RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 IFT57Q9NWB7 429 aa5□□□□□ -1.61
CMSS1-204ENST00000479555 COX11Q9Y6N1 276 aa5□□□□□ -1.61
CMSS1-204ENST00000479555 SMARCA2P51531 1590 aa4.99□□□□□ -1.61
CMSS1-204ENST00000479555 EIF4G1Q04637 1599 aaKnown RBP4.99□□□□□ -1.61
CMSS1-204ENST00000479555 ZBED9Q6R2W3 1325 aa4.99□□□□□ -1.61
CMSS1-204ENST00000479555 SALL3Q9BXA9 1300 aa4.99□□□□□ -1.61
CMSS1-204ENST00000479555 VPS8Q8N3P4 1428 aa4.99□□□□□ -1.61
CMSS1-204ENST00000479555 ST20-MTHFSA0A0A6YYL1 179 aa4.99□□□□□ -1.61
CMSS1-204ENST00000479555 A0A1W2PR48 441 aa4.99□□□□□ -1.61
CMSS1-204ENST00000479555 PRSS38A1L453 326 aa4.99□□□□□ -1.61
CMSS1-204ENST00000479555 MAFGO15525 162 aa4.99□□□□□ -1.61
CMSS1-204ENST00000479555 PDE8AO60658 829 aa4.99□□□□□ -1.61
CMSS1-204ENST00000479555 PRAMEF4O60810 478 aa4.99□□□□□ -1.61
CMSS1-204ENST00000479555 SPDEFO95238 335 aa4.99□□□□□ -1.61
CMSS1-204ENST00000479555 HSP90B1P14625 803 aaKnown RBP4.99□□□□□ -1.61
CMSS1-204ENST00000479555 CD40P25942 277 aa4.99□□□□□ -1.61
CMSS1-204ENST00000479555 CD38P28907 300 aa4.99□□□□□ -1.61
CMSS1-204ENST00000479555 CNGA1P29973 690 aa4.99□□□□□ -1.61
CMSS1-204ENST00000479555 CXCR5P32302 372 aa4.99□□□□□ -1.61
CMSS1-204ENST00000479555 WNT3AP56704 352 aa4.99□□□□□ -1.61
CMSS1-204ENST00000479555 GUCY1B3Q02153 619 aa4.99□□□□□ -1.61
CMSS1-204ENST00000479555 PPARAQ07869 468 aa4.99□□□□□ -1.61
CMSS1-204ENST00000479555 UBE3CQ15386 1083 aa4.99□□□□□ -1.61
CMSS1-204ENST00000479555 UTP14CQ5TAP6 766 aaKnown RBP4.99□□□□□ -1.61
CMSS1-204ENST00000479555 KRT26Q7Z3Y9 468 aa4.99□□□□□ -1.61
CMSS1-204ENST00000479555 SLC44A3Q8N4M1 653 aa4.99□□□□□ -1.61
CMSS1-204ENST00000479555 MDM1Q8TC05 714 aa4.99□□□□□ -1.61
CMSS1-204ENST00000479555 IPO4Q8TEX9 1081 aaKnown RBP4.99□□□□□ -1.61
CMSS1-204ENST00000479555 DCLRE1CQ96SD1 692 aaKnown RBP4.99□□□□□ -1.61
CMSS1-204ENST00000479555 BRINP2Q9C0B6 783 aa4.99□□□□□ -1.61
CMSS1-204ENST00000479555 USP36Q9P275 1121 aaKnown RBP4.99□□□□□ -1.61
CMSS1-204ENST00000479555 BCCIPQ9P287 314 aaKnown RBP eCLIP4.99□□□□□ -1.61
CMSS1-204ENST00000479555 TESQ9UGI8 421 aaKnown RBP4.99□□□□□ -1.61
CMSS1-204ENST00000479555 ZKSCAN5Q9Y2L8 839 aa4.99□□□□□ -1.61
CMSS1-204ENST00000479555 USP15Q9Y4E8 981 aaPredicted RBP4.99□□□□□ -1.61
CMSS1-204ENST00000479555 CECR2Q9BXF3 1484 aa4.99□□□□□ -1.61
CMSS1-204ENST00000479555 BAZ1BQ9UIG0 1483 aaKnown RBP4.99□□□□□ -1.61
CMSS1-204ENST00000479555 RSF1Q96T23 1441 aaPredicted RBP4.98□□□□□ -1.61
CMSS1-204ENST00000479555 FAM83GA6ND36 823 aa4.98□□□□□ -1.61
CMSS1-204ENST00000479555 KIF20AO95235 890 aa4.98□□□□□ -1.61
CMSS1-204ENST00000479555 VIL1P09327 827 aaKnown RBP4.98□□□□□ -1.61
CMSS1-204ENST00000479555 CLEC2LP0C7M8 214 aa4.98□□□□□ -1.61
CMSS1-204ENST00000479555 CPEP16870 476 aa4.98□□□□□ -1.61
CMSS1-204ENST00000479555 POU3F2P20265 443 aaPredicted RBP4.98□□□□□ -1.61
CMSS1-204ENST00000479555 DDX6P26196 483 aaKnown RBP eCLIP4.98□□□□□ -1.61
CMSS1-204ENST00000479555 KRTAP10-11P60412 298 aa4.98□□□□□ -1.61
CMSS1-204ENST00000479555 APBA1Q02410 837 aa4.98□□□□□ -1.61
CMSS1-204ENST00000479555 TAP1Q03518 808 aa4.98□□□□□ -1.61
CMSS1-204ENST00000479555 PTPROQ16827 1216 aa4.98□□□□□ -1.61
CMSS1-204ENST00000479555 PRR16Q569H4 304 aa4.98□□□□□ -1.61
CMSS1-204ENST00000479555 ESPNLQ6ZVH7 1005 aa4.98□□□□□ -1.61
CMSS1-204ENST00000479555 PLXDC1Q8IUK5 500 aa4.98□□□□□ -1.61
CMSS1-204ENST00000479555 ZZZ3Q8IYH5 903 aa4.98□□□□□ -1.61
CMSS1-204ENST00000479555 SIMC1Q8NDZ2 872 aa4.98□□□□□ -1.61
CMSS1-204ENST00000479555 CEP95Q96GE4 821 aa4.98□□□□□ -1.61
CMSS1-204ENST00000479555 PHACTR3Q96KR7 559 aa4.98□□□□□ -1.61
CMSS1-204ENST00000479555 ANO3Q9BYT9 981 aa4.98□□□□□ -1.61
CMSS1-204ENST00000479555 POGKQ9P215 609 aa4.98□□□□□ -1.61
CMSS1-204ENST00000479555 EVLQ9UI08 416 aaPredicted RBP4.98□□□□□ -1.61
CMSS1-204ENST00000479555 PPP2R3BQ9Y5P8 575 aa4.98□□□□□ -1.61
CMSS1-204ENST00000479555 NCAPD3P42695 1498 aa4.98□□□□□ -1.61
CMSS1-204ENST00000479555 CC2D2AQ9P2K1 1620 aa4.97□□□□□ -1.61
CMSS1-204ENST00000479555 A0A087X0B3 334 aa4.97□□□□□ -1.61
CMSS1-204ENST00000479555 TMEM127O75204 238 aa4.97□□□□□ -1.61
CMSS1-204ENST00000479555 HKR1P10072 659 aa4.97□□□□□ -1.61
CMSS1-204ENST00000479555 DSG1Q02413 1049 aa4.97□□□□□ -1.61
CMSS1-204ENST00000479555 TRIM25Q14258 630 aaKnown RBP4.97□□□□□ -1.61
CMSS1-204ENST00000479555 SART3Q15020 963 aaKnown RBP4.97□□□□□ -1.61
CMSS1-204ENST00000479555 METRNLQ641Q3 311 aa4.97□□□□□ -1.61
CMSS1-204ENST00000479555 LMBR1LQ6UX01 489 aa4.97□□□□□ -1.61
CMSS1-204ENST00000479555 ABHD15Q6UXT9 468 aa4.97□□□□□ -1.61
CMSS1-204ENST00000479555 KIF18BQ86Y91 864 aa4.97□□□□□ -1.61
CMSS1-204ENST00000479555 THNSL2Q86YJ6 484 aa4.97□□□□□ -1.61
CMSS1-204ENST00000479555 LYSMD2Q8IV50 215 aa4.97□□□□□ -1.61
CMSS1-204ENST00000479555 EFHBQ8N7U6 833 aa4.97□□□□□ -1.61
CMSS1-204ENST00000479555 BOLLQ8N9W6 283 aaKnown RBP4.97□□□□□ -1.61
CMSS1-204ENST00000479555 FAM98AQ8NCA5 519 aaKnown RBP4.97□□□□□ -1.61
CMSS1-204ENST00000479555 TARS2Q9BW92 718 aaKnown RBP4.97□□□□□ -1.61
CMSS1-204ENST00000479555 ALG13Q9NP73 1137 aaKnown RBP4.97□□□□□ -1.61
CMSS1-204ENST00000479555 TMPRSS11EQ9UL52 423 aa4.97□□□□□ -1.61
CMSS1-204ENST00000479555 A0A0U1RQG5 324 aaPredicted RBP4.96□□□□□ -1.62
CMSS1-204ENST00000479555 GAGE12BA1L429 117 aa4.96□□□□□ -1.62
CMSS1-204ENST00000479555 PIPSLA2A3N6 862 aa4.96□□□□□ -1.62
CMSS1-204ENST00000479555 GAGE12HA6NDE8 117 aa4.96□□□□□ -1.62
CMSS1-204ENST00000479555 GSG1L2A8MUP6 293 aa4.96□□□□□ -1.62
CMSS1-204ENST00000479555 ADCY6O43306 1168 aa4.96□□□□□ -1.62
CMSS1-204ENST00000479555 GAS7O60861 476 aa4.96□□□□□ -1.62
CMSS1-204ENST00000479555 F2P00734 622 aa4.96□□□□□ -1.62
CMSS1-204ENST00000479555 HMGB1P09429 215 aaKnown RBP4.96□□□□□ -1.62
CMSS1-204ENST00000479555 ITGAMP11215 1152 aa4.96□□□□□ -1.62
CMSS1-204ENST00000479555 BMPR1AP36894 532 aa4.96□□□□□ -1.62
CMSS1-204ENST00000479555 AVPR1BP47901 424 aa4.96□□□□□ -1.62
CMSS1-204ENST00000479555 ANAPC15P60006 121 aa4.96□□□□□ -1.62
CMSS1-204ENST00000479555 RESTQ13127 1097 aa4.96□□□□□ -1.62
CMSS1-204ENST00000479555 LRRC32Q14392 662 aa4.96□□□□□ -1.62
CMSS1-204ENST00000479555 FAM102AQ5T9C2 384 aaPredicted RBP4.96□□□□□ -1.62
CMSS1-204ENST00000479555 DDX46Q7L014 1031 aaKnown RBP4.96□□□□□ -1.62
CMSS1-204ENST00000479555 TFAP2CQ92754 450 aa4.96□□□□□ -1.62
CMSS1-204ENST00000479555 GPR101Q96P66 508 aaPredicted RBP4.96□□□□□ -1.62
CMSS1-204ENST00000479555 CDC5LQ99459 802 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms