RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 GIT1Q9Y2X7 761 aa12.43□□□□□ -0.42
NUP50-216ENST00000486184 A0A0B4J269 797 aa12.42□□□□□ -0.42
NUP50-216ENST00000486184 GRXCR1A8MXD5 290 aa12.42□□□□□ -0.42
NUP50-216ENST00000486184 TISP43B9A030 160 aa12.42□□□□□ -0.42
NUP50-216ENST00000486184 PDXKO00764 312 aa12.42□□□□□ -0.42
NUP50-216ENST00000486184 DGKIO75912 1065 aa12.42□□□□□ -0.42
NUP50-216ENST00000486184 ATF7P17544 494 aaPredicted RBP12.42□□□□□ -0.42
NUP50-216ENST00000486184 AKAP5P24588 427 aa12.42□□□□□ -0.42
NUP50-216ENST00000486184 PRCPP42785 496 aa12.42□□□□□ -0.42
NUP50-216ENST00000486184 RABGGTBP53611 331 aa12.42□□□□□ -0.42
NUP50-216ENST00000486184 RNASELQ05823 741 aaKnown RBP12.42□□□□□ -0.42
NUP50-216ENST00000486184 BTG3Q14201 252 aaPredicted RBP12.42□□□□□ -0.42
NUP50-216ENST00000486184 NFKBIBQ15653 356 aa12.42□□□□□ -0.42
NUP50-216ENST00000486184 PAN2Q504Q3 1202 aaKnown RBP12.42□□□□□ -0.42
NUP50-216ENST00000486184 COBLL1Q53SF7 1204 aa12.42□□□□□ -0.42
NUP50-216ENST00000486184 SPOUT1Q5T280 376 aaKnown RBP12.42□□□□□ -0.42
NUP50-216ENST00000486184 SLC39A4Q6P5W5 647 aa12.42□□□□□ -0.42
NUP50-216ENST00000486184 FAM193BQ96PV7 902 aaPredicted RBP12.42□□□□□ -0.42
NUP50-216ENST00000486184 TMEM117Q9H0C3 514 aa12.42□□□□□ -0.42
NUP50-216ENST00000486184 IKZF4Q9H2S9 585 aa12.42□□□□□ -0.42
NUP50-216ENST00000486184 PCIF1Q9H4Z3 704 aa12.42□□□□□ -0.42
NUP50-216ENST00000486184 AGPAT3Q9NRZ7 376 aa12.42□□□□□ -0.42
NUP50-216ENST00000486184 PCDHA11Q9Y5I1 949 aa12.42□□□□□ -0.42
NUP50-216ENST00000486184 STYXL1Q9Y6J8 313 aa12.42□□□□□ -0.42
NUP50-216ENST00000486184 ABLIM1O14639 778 aa12.41□□□□□ -0.42
NUP50-216ENST00000486184 CLIC2O15247 247 aa12.41□□□□□ -0.42
NUP50-216ENST00000486184 RECQL4O94761 1208 aa12.41□□□□□ -0.42
NUP50-216ENST00000486184 LETM1O95202 739 aaPredicted RBP12.41□□□□□ -0.42
NUP50-216ENST00000486184 CLTAP09496 248 aa12.41□□□□□ -0.42
NUP50-216ENST00000486184 RPL13P26373 211 aaKnown RBP12.41□□□□□ -0.42
NUP50-216ENST00000486184 HOXD13P35453 343 aa12.41□□□□□ -0.42
NUP50-216ENST00000486184 MLH1P40692 756 aa12.41□□□□□ -0.42
NUP50-216ENST00000486184 CYP2J2P51589 502 aa12.41□□□□□ -0.42
NUP50-216ENST00000486184 PPP2R3AQ06190 1150 aa12.41□□□□□ -0.42
NUP50-216ENST00000486184 SEZ6Q53EL9 994 aa12.41□□□□□ -0.42
NUP50-216ENST00000486184 NOMO2Q5JPE7 1267 aa12.41□□□□□ -0.42
NUP50-216ENST00000486184 KLHL10Q6JEL2 608 aa12.41□□□□□ -0.42
NUP50-216ENST00000486184 AGMOQ6ZNB7 445 aa12.41□□□□□ -0.42
NUP50-216ENST00000486184 CMTR2Q8IYT2 770 aaKnown RBP12.41□□□□□ -0.42
NUP50-216ENST00000486184 ADSSL1Q8N142 457 aa12.41□□□□□ -0.42
NUP50-216ENST00000486184 LRRC43Q8N309 656 aa12.41□□□□□ -0.42
NUP50-216ENST00000486184 GPD1LQ8N335 351 aa12.41□□□□□ -0.42
NUP50-216ENST00000486184 FIBCD1Q8N539 461 aa12.41□□□□□ -0.42
NUP50-216ENST00000486184 CEP120Q8N960 986 aa12.41□□□□□ -0.42
NUP50-216ENST00000486184 XXYLT1Q8NBI6 393 aa12.41□□□□□ -0.42
NUP50-216ENST00000486184 SAAL1Q96ER3 474 aa12.41□□□□□ -0.42
NUP50-216ENST00000486184 DHTKD1Q96HY7 919 aaPredicted RBP12.41□□□□□ -0.42
NUP50-216ENST00000486184 CBWD1Q9BRT8 395 aa12.41□□□□□ -0.42
NUP50-216ENST00000486184 FAM213AQ9BRX8 229 aa12.41□□□□□ -0.42
NUP50-216ENST00000486184 RPF1Q9H9Y2 349 aaKnown RBP12.41□□□□□ -0.42
NUP50-216ENST00000486184 KIAA1586Q9HCI6 787 aa12.41□□□□□ -0.42
NUP50-216ENST00000486184 HSPBP1Q9NZL4 362 aa12.41□□□□□ -0.42
NUP50-216ENST00000486184 KLK14Q9P0G3 267 aa12.41□□□□□ -0.42
NUP50-216ENST00000486184 TMEM63CQ9P1W3 806 aa12.41□□□□□ -0.42
NUP50-216ENST00000486184 KANSL3Q9P2N6 904 aa12.41□□□□□ -0.42
NUP50-216ENST00000486184 COL4A6Q14031 1691 aa12.41□□□□□ -0.42
NUP50-216ENST00000486184 BICDL2A1A5D9 508 aa12.4□□□□□ -0.42
NUP50-216ENST00000486184 ARL5CA6NH57 179 aa12.4□□□□□ -0.42
NUP50-216ENST00000486184 MEIS3P2A8K0S8 358 aa12.4□□□□□ -0.42
NUP50-216ENST00000486184 TGFB1I1O43294 461 aa12.4□□□□□ -0.42
NUP50-216ENST00000486184 EXTL3O43909 919 aa12.4□□□□□ -0.42
NUP50-216ENST00000486184 EXOC3O60645 756 aa12.4□□□□□ -0.42
NUP50-216ENST00000486184 OFD1O75665 1012 aa12.4□□□□□ -0.42
NUP50-216ENST00000486184 NR3C1P04150 777 aa12.4□□□□□ -0.42
NUP50-216ENST00000486184 ADSSP30520 456 aa12.4□□□□□ -0.42
NUP50-216ENST00000486184 ACOT2P49753 483 aa12.4□□□□□ -0.42
NUP50-216ENST00000486184 GATMP50440 423 aa12.4□□□□□ -0.42
NUP50-216ENST00000486184 NLRP12P59046 1061 aa12.4□□□□□ -0.42
NUP50-216ENST00000486184 HTRA4P83105 476 aaPredicted RBP12.4□□□□□ -0.42
NUP50-216ENST00000486184 SMAD3P84022 425 aaKnown RBP12.4□□□□□ -0.42
NUP50-216ENST00000486184 LRIT3Q3SXY7 679 aa12.4□□□□□ -0.42
NUP50-216ENST00000486184 CLLU1OSQ5K130 101 aa12.4□□□□□ -0.42
NUP50-216ENST00000486184 FAM109BQ6ICB4 259 aaPredicted RBP12.4□□□□□ -0.42
NUP50-216ENST00000486184 CRIPAKQ8N1N5 446 aa12.4□□□□□ -0.42
NUP50-216ENST00000486184 MLKLQ8NB16 471 aa12.4□□□□□ -0.42
NUP50-216ENST00000486184 P2RX5Q93086 422 aa12.4□□□□□ -0.42
NUP50-216ENST00000486184 GAD1Q99259 594 aa12.4□□□□□ -0.42
NUP50-216ENST00000486184 HAPLN2Q9GZV7 340 aa12.4□□□□□ -0.42
NUP50-216ENST00000486184 KCTD10Q9H3F6 313 aa12.4□□□□□ -0.42
NUP50-216ENST00000486184 SLC28A3Q9HAS3 691 aa12.4□□□□□ -0.42
NUP50-216ENST00000486184 CTNND2Q9UQB3 1225 aa12.4□□□□□ -0.42
NUP50-216ENST00000486184 FRMD4BQ9Y2L6 1034 aa12.4□□□□□ -0.42
NUP50-216ENST00000486184 GOLGA8IPA6NC78 632 aa12.39□□□□□ -0.43
NUP50-216ENST00000486184 ZNF233A6NK53 670 aa12.39□□□□□ -0.43
NUP50-216ENST00000486184 GOLGA8JA6NMD2 632 aa12.39□□□□□ -0.43
NUP50-216ENST00000486184 IL18RAPO95256 599 aa12.39□□□□□ -0.43
NUP50-216ENST00000486184 POMCP01189 267 aa12.39□□□□□ -0.43
NUP50-216ENST00000486184 CA3P07451 260 aa12.39□□□□□ -0.43
NUP50-216ENST00000486184 CXCL8P10145 99 aa12.39□□□□□ -0.43
NUP50-216ENST00000486184 NR2F2P24468 414 aa12.39□□□□□ -0.43
NUP50-216ENST00000486184 CCNE1P24864 410 aa12.39□□□□□ -0.43
NUP50-216ENST00000486184 TNFSF9P41273 254 aa12.39□□□□□ -0.43
NUP50-216ENST00000486184 SCNN1GP51170 649 aa12.39□□□□□ -0.43
NUP50-216ENST00000486184 LRRC63Q05C16 580 aa12.39□□□□□ -0.43
NUP50-216ENST00000486184 GRIK3Q13003 919 aa12.39□□□□□ -0.43
NUP50-216ENST00000486184 PAK1Q13153 545 aa12.39□□□□□ -0.43
NUP50-216ENST00000486184 STX1AQ16623 288 aa12.39□□□□□ -0.43
NUP50-216ENST00000486184 EDRF1Q3B7T1 1238 aa12.39□□□□□ -0.43
NUP50-216ENST00000486184 PPP2R2DQ66LE6 453 aa12.39□□□□□ -0.43
NUP50-216ENST00000486184 RBM43Q6ZSC3 357 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms