RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 CUL4BQ13620 913 aa12.11□□□□□ -0.47
CPSF7-212ENST00000489728 ZC2HC1CQ53FD0 456 aaPredicted RBP12.11□□□□□ -0.47
CPSF7-212ENST00000489728 XKR4Q5GH76 650 aa12.11□□□□□ -0.47
CPSF7-212ENST00000489728 PDE12Q6L8Q7 609 aaKnown RBP12.11□□□□□ -0.47
CPSF7-212ENST00000489728 KCNT2Q6UVM3 1135 aa12.11□□□□□ -0.47
CPSF7-212ENST00000489728 EPM2AIP1Q7L775 607 aaPredicted RBP12.11□□□□□ -0.47
CPSF7-212ENST00000489728 MYLIPQ8WY64 445 aa12.11□□□□□ -0.47
CPSF7-212ENST00000489728 MRPL38Q96DV4 380 aaKnown RBP12.11□□□□□ -0.47
CPSF7-212ENST00000489728 ACAP3Q96P50 834 aa12.11□□□□□ -0.47
CPSF7-212ENST00000489728 GAD1Q99259 594 aa12.11□□□□□ -0.47
CPSF7-212ENST00000489728 APOL6Q9BWW8 343 aa12.11□□□□□ -0.47
CPSF7-212ENST00000489728 GTPBP4Q9BZE4 634 aaKnown RBP12.11□□□□□ -0.47
CPSF7-212ENST00000489728 RNF39Q9H2S5 420 aa12.11□□□□□ -0.47
CPSF7-212ENST00000489728 CERS4Q9HA82 394 aa12.11□□□□□ -0.47
CPSF7-212ENST00000489728 PLEKHA5Q9HAU0 1116 aa12.11□□□□□ -0.47
CPSF7-212ENST00000489728 EXOC1Q9NV70 894 aa12.11□□□□□ -0.47
CPSF7-212ENST00000489728 SNTG2Q9NY99 539 aa12.11□□□□□ -0.47
CPSF7-212ENST00000489728 SPG21Q9NZD8 308 aa12.11□□□□□ -0.47
CPSF7-212ENST00000489728 ANKFY1Q9P2R3 1169 aa12.11□□□□□ -0.47
CPSF7-212ENST00000489728 PARP2Q9UGN5 583 aa12.11□□□□□ -0.47
CPSF7-212ENST00000489728 MTUS1Q9ULD2 1270 aa12.11□□□□□ -0.47
CPSF7-212ENST00000489728 PLAGL2Q9UPG8 496 aa12.11□□□□□ -0.47
CPSF7-212ENST00000489728 USP20Q9Y2K6 914 aa12.11□□□□□ -0.47
CPSF7-212ENST00000489728 TDRD15B5MCY1 1934 aaKnown RBP12.11□□□□□ -0.47
CPSF7-212ENST00000489728 KLRC4O43908 158 aa12.1□□□□□ -0.47
CPSF7-212ENST00000489728 FAM189A1O60320 539 aa12.1□□□□□ -0.47
CPSF7-212ENST00000489728 NR1I2O75469 434 aa12.1□□□□□ -0.47
CPSF7-212ENST00000489728 FGF18O76093 207 aa12.1□□□□□ -0.47
CPSF7-212ENST00000489728 MYBP10242 640 aa12.1□□□□□ -0.47
CPSF7-212ENST00000489728 KCNE1P15382 129 aa12.1□□□□□ -0.47
CPSF7-212ENST00000489728 GARTP22102 1010 aa12.1□□□□□ -0.47
CPSF7-212ENST00000489728 AKAP5P24588 427 aa12.1□□□□□ -0.47
CPSF7-212ENST00000489728 CASP5P51878 434 aa12.1□□□□□ -0.47
CPSF7-212ENST00000489728 BCAR1P56945 870 aa12.1□□□□□ -0.47
CPSF7-212ENST00000489728 KRT17Q04695 432 aa12.1□□□□□ -0.47
CPSF7-212ENST00000489728 DPYDQ12882 1025 aa12.1□□□□□ -0.47
CPSF7-212ENST00000489728 ADGRE1Q14246 886 aa12.1□□□□□ -0.47
CPSF7-212ENST00000489728 KCNB1Q14721 858 aa12.1□□□□□ -0.47
CPSF7-212ENST00000489728 BMT2Q1RMZ1 405 aa12.1□□□□□ -0.47
CPSF7-212ENST00000489728 TIGD5Q53EQ6 642 aa12.1□□□□□ -0.47
CPSF7-212ENST00000489728 SLC39A4Q6P5W5 647 aa12.1□□□□□ -0.47
CPSF7-212ENST00000489728 ALKAL1Q6UXT8 129 aa12.1□□□□□ -0.47
CPSF7-212ENST00000489728 SPRED2Q7Z698 418 aa12.1□□□□□ -0.47
CPSF7-212ENST00000489728 THNSL1Q8IYQ7 743 aa12.1□□□□□ -0.47
CPSF7-212ENST00000489728 SLC39A11Q8N1S5 342 aa12.1□□□□□ -0.47
CPSF7-212ENST00000489728 KLHL23Q8NBE8 558 aa12.1□□□□□ -0.47
CPSF7-212ENST00000489728 GSTCDQ8NEC7 633 aa12.1□□□□□ -0.47
CPSF7-212ENST00000489728 ZNF507Q8TCN5 953 aa12.1□□□□□ -0.47
CPSF7-212ENST00000489728 GDPD5Q8WTR4 605 aa12.1□□□□□ -0.47
CPSF7-212ENST00000489728 SNX27Q96L92 541 aa12.1□□□□□ -0.47
CPSF7-212ENST00000489728 ZFP42Q96MM3 310 aa12.1□□□□□ -0.47
CPSF7-212ENST00000489728 FAM193BQ96PV7 902 aaPredicted RBP12.1□□□□□ -0.47
CPSF7-212ENST00000489728 BLZF1Q9H2G9 400 aa12.1□□□□□ -0.47
CPSF7-212ENST00000489728 NRDE2Q9H7Z3 1164 aa12.1□□□□□ -0.47
CPSF7-212ENST00000489728 SLC38A7Q9NVC3 462 aa12.1□□□□□ -0.47
CPSF7-212ENST00000489728 TBC1D7Q9P0N9 293 aa12.1□□□□□ -0.47
CPSF7-212ENST00000489728 CNTN3Q9P232 1028 aa12.1□□□□□ -0.47
CPSF7-212ENST00000489728 CGNQ9P2M7 1197 aaKnown RBP12.1□□□□□ -0.47
CPSF7-212ENST00000489728 PUF60Q9UHX1 559 aaKnown RBP12.1□□□□□ -0.47
CPSF7-212ENST00000489728 FSD2A1L4K1 749 aa12.09□□□□□ -0.47
CPSF7-212ENST00000489728 KINO60870 393 aaKnown RBP12.09□□□□□ -0.47
CPSF7-212ENST00000489728 ZC3H11AO75152 810 aaKnown RBP eCLIP12.09□□□□□ -0.47
CPSF7-212ENST00000489728 RHOBTB3O94955 611 aa12.09□□□□□ -0.47
CPSF7-212ENST00000489728 KIF20AO95235 890 aa12.09□□□□□ -0.47
CPSF7-212ENST00000489728 SLC34A2O95436 690 aa12.09□□□□□ -0.47
CPSF7-212ENST00000489728 LDHAP00338 332 aaKnown RBP12.09□□□□□ -0.47
CPSF7-212ENST00000489728 RPN1P04843 607 aaKnown RBP12.09□□□□□ -0.47
CPSF7-212ENST00000489728 ALDH2P05091 517 aa12.09□□□□□ -0.47
CPSF7-212ENST00000489728 ITGB1P05556 798 aa12.09□□□□□ -0.47
CPSF7-212ENST00000489728 THP07101 528 aa12.09□□□□□ -0.47
CPSF7-212ENST00000489728 ADRB2P07550 413 aa12.09□□□□□ -0.47
CPSF7-212ENST00000489728 GALTP07902 379 aa12.09□□□□□ -0.47
CPSF7-212ENST00000489728 MATR3P43243 847 aaKnown RBP eCLIP12.09□□□□□ -0.47
CPSF7-212ENST00000489728 SCNN1GP51170 649 aa12.09□□□□□ -0.47
CPSF7-212ENST00000489728 TUSC3Q13454 348 aa12.09□□□□□ -0.47
CPSF7-212ENST00000489728 ZBTB33Q86T24 672 aa12.09□□□□□ -0.47
CPSF7-212ENST00000489728 CD302Q8IX05 232 aa12.09□□□□□ -0.47
CPSF7-212ENST00000489728 COLGALT2Q8IYK4 626 aa12.09□□□□□ -0.47
CPSF7-212ENST00000489728 GRAMD1CQ8IYS0 662 aa12.09□□□□□ -0.47
CPSF7-212ENST00000489728 SYCP3Q8IZU3 236 aa12.09□□□□□ -0.47
CPSF7-212ENST00000489728 GOLGA5Q8TBA6 731 aa12.09□□□□□ -0.47
CPSF7-212ENST00000489728 TMEM174Q8WUU8 243 aa12.09□□□□□ -0.47
CPSF7-212ENST00000489728 TMEM169Q96HH4 297 aa12.09□□□□□ -0.47
CPSF7-212ENST00000489728 UROC1Q96N76 676 aa12.09□□□□□ -0.47
CPSF7-212ENST00000489728 GBP4Q96PP9 640 aa12.09□□□□□ -0.47
CPSF7-212ENST00000489728 MSTO1Q9BUK6 570 aa12.09□□□□□ -0.47
CPSF7-212ENST00000489728 RMND1Q9NWS8 449 aa12.09□□□□□ -0.47
CPSF7-212ENST00000489728 GDAQ9Y2T3 454 aa12.09□□□□□ -0.47
CPSF7-212ENST00000489728 MTCH2Q9Y6C9 303 aa12.09□□□□□ -0.47
CPSF7-212ENST00000489728 CITO14578 2027 aa12.09□□□□□ -0.47
CPSF7-212ENST00000489728 PTGESO14684 152 aa12.08□□□□□ -0.48
CPSF7-212ENST00000489728 DDHD2O94830 711 aa12.08□□□□□ -0.48
CPSF7-212ENST00000489728 POMCP01189 267 aa12.08□□□□□ -0.48
CPSF7-212ENST00000489728 SLC11A1P49279 550 aa12.08□□□□□ -0.48
CPSF7-212ENST00000489728 AFF1P51825 1210 aaKnown RBP12.08□□□□□ -0.48
CPSF7-212ENST00000489728 NAB2Q15742 525 aa12.08□□□□□ -0.48
CPSF7-212ENST00000489728 KMT5BQ4FZB7 885 aa12.08□□□□□ -0.48
CPSF7-212ENST00000489728 ZNF280BQ86YH2 543 aa12.08□□□□□ -0.48
CPSF7-212ENST00000489728 CEP120Q8N960 986 aa12.08□□□□□ -0.48
CPSF7-212ENST00000489728 SPATA20Q8TB22 786 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms