RNA–Protein interactions for RNA: ENST00000504290.5

TP53-208, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-208ENST00000504290 STRN3Q13033 797 aa12.77□□□□□ -0.36
TP53-208ENST00000504290 EDRF1Q3B7T1 1238 aa12.77□□□□□ -0.36
TP53-208ENST00000504290 USP17L1Q7RTZ2 530 aa12.77□□□□□ -0.36
TP53-208ENST00000504290 TRIM74Q86UV6 250 aa12.77□□□□□ -0.36
TP53-208ENST00000504290 TRIM73Q86UV7 250 aa12.77□□□□□ -0.36
TP53-208ENST00000504290 LONP2Q86WA8 852 aa12.77□□□□□ -0.36
TP53-208ENST00000504290 LRRC37BQ96QE4 947 aa12.77□□□□□ -0.36
TP53-208ENST00000504290 MTMR9Q96QG7 549 aa12.77□□□□□ -0.36
TP53-208ENST00000504290 TMEM47Q9BQJ4 181 aa12.77□□□□□ -0.36
TP53-208ENST00000504290 TIPINQ9BVW5 301 aa12.77□□□□□ -0.36
TP53-208ENST00000504290 TBC1D10AQ9BXI6 508 aa12.77□□□□□ -0.36
TP53-208ENST00000504290 PITPNM3Q9BZ71 974 aa12.77□□□□□ -0.36
TP53-208ENST00000504290 OCEL1Q9H607 264 aa12.77□□□□□ -0.36
TP53-208ENST00000504290 PPP1R9AQ9ULJ8 1098 aa12.77□□□□□ -0.36
TP53-208ENST00000504290 STARD13Q9Y3M8 1113 aa12.77□□□□□ -0.36
TP53-208ENST00000504290 USH1CQ9Y6N9 552 aa12.77□□□□□ -0.36
TP53-208ENST00000504290 RPS6KL1Q9Y6S9 549 aa12.77□□□□□ -0.36
TP53-208ENST00000504290 SYNGAP1Q96PV0 1343 aa12.77□□□□□ -0.37
TP53-208ENST00000504290 C10orf71Q711Q0 1435 aa12.77□□□□□ -0.37
TP53-208ENST00000504290 PALM3A6NDB9 673 aaPredicted RBP12.77□□□□□ -0.37
TP53-208ENST00000504290 DDX3XO00571 662 aaKnown RBP eCLIP12.77□□□□□ -0.37
TP53-208ENST00000504290 CETN3O15182 167 aa12.77□□□□□ -0.37
TP53-208ENST00000504290 CREB3O43889 395 aa12.77□□□□□ -0.37
TP53-208ENST00000504290 COQ9O75208 318 aa12.77□□□□□ -0.37
TP53-208ENST00000504290 DCTN3O75935 186 aa12.77□□□□□ -0.37
TP53-208ENST00000504290 GGPS1O95749 300 aa12.77□□□□□ -0.37
TP53-208ENST00000504290 TMEM253P0C7T8 217 aa12.77□□□□□ -0.37
TP53-208ENST00000504290 MYBL1P10243 752 aa12.77□□□□□ -0.37
TP53-208ENST00000504290 SMARCA1P28370 1054 aa12.77□□□□□ -0.37
TP53-208ENST00000504290 GNA11P29992 359 aa12.77□□□□□ -0.37
TP53-208ENST00000504290 DPP8Q6V1X1 898 aaPredicted RBP12.77□□□□□ -0.37
TP53-208ENST00000504290 PPP1R21Q6ZMI0 780 aa12.77□□□□□ -0.37
TP53-208ENST00000504290 ANKRD42Q8N9B4 389 aa12.77□□□□□ -0.37
TP53-208ENST00000504290 SLC44A5Q8NCS7 719 aa12.77□□□□□ -0.37
TP53-208ENST00000504290 SLC35G2Q8TBE7 412 aa12.77□□□□□ -0.37
TP53-208ENST00000504290 RBM46Q8TBY0 533 aaKnown RBP12.77□□□□□ -0.37
TP53-208ENST00000504290 DNAJC19Q96DA6 116 aa12.77□□□□□ -0.37
TP53-208ENST00000504290 PDP2Q9P2J9 529 aa12.77□□□□□ -0.37
TP53-208ENST00000504290 RBM47A0AV96 593 aaKnown RBP12.76□□□□□ -0.37
TP53-208ENST00000504290 MAGEA13PA6NCF6 341 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 SIGLEC16A6NMB1 481 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 RIMBP2O15034 1052 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 HNRNPCL1O60812 293 aaKnown RBP12.76□□□□□ -0.37
TP53-208ENST00000504290 TTLL1O95922 423 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 SETSIPP0DME0 302 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 ACTN1P12814 892 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 BRAFP15056 766 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 VCAM1P19320 739 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 SLC9A1P19634 815 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 NOVP48745 357 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 LONRF1Q17RB8 773 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 EXOC3L4Q17RC7 722 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 UBAP2Q5T6F2 1119 aaKnown RBP12.76□□□□□ -0.37
TP53-208ENST00000504290 KRT79Q5XKE5 535 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 FRMD5Q7Z6J6 570 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 DNAAF5Q86Y56 855 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 LRRC8CQ8TDW0 803 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 U2AF1L4Q8WU68 220 aaKnown RBP12.76□□□□□ -0.37
TP53-208ENST00000504290 C18orf8Q96DM3 657 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 ERP27Q96DN0 273 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 SPZ1Q9BXG8 430 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 VCX3BQ9H321 246 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 TLE6Q9H808 572 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 C6orf50Q9HD87 102 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 VCX3AQ9NNX9 186 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 NMRK1Q9NWW6 199 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 NKIRAS1Q9NYS0 192 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 KIAA1522Q9P206 1035 aaPredicted RBP12.76□□□□□ -0.37
TP53-208ENST00000504290 HDAC9Q9UKV0 1011 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 PFASO15067 1338 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 MYO3BQ8WXR4 1341 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 A0A1B0GVG6 124 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 TCEA3O75764 348 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 ALAS1P13196 640 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 CTNNA2P26232 953 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 PON1P27169 355 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 COPB2P35606 906 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 JAM2P57087 298 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 TMEM119Q4V9L6 283 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 OTUD6AQ7L8S5 288 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 ADAT2Q7Z6V5 191 aaKnown RBP12.76□□□□□ -0.37
TP53-208ENST00000504290 RBM12BQ8IXT5 1001 aaKnown RBP12.76□□□□□ -0.37
TP53-208ENST00000504290 GDAP1Q8TB36 358 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 PTPRN2Q92932 1015 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 SLC7A6OSQ96CW6 309 aaPredicted RBP12.76□□□□□ -0.37
TP53-208ENST00000504290 KCTD10Q9H3F6 313 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 KANSL2Q9H9L4 492 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 OSGEPQ9NPF4 335 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 HAO1Q9UJM8 370 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 STX8Q9UNK0 236 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 ACTL7BQ9Y614 415 aa12.76□□□□□ -0.37
TP53-208ENST00000504290 MAGEB2O15479 319 aa12.75□□□□□ -0.37
TP53-208ENST00000504290 MMP10P09238 476 aa12.75□□□□□ -0.37
TP53-208ENST00000504290 CREB1P16220 341 aa12.75□□□□□ -0.37
TP53-208ENST00000504290 TAC1P20366 129 aa12.75□□□□□ -0.37
TP53-208ENST00000504290 LMNB1P20700 586 aa12.75□□□□□ -0.37
TP53-208ENST00000504290 TARSP26639 723 aaKnown RBP12.75□□□□□ -0.37
TP53-208ENST00000504290 MAGEA8P43361 318 aa12.75□□□□□ -0.37
TP53-208ENST00000504290 IL9RQ01113 521 aa12.75□□□□□ -0.37
TP53-208ENST00000504290 RRP1BQ14684 758 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms