RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 ARID2Q68CP9 1835 aa17.4■□□□□ 0.38
HDAC6-236ENST00000498808 ADAM12O43184 909 aa17.4■□□□□ 0.38
HDAC6-236ENST00000498808 TDGF1P13385 188 aa17.4■□□□□ 0.38
HDAC6-236ENST00000498808 CPA1P15085 419 aa17.4■□□□□ 0.38
HDAC6-236ENST00000498808 AKAP5P24588 427 aa17.4■□□□□ 0.38
HDAC6-236ENST00000498808 RFC5P40937 340 aa17.4■□□□□ 0.38
HDAC6-236ENST00000498808 PTENP60484 403 aa17.4■□□□□ 0.38
HDAC6-236ENST00000498808 AKAP17AQ02040 695 aaKnown RBP17.4■□□□□ 0.38
HDAC6-236ENST00000498808 SPEM2Q0P670 501 aa17.4■□□□□ 0.38
HDAC6-236ENST00000498808 GRIK3Q13003 919 aa17.4■□□□□ 0.38
HDAC6-236ENST00000498808 MTAPQ13126 283 aa17.4■□□□□ 0.38
HDAC6-236ENST00000498808 EMC2Q15006 297 aa17.4■□□□□ 0.38
HDAC6-236ENST00000498808 LPAL2Q16609 132 aa17.4■□□□□ 0.38
HDAC6-236ENST00000498808 LNX1Q8TBB1 728 aaPredicted RBP17.4■□□□□ 0.38
HDAC6-236ENST00000498808 PIK3R5Q8WYR1 880 aa17.4■□□□□ 0.38
HDAC6-236ENST00000498808 NELL2Q99435 816 aa17.4■□□□□ 0.38
HDAC6-236ENST00000498808 RNF26Q9BY78 433 aaPredicted RBP17.4■□□□□ 0.38
HDAC6-236ENST00000498808 FAM126AQ9BYI3 521 aaPredicted RBP17.4■□□□□ 0.38
HDAC6-236ENST00000498808 HCFC1R1Q9NWW0 138 aa17.4■□□□□ 0.38
HDAC6-236ENST00000498808 VAV3Q9UKW4 847 aa17.4■□□□□ 0.38
HDAC6-236ENST00000498808 PPME1Q9Y570 386 aa17.4■□□□□ 0.38
HDAC6-236ENST00000498808 SF3B1O75533 1304 aaKnown RBP eCLIP17.4■□□□□ 0.387e-9■■■■■ 132.1
HDAC6-236ENST00000498808 F5P12259 2224 aa17.4■□□□□ 0.38
HDAC6-236ENST00000498808 VWA8A3KMH1 1905 aa17.39■□□□□ 0.37
HDAC6-236ENST00000498808 SLC30A4O14863 429 aa17.39■□□□□ 0.37
HDAC6-236ENST00000498808 NCAM2O15394 837 aa17.39■□□□□ 0.37
HDAC6-236ENST00000498808 ASAP2O43150 1006 aa17.39■□□□□ 0.37
HDAC6-236ENST00000498808 TADA2AO75478 443 aa17.39■□□□□ 0.37
HDAC6-236ENST00000498808 NLRP5P59047 1200 aa17.39■□□□□ 0.37
HDAC6-236ENST00000498808 PPP2R5CQ13362 524 aa17.39■□□□□ 0.37
HDAC6-236ENST00000498808 HSP90AA2PQ14568 343 aaPredicted RBP17.39■□□□□ 0.37
HDAC6-236ENST00000498808 PCBP1Q15365 356 aaKnown RBP eCLIP17.39■□□□□ 0.37
HDAC6-236ENST00000498808 AMHR2Q16671 573 aa17.39■□□□□ 0.37
HDAC6-236ENST00000498808 POTEHQ6S545 545 aa17.39■□□□□ 0.37
HDAC6-236ENST00000498808 EXOC8Q8IYI6 725 aa17.39■□□□□ 0.37
HDAC6-236ENST00000498808 NETO1Q8TDF5 533 aa17.39■□□□□ 0.37
HDAC6-236ENST00000498808 HASPINQ8TF76 798 aa17.39■□□□□ 0.37
HDAC6-236ENST00000498808 TCP11Q8WWU5 503 aa17.39■□□□□ 0.37
HDAC6-236ENST00000498808 ING5Q8WYH8 240 aa17.39■□□□□ 0.37
HDAC6-236ENST00000498808 SLC26A6Q9BXS9 759 aa17.39■□□□□ 0.37
HDAC6-236ENST00000498808 PLA2G2FQ9BZM2 168 aa17.39■□□□□ 0.37
HDAC6-236ENST00000498808 HEBP1Q9NRV9 189 aa17.39■□□□□ 0.37
HDAC6-236ENST00000498808 INO80B-WBP1J3KQ70 363 aa17.38■□□□□ 0.37
HDAC6-236ENST00000498808 SLC37A4O43826 429 aa17.38■□□□□ 0.37
HDAC6-236ENST00000498808 XYLBO75191 536 aa17.38■□□□□ 0.37
HDAC6-236ENST00000498808 POU2F2P09086 479 aa17.38■□□□□ 0.37
HDAC6-236ENST00000498808 ARF4P18085 180 aaPredicted RBP17.38■□□□□ 0.37
HDAC6-236ENST00000498808 FGD1P98174 961 aa17.38■□□□□ 0.37
HDAC6-236ENST00000498808 ADCY1Q08828 1119 aa17.38■□□□□ 0.37
HDAC6-236ENST00000498808 PSMD5Q16401 504 aa17.38■□□□□ 0.37
HDAC6-236ENST00000498808 MOXD1Q6UVY6 613 aa17.38■□□□□ 0.37
HDAC6-236ENST00000498808 ZNF852Q6ZMS4 543 aa17.38■□□□□ 0.37
HDAC6-236ENST00000498808 Q6ZUG5 572 aa17.38■□□□□ 0.37
HDAC6-236ENST00000498808 CDR2LQ86X02 465 aaPredicted RBP17.38■□□□□ 0.37
HDAC6-236ENST00000498808 IFNLR1Q8IU57 520 aaPredicted RBP17.38■□□□□ 0.37
HDAC6-236ENST00000498808 ZNF687Q8N1G0 1237 aa17.38■□□□□ 0.37
HDAC6-236ENST00000498808 SLC7A14Q8TBB6 771 aa17.38■□□□□ 0.37
HDAC6-236ENST00000498808 BRF1Q92994 677 aa17.38■□□□□ 0.37
HDAC6-236ENST00000498808 CHAMP1Q96JM3 812 aa17.38■□□□□ 0.37
HDAC6-236ENST00000498808 TTPALQ9BTX7 342 aa17.38■□□□□ 0.37
HDAC6-236ENST00000498808 C22orf23Q9BZE7 217 aa17.38■□□□□ 0.37
HDAC6-236ENST00000498808 TRIM6Q9C030 488 aaPredicted RBP17.38■□□□□ 0.37
HDAC6-236ENST00000498808 XPNPEP1Q9NQW7 623 aa17.38■□□□□ 0.37
HDAC6-236ENST00000498808 KLK14Q9P0G3 267 aa17.38■□□□□ 0.37
HDAC6-236ENST00000498808 DNMT3BQ9UBC3 853 aaKnown RBP17.38■□□□□ 0.37
HDAC6-236ENST00000498808 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.37■□□□□ 0.37
HDAC6-236ENST00000498808 M0R2N6 131 aa17.37■□□□□ 0.37
HDAC6-236ENST00000498808 ZBTB39O15060 712 aa17.37■□□□□ 0.37
HDAC6-236ENST00000498808 DKC1O60832 514 aaKnown RBP eCLIP17.37■□□□□ 0.373e-10■■■■■ 48.8
HDAC6-236ENST00000498808 ECI2O75521 394 aa17.37■□□□□ 0.37
HDAC6-236ENST00000498808 KIF4AO95239 1232 aa17.37■□□□□ 0.37
HDAC6-236ENST00000498808 P4HBP07237 508 aaKnown RBP17.37■□□□□ 0.37
HDAC6-236ENST00000498808 YWHABP31946 246 aaKnown RBP17.37■□□□□ 0.37
HDAC6-236ENST00000498808 MBTD1Q05BQ5 628 aa17.37■□□□□ 0.37
HDAC6-236ENST00000498808 KRT32Q14532 448 aa17.37■□□□□ 0.37
HDAC6-236ENST00000498808 PABPC1LQ4VXU2 614 aaKnown RBP17.37■□□□□ 0.37
HDAC6-236ENST00000498808 FAM171A1Q5VUB5 890 aa17.37■□□□□ 0.37
HDAC6-236ENST00000498808 LAIR1Q6GTX8 287 aa17.37■□□□□ 0.37
HDAC6-236ENST00000498808 CEP57Q86XR8 500 aa17.37■□□□□ 0.37
HDAC6-236ENST00000498808 HACE1Q8IYU2 909 aa17.37■□□□□ 0.37
HDAC6-236ENST00000498808 LXNQ9BS40 222 aa17.37■□□□□ 0.37
HDAC6-236ENST00000498808 CHRDQ9H2X0 955 aa17.37■□□□□ 0.37
HDAC6-236ENST00000498808 SH3GLB2Q9NR46 395 aa17.37■□□□□ 0.37
HDAC6-236ENST00000498808 DDX25Q9UHL0 483 aaKnown RBP17.37■□□□□ 0.37
HDAC6-236ENST00000498808 KCNH3Q9ULD8 1083 aa17.37■□□□□ 0.37
HDAC6-236ENST00000498808 PCDHA4Q9UN74 947 aa17.37■□□□□ 0.37
HDAC6-236ENST00000498808 ZMYM2Q9UBW7 1377 aa17.37■□□□□ 0.37
HDAC6-236ENST00000498808 CNOT1A5YKK6 2376 aaKnown RBP17.37■□□□□ 0.37
HDAC6-236ENST00000498808 B4GALT5O43286 388 aa17.36■□□□□ 0.37
HDAC6-236ENST00000498808 NPTXRO95502 500 aa17.36■□□□□ 0.37
HDAC6-236ENST00000498808 HMGB1P09429 215 aaKnown RBP17.36■□□□□ 0.37
HDAC6-236ENST00000498808 IFNAR1P17181 557 aa17.36■□□□□ 0.37
HDAC6-236ENST00000498808 NPY5RQ15761 445 aa17.36■□□□□ 0.37
HDAC6-236ENST00000498808 AXDND1Q5T1B0 1012 aaPredicted RBP17.36■□□□□ 0.37
HDAC6-236ENST00000498808 C4orf19Q8IY42 314 aa17.36■□□□□ 0.37
HDAC6-236ENST00000498808 MTRQ99707 1265 aa17.36■□□□□ 0.37
HDAC6-236ENST00000498808 KCNMB3Q9NPA1 279 aa17.36■□□□□ 0.37
HDAC6-236ENST00000498808 RAB23Q9ULC3 237 aa17.36■□□□□ 0.37
HDAC6-236ENST00000498808 MRPS17Q9Y2R5 130 aaKnown RBP17.36■□□□□ 0.37
HDAC6-236ENST00000498808 COL4A2P08572 1712 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms