815 778 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 CDC16Q13042 620 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 CALCOCO2Q13137 446 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 SPARCL1Q14515 664 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 C16orf72Q14CZ0 275 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 FASTKD3Q14CZ7 662 aaKnown RBP7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 PDK1Q15118 436 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 EML3Q32P44 896 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 GRAMD1BQ3KR37 738 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 HERC4Q5GLZ8 1057 aaPredicted RBP7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 LLGL2Q6P1M3 1020 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 KLHDC10Q6PID8 442 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 GALNT4Q8N4A0 578 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 ENDOVQ8N8Q3 282 aaKnown RBP7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 AZIN2Q96A70 460 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 ECSITQ9BQ95 431 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 C10orf88Q9H8K7 445 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 PDP2Q9P2J9 529 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 VPS51Q9UID3 782 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 TRAF3IP3Q9Y228 551 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 CLEC11AQ9Y240 323 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 AFG3L2Q9Y4W6 797 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 COL4A3BPQ9Y5P4 624 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 ALG6Q9Y672 507 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 MLH3Q9UHC1 1453 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 NWD2Q9ULI1 1742 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 PLEKHG3A1L390 1219 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 TMEM247A6NEH6 219 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 TMEM221A6NGB7 291 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 E9PMD0 336 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 CCDC188H7C350 402 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 XPO1O14980 1071 aaKnown RBP7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 ASMTLO95671 621 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 GSTT2P0CG29 244 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 GSTT2BP0CG30 244 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 ANPEPP15144 967 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 TUFMP49411 452 aaKnown RBP7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 CDK7P50613 346 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 CASP5P51878 434 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 PTENP60484 403 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 NOP14P78316 857 aaKnown RBP7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 IRX4P78413 519 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 AP1B1Q10567 949 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 ATP1A4Q13733 1029 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 CYTH1Q15438 398 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 CARTPTQ16568 116 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 C1orf146Q5VVC0 180 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 CNNM4Q6P4Q7 775 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 RIPOR1Q6ZS17 1223 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 TSHZ1Q6ZSZ6 1077 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 ZNF554Q86TJ5 538 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms