RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 LIMD1Q9UGP4 676 aa10.4□□□□□ -0.74
NUP50-215ENST00000484186 SORCS3Q9UPU3 1222 aa10.4□□□□□ -0.74
NUP50-215ENST00000484186 CCDC195A0A1B0GUA6 201 aa10.39□□□□□ -0.75
NUP50-215ENST00000484186 PP2D1A8MPX8 630 aa10.39□□□□□ -0.75
NUP50-215ENST00000484186 K7ERI5 159 aa10.39□□□□□ -0.75
NUP50-215ENST00000484186 PTGESO14684 152 aa10.39□□□□□ -0.75
NUP50-215ENST00000484186 RECQL4O94761 1208 aa10.39□□□□□ -0.75
NUP50-215ENST00000484186 GLUD1P00367 558 aa10.39□□□□□ -0.75
NUP50-215ENST00000484186 EDN1P05305 212 aa10.39□□□□□ -0.75
NUP50-215ENST00000484186 CDC25AP30304 524 aa10.39□□□□□ -0.75
NUP50-215ENST00000484186 TUSC3Q13454 348 aa10.39□□□□□ -0.75
NUP50-215ENST00000484186 MTMR3Q13615 1198 aa10.39□□□□□ -0.75
NUP50-215ENST00000484186 HSP90AA2PQ14568 343 aaPredicted RBP10.39□□□□□ -0.75
NUP50-215ENST00000484186 DCAF4L1Q3SXM0 396 aa10.39□□□□□ -0.75
NUP50-215ENST00000484186 RILPL1Q5EBL4 403 aa10.39□□□□□ -0.75
NUP50-215ENST00000484186 NT5DC1Q5TFE4 455 aa10.39□□□□□ -0.75
NUP50-215ENST00000484186 ATF7IP2Q5U623 682 aa10.39□□□□□ -0.75
NUP50-215ENST00000484186 ELMSAN1Q6PJG2 1045 aa10.39□□□□□ -0.75
NUP50-215ENST00000484186 CYP26C1Q6V0L0 522 aa10.39□□□□□ -0.75
NUP50-215ENST00000484186 CCDC149Q6ZUS6 474 aa10.39□□□□□ -0.75
NUP50-215ENST00000484186 UBALD2Q8IYN6 164 aa10.39□□□□□ -0.75
NUP50-215ENST00000484186 TDRD5Q8NAT2 981 aaKnown RBP10.39□□□□□ -0.75
NUP50-215ENST00000484186 HDAC7Q8WUI4 952 aa10.39□□□□□ -0.75
NUP50-215ENST00000484186 ACSF2Q96CM8 615 aaPredicted RBP10.39□□□□□ -0.75
NUP50-215ENST00000484186 TMX3Q96JJ7 454 aa10.39□□□□□ -0.75
NUP50-215ENST00000484186 B3GALT6Q96L58 329 aa10.39□□□□□ -0.75
NUP50-215ENST00000484186 PAAF1Q9BRP4 392 aa10.39□□□□□ -0.75
NUP50-215ENST00000484186 KIFC3Q9BVG8 833 aa10.39□□□□□ -0.75
NUP50-215ENST00000484186 PLEKHA4Q9H4M7 779 aa10.39□□□□□ -0.75
NUP50-215ENST00000484186 UPF2Q9HAU5 1272 aaKnown RBP10.39□□□□□ -0.75
NUP50-215ENST00000484186 TDRD15B5MCY1 1934 aaKnown RBP10.39□□□□□ -0.75
NUP50-215ENST00000484186 CASTOR2A6NHX0 329 aa10.38□□□□□ -0.75
NUP50-215ENST00000484186 CCDC169A6NNP5 214 aa10.38□□□□□ -0.75
NUP50-215ENST00000484186 H3BQV1 296 aa10.38□□□□□ -0.75
NUP50-215ENST00000484186 TGM5O43548 720 aa10.38□□□□□ -0.75
NUP50-215ENST00000484186 BRD1O95696 1058 aa10.38□□□□□ -0.75
NUP50-215ENST00000484186 ASGR2P07307 311 aa10.38□□□□□ -0.75
NUP50-215ENST00000484186 SPATA31D3P0C874 917 aa10.38□□□□□ -0.75
NUP50-215ENST00000484186 GJB2P29033 226 aa10.38□□□□□ -0.75
NUP50-215ENST00000484186 NPTX2P47972 431 aa10.38□□□□□ -0.75
NUP50-215ENST00000484186 MCM2P49736 904 aa10.38□□□□□ -0.75
NUP50-215ENST00000484186 PEX3P56589 373 aa10.38□□□□□ -0.75
NUP50-215ENST00000484186 NHLH1Q02575 133 aa10.38□□□□□ -0.75
NUP50-215ENST00000484186 CREMQ03060 361 aa10.38□□□□□ -0.75
NUP50-215ENST00000484186 NAB2Q15742 525 aa10.38□□□□□ -0.75
NUP50-215ENST00000484186 IER5LQ5T953 404 aa10.38□□□□□ -0.75
NUP50-215ENST00000484186 RINT1Q6NUQ1 792 aa10.38□□□□□ -0.75
NUP50-215ENST00000484186 LILRA6Q6PI73 481 aa10.38□□□□□ -0.75
NUP50-215ENST00000484186 SPATA31D4Q6ZUB0 917 aa10.38□□□□□ -0.75
NUP50-215ENST00000484186 C1orf186Q6ZWK4 172 aa10.38□□□□□ -0.75
NUP50-215ENST00000484186 OTOP3Q7RTS5 596 aa10.38□□□□□ -0.75
NUP50-215ENST00000484186 APBB1IPQ7Z5R6 666 aaPredicted RBP10.38□□□□□ -0.75
NUP50-215ENST00000484186 PALB2Q86YC2 1186 aa10.38□□□□□ -0.75
NUP50-215ENST00000484186 DAW1Q8N136 415 aa10.38□□□□□ -0.75
NUP50-215ENST00000484186 KCTD17Q8N5Z5 321 aa10.38□□□□□ -0.75
NUP50-215ENST00000484186 RIN2Q8WYP3 895 aaPredicted RBP10.38□□□□□ -0.75
NUP50-215ENST00000484186 MMTAG2Q9BU76 263 aaKnown RBP10.38□□□□□ -0.75
NUP50-215ENST00000484186 RHOBTB2Q9BYZ6 727 aa10.38□□□□□ -0.75
NUP50-215ENST00000484186 CXCL16Q9H2A7 254 aa10.38□□□□□ -0.75
NUP50-215ENST00000484186 TMEM134Q9H6X4 195 aa10.38□□□□□ -0.75
NUP50-215ENST00000484186 CACNG4Q9UBN1 327 aa10.38□□□□□ -0.75
NUP50-215ENST00000484186 TNFSF13BQ9Y275 285 aa10.38□□□□□ -0.75
NUP50-215ENST00000484186 GDAQ9Y2T3 454 aa10.38□□□□□ -0.75
NUP50-215ENST00000484186 SF3B1O75533 1304 aaKnown RBP eCLIP10.37□□□□□ -0.752e-7■■■■■ 41.4
NUP50-215ENST00000484186 HIP1RO75146 1068 aa10.37□□□□□ -0.75
NUP50-215ENST00000484186 CD2BP2O95400 341 aaKnown RBP10.37□□□□□ -0.75
NUP50-215ENST00000484186 MYBP10242 640 aa10.37□□□□□ -0.75
NUP50-215ENST00000484186 RPL17P18621 184 aaKnown RBP10.37□□□□□ -0.75
NUP50-215ENST00000484186 ATP2C1P98194 919 aaPredicted RBP10.37□□□□□ -0.75
NUP50-215ENST00000484186 ELAVL2Q12926 359 aaKnown RBP10.37□□□□□ -0.75
NUP50-215ENST00000484186 DMP1Q13316 513 aaPredicted RBP10.37□□□□□ -0.75
NUP50-215ENST00000484186 RTP2Q5QGT7 225 aa10.37□□□□□ -0.75
NUP50-215ENST00000484186 HYIQ5T013 277 aa10.37□□□□□ -0.75
NUP50-215ENST00000484186 PRSS55Q6UWB4 352 aaPredicted RBP10.37□□□□□ -0.75
NUP50-215ENST00000484186 KCNK18Q7Z418 384 aa10.37□□□□□ -0.75
NUP50-215ENST00000484186 CEP57Q86XR8 500 aa10.37□□□□□ -0.75
NUP50-215ENST00000484186 GLYCTKQ8IVS8 523 aa10.37□□□□□ -0.75
NUP50-215ENST00000484186 HASPINQ8TF76 798 aa10.37□□□□□ -0.75
NUP50-215ENST00000484186 DRC1Q96MC2 740 aa10.37□□□□□ -0.75
NUP50-215ENST00000484186 ACO2Q99798 780 aaKnown RBP10.37□□□□□ -0.75
NUP50-215ENST00000484186 PRRX2Q99811 253 aa10.37□□□□□ -0.75
NUP50-215ENST00000484186 TTPALQ9BTX7 342 aa10.37□□□□□ -0.75
NUP50-215ENST00000484186 RUSC1Q9BVN2 902 aa10.37□□□□□ -0.75
NUP50-215ENST00000484186 TIPINQ9BVW5 301 aa10.37□□□□□ -0.75
NUP50-215ENST00000484186 NT5C3AQ9H0P0 336 aa10.37□□□□□ -0.75
NUP50-215ENST00000484186 C17orf75Q9HAS0 396 aa10.37□□□□□ -0.75
NUP50-215ENST00000484186 WDR6Q9NNW5 1121 aaKnown RBP10.37□□□□□ -0.75
NUP50-215ENST00000484186 KMT5AQ9NQR1 393 aa10.37□□□□□ -0.75
NUP50-215ENST00000484186 SMC3Q9UQE7 1217 aa10.37□□□□□ -0.75
NUP50-215ENST00000484186 RBM19Q9Y4C8 960 aaKnown RBP10.37□□□□□ -0.75
NUP50-215ENST00000484186 MYO10Q9HD67 2058 aa10.37□□□□□ -0.75
NUP50-215ENST00000484186 PHLPP2Q6ZVD8 1323 aa10.36□□□□□ -0.75
NUP50-215ENST00000484186 MUC6Q6W4X9 2439 aa10.36□□□□□ -0.75
NUP50-215ENST00000484186 SFI1A8K8P3 1242 aa10.36□□□□□ -0.75
NUP50-215ENST00000484186 RFPL2O75678 378 aa10.36□□□□□ -0.75
NUP50-215ENST00000484186 KIF4AO95239 1232 aa10.36□□□□□ -0.75
NUP50-215ENST00000484186 PAPLNO95428 1278 aa10.36□□□□□ -0.75
NUP50-215ENST00000484186 PDGFBP01127 241 aaPredicted RBP10.36□□□□□ -0.75
NUP50-215ENST00000484186 AVPR2P30518 371 aa10.36□□□□□ -0.75
NUP50-215ENST00000484186 YARSP54577 528 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms