RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 GPC5P78333 572 aa15.81■□□□□ 0.12
VARS-228ENST00000495010 SNW1Q13573 536 aaKnown RBP15.81■□□□□ 0.12
VARS-228ENST00000495010 CAPSQ13938 189 aa15.81■□□□□ 0.12
VARS-228ENST00000495010 TMEM132AQ24JP5 1023 aa15.81■□□□□ 0.12
VARS-228ENST00000495010 GVINP1Q7Z2Y8 2422 aa15.81■□□□□ 0.12
VARS-228ENST00000495010 CDR2LQ86X02 465 aaPredicted RBP15.81■□□□□ 0.12
VARS-228ENST00000495010 ASAP3Q8TDY4 903 aa15.81■□□□□ 0.12
VARS-228ENST00000495010 TTPALQ9BTX7 342 aa15.81■□□□□ 0.12
VARS-228ENST00000495010 SPATA6Q9NWH7 488 aaPredicted RBP15.81■□□□□ 0.12
VARS-228ENST00000495010 ZMYM2Q9UBW7 1377 aa15.8■□□□□ 0.12
VARS-228ENST00000495010 KANSL1LA0AUZ9 987 aa15.8■□□□□ 0.12
VARS-228ENST00000495010 MED19A0JLT2 244 aaPredicted RBP15.8■□□□□ 0.12
VARS-228ENST00000495010 B4GALT5O43286 388 aa15.8■□□□□ 0.12
VARS-228ENST00000495010 LAMTOR5O43504 91 aa15.8■□□□□ 0.12
VARS-228ENST00000495010 SLITRK3O94933 977 aa15.8■□□□□ 0.12
VARS-228ENST00000495010 TUSC3Q13454 348 aa15.8■□□□□ 0.12
VARS-228ENST00000495010 UBXN2BQ14CS0 331 aa15.8■□□□□ 0.12
VARS-228ENST00000495010 PSMD5Q16401 504 aa15.8■□□□□ 0.12
VARS-228ENST00000495010 AMHR2Q16671 573 aa15.8■□□□□ 0.12
VARS-228ENST00000495010 RTP2Q5QGT7 225 aa15.8■□□□□ 0.12
VARS-228ENST00000495010 FAM171A1Q5VUB5 890 aa15.8■□□□□ 0.12
VARS-228ENST00000495010 PDXDC1Q6P996 788 aa15.8■□□□□ 0.12
VARS-228ENST00000495010 PARM1Q6UWI2 310 aa15.8■□□□□ 0.12
VARS-228ENST00000495010 GSTCDQ8NEC7 633 aa15.8■□□□□ 0.12
VARS-228ENST00000495010 HASPINQ8TF76 798 aa15.8■□□□□ 0.12
VARS-228ENST00000495010 FGF14Q92915 247 aa15.8■□□□□ 0.12
VARS-228ENST00000495010 BORCS6Q96GS4 357 aa15.8■□□□□ 0.12
VARS-228ENST00000495010 EIF2AK1Q9BQI3 630 aaKnown RBP15.8■□□□□ 0.12
VARS-228ENST00000495010 NFKBIZQ9BYH8 718 aa15.8■□□□□ 0.12
VARS-228ENST00000495010 ANKEF1Q9NU02 776 aa15.8■□□□□ 0.12
VARS-228ENST00000495010 NCDNQ9UBB6 729 aa15.8■□□□□ 0.12
VARS-228ENST00000495010 FBXW11Q9UKB1 542 aa15.8■□□□□ 0.12
VARS-228ENST00000495010 DMDP11532 3685 aa15.79■□□□□ 0.12
VARS-228ENST00000495010 DOCK8Q8NF50 2099 aa15.79■□□□□ 0.12
VARS-228ENST00000495010 A0A1B0GUA9 196 aa15.79■□□□□ 0.12
VARS-228ENST00000495010 CASTOR2A6NHX0 329 aa15.79■□□□□ 0.12
VARS-228ENST00000495010 LRRIQ4A6NIV6 560 aa15.79■□□□□ 0.12
VARS-228ENST00000495010 CCL16O15467 120 aa15.79■□□□□ 0.12
VARS-228ENST00000495010 C8AP07357 584 aa15.79■□□□□ 0.12
VARS-228ENST00000495010 GLRA2P23416 452 aa15.79■□□□□ 0.12
VARS-228ENST00000495010 ARL2P36404 184 aa15.79■□□□□ 0.12
VARS-228ENST00000495010 PFKPQ01813 784 aa15.79■□□□□ 0.12
VARS-228ENST00000495010 PRKCQQ04759 706 aa15.79■□□□□ 0.12
VARS-228ENST00000495010 ELAVL2Q12926 359 aaKnown RBP15.79■□□□□ 0.12
VARS-228ENST00000495010 MLF2Q15773 248 aaPredicted RBP15.79■□□□□ 0.12
VARS-228ENST00000495010 SLC44A4Q53GD3 710 aa15.79■□□□□ 0.12
VARS-228ENST00000495010 POTEGQ6S5H5 508 aa15.79■□□□□ 0.12
VARS-228ENST00000495010 DCLK2Q8N568 766 aa15.79■□□□□ 0.12
VARS-228ENST00000495010 RPP25Q9BUL9 199 aaKnown RBP15.79■□□□□ 0.12
VARS-228ENST00000495010 POLR3FQ9H1D9 316 aaPredicted RBP15.79■□□□□ 0.12
VARS-228ENST00000495010 BRMS1Q9HCU9 246 aa15.79■□□□□ 0.12
VARS-228ENST00000495010 PDRG1Q9NUG6 133 aa15.79■□□□□ 0.12
VARS-228ENST00000495010 PCDHA12Q9UN75 941 aa15.79■□□□□ 0.12
VARS-228ENST00000495010 ARID2Q68CP9 1835 aa15.78■□□□□ 0.12
VARS-228ENST00000495010 POTEMA6NI47 508 aa15.78■□□□□ 0.12
VARS-228ENST00000495010 LRRN2O75325 713 aa15.78■□□□□ 0.12
VARS-228ENST00000495010 LYPLA2O95372 231 aa15.78■□□□□ 0.12
VARS-228ENST00000495010 THP07101 528 aa15.78■□□□□ 0.12
VARS-228ENST00000495010 GLULP15104 373 aa15.78■□□□□ 0.12
VARS-228ENST00000495010 HOXA9P31269 272 aa15.78■□□□□ 0.12
VARS-228ENST00000495010 NTHL1P78549 312 aa15.78■□□□□ 0.12
VARS-228ENST00000495010 CSTF1Q05048 431 aaKnown RBP15.78■□□□□ 0.12
VARS-228ENST00000495010 SPIRE1Q08AE8 756 aa15.78■□□□□ 0.12
VARS-228ENST00000495010 ZNF528Q3MIS6 628 aa15.78■□□□□ 0.12
VARS-228ENST00000495010 MAEAQ7L5Y9 396 aa15.78■□□□□ 0.12
VARS-228ENST00000495010 ZBTB8OSQ8IWT0 167 aa15.78■□□□□ 0.12
VARS-228ENST00000495010 OXER1Q8TDS5 423 aa15.78■□□□□ 0.12
VARS-228ENST00000495010 ATRIPQ8WXE1 791 aa15.78■□□□□ 0.12
VARS-228ENST00000495010 PIK3R5Q8WYR1 880 aa15.78■□□□□ 0.12
VARS-228ENST00000495010 WASF1Q92558 559 aa15.78■□□□□ 0.12
VARS-228ENST00000495010 FGF13Q92913 245 aa15.78■□□□□ 0.12
VARS-228ENST00000495010 SECISBP2LQ93073 1101 aaKnown RBP15.78■□□□□ 0.12
VARS-228ENST00000495010 CLSTN3Q9BQT9 956 aa15.78■□□□□ 0.12
VARS-228ENST00000495010 PAAF1Q9BRP4 392 aa15.78■□□□□ 0.12
VARS-228ENST00000495010 PRMT7Q9NVM4 692 aaPredicted RBP15.78■□□□□ 0.12
VARS-228ENST00000495010 CACNG4Q9UBN1 327 aa15.78■□□□□ 0.12
VARS-228ENST00000495010 FBXO4Q9UKT5 387 aa15.78■□□□□ 0.12
VARS-228ENST00000495010 FAM170BA6NMN3 283 aa15.77■□□□□ 0.12
VARS-228ENST00000495010 SPTLC1O15269 473 aa15.77■□□□□ 0.12
VARS-228ENST00000495010 USO1O60763 962 aaKnown RBP15.77■□□□□ 0.12
VARS-228ENST00000495010 KIF4AO95239 1232 aa15.77■□□□□ 0.12
VARS-228ENST00000495010 KRT2P35908 639 aa15.77■□□□□ 0.12
VARS-228ENST00000495010 MAGEA9P43362 315 aa15.77■□□□□ 0.12
VARS-228ENST00000495010 RARRES1P49788 294 aa15.77■□□□□ 0.12
VARS-228ENST00000495010 CALCRLQ16602 461 aa15.77■□□□□ 0.12
VARS-228ENST00000495010 RSPO4Q2I0M5 234 aaPredicted RBP15.77■□□□□ 0.12
VARS-228ENST00000495010 LNX1Q8TBB1 728 aaPredicted RBP15.77■□□□□ 0.12
VARS-228ENST00000495010 SLC7A14Q8TBB6 771 aa15.77■□□□□ 0.12
VARS-228ENST00000495010 PRIMPOLQ96LW4 560 aa15.77■□□□□ 0.12
VARS-228ENST00000495010 HSD17B14Q9BPX1 270 aa15.77■□□□□ 0.12
VARS-228ENST00000495010 OSBPL6Q9BZF3 934 aa15.77■□□□□ 0.12
VARS-228ENST00000495010 TM6SF1Q9BZW5 370 aa15.77■□□□□ 0.12
VARS-228ENST00000495010 EP300Q09472 2414 aaPredicted RBP15.77■□□□□ 0.11
VARS-228ENST00000495010 STK36Q9NRP7 1315 aa15.76■□□□□ 0.11
VARS-228ENST00000495010 N4BP3O15049 544 aa15.76■□□□□ 0.11
VARS-228ENST00000495010 NCAM2O15394 837 aa15.76■□□□□ 0.11
VARS-228ENST00000495010 EPB41L2O43491 1005 aaKnown RBP15.76■□□□□ 0.11
VARS-228ENST00000495010 SDHBP21912 280 aa15.76■□□□□ 0.11
VARS-228ENST00000495010 SCRN1Q12765 414 aa15.76■□□□□ 0.11
VARS-228ENST00000495010 UVSSAQ2YD98 709 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms