RNA–Protein interactions for RNA: ENST00000474807.5

DNMT3A-210, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-210ENST00000474807 CACNG4Q9UBN1 327 aa20.26■□□□□ 0.83
DNMT3A-210ENST00000474807 ADAM28Q9UKQ2 775 aa20.26■□□□□ 0.83
DNMT3A-210ENST00000474807 SMC3Q9UQE7 1217 aa20.26■□□□□ 0.83
DNMT3A-210ENST00000474807 TMEM221A6NGB7 291 aa20.25■□□□□ 0.83
DNMT3A-210ENST00000474807 K7ERI5 159 aa20.25■□□□□ 0.83
DNMT3A-210ENST00000474807 M0R296 226 aa20.25■□□□□ 0.83
DNMT3A-210ENST00000474807 HIP1RO75146 1068 aa20.25■□□□□ 0.83
DNMT3A-210ENST00000474807 ADH1AP07327 375 aa20.25■□□□□ 0.83
DNMT3A-210ENST00000474807 NPTX2P47972 431 aa20.25■□□□□ 0.83
DNMT3A-210ENST00000474807 PEX3P56589 373 aa20.25■□□□□ 0.83
DNMT3A-210ENST00000474807 MAPK7Q13164 816 aa20.25■□□□□ 0.83
DNMT3A-210ENST00000474807 HSP90AA2PQ14568 343 aaPredicted RBP20.25■□□□□ 0.83
DNMT3A-210ENST00000474807 DCAF4L1Q3SXM0 396 aa20.25■□□□□ 0.83
DNMT3A-210ENST00000474807 ATF7IP2Q5U623 682 aa20.25■□□□□ 0.83
DNMT3A-210ENST00000474807 GPR65Q8IYL9 337 aa20.25■□□□□ 0.83
DNMT3A-210ENST00000474807 B3GALT6Q96L58 329 aa20.25■□□□□ 0.83
DNMT3A-210ENST00000474807 PNMA5Q96PV4 448 aa20.25■□□□□ 0.83
DNMT3A-210ENST00000474807 RUSC1Q9BVN2 902 aa20.25■□□□□ 0.83
DNMT3A-210ENST00000474807 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.25■□□□□ 0.83
DNMT3A-210ENST00000474807 PLXNA3P51805 1871 aa20.24■□□□□ 0.83
DNMT3A-210ENST00000474807 DENND4AQ7Z401 1863 aa20.24■□□□□ 0.83
DNMT3A-210ENST00000474807 THP07101 528 aa20.24■□□□□ 0.83
DNMT3A-210ENST00000474807 SIGLEC14Q08ET2 396 aa20.24■□□□□ 0.83
DNMT3A-210ENST00000474807 USP41Q3LFD5 358 aa20.24■□□□□ 0.83
DNMT3A-210ENST00000474807 C15orf39Q6ZRI6 1047 aa20.24■□□□□ 0.83
DNMT3A-210ENST00000474807 KCTD17Q8N5Z5 321 aa20.24■□□□□ 0.83
DNMT3A-210ENST00000474807 MFSD14AQ96MC6 490 aa20.24■□□□□ 0.83
DNMT3A-210ENST00000474807 TMEM134Q9H6X4 195 aa20.24■□□□□ 0.83
DNMT3A-210ENST00000474807 MAN1C1Q9NR34 630 aa20.24■□□□□ 0.83
DNMT3A-210ENST00000474807 ARHGAP28Q9P2N2 729 aa20.24■□□□□ 0.83
DNMT3A-210ENST00000474807 TNFSF13BQ9Y275 285 aa20.24■□□□□ 0.83
DNMT3A-210ENST00000474807 USTQ9Y2C2 406 aa20.24■□□□□ 0.83
DNMT3A-210ENST00000474807 PHLPP2Q6ZVD8 1323 aa20.24■□□□□ 0.83
DNMT3A-210ENST00000474807 VWA3AA6NCI4 1184 aa20.23■□□□□ 0.83
DNMT3A-210ENST00000474807 CASTOR2A6NHX0 329 aa20.23■□□□□ 0.83
DNMT3A-210ENST00000474807 CCDC169A6NNP5 214 aa20.23■□□□□ 0.83
DNMT3A-210ENST00000474807 TADA2AO75478 443 aa20.23■□□□□ 0.83
DNMT3A-210ENST00000474807 C1RP00736 705 aa20.23■□□□□ 0.83
DNMT3A-210ENST00000474807 LARP1BQ659C4 914 aaKnown RBP20.23■□□□□ 0.83
DNMT3A-210ENST00000474807 ARL6IP4Q66PJ3 421 aaKnown RBP20.23■□□□□ 0.83
DNMT3A-210ENST00000474807 TAS1R3Q7RTX0 852 aa20.23■□□□□ 0.83
DNMT3A-210ENST00000474807 ZDHHC14Q8IZN3 488 aa20.23■□□□□ 0.83
DNMT3A-210ENST00000474807 CMASQ8NFW8 434 aaPredicted RBP20.23■□□□□ 0.83
DNMT3A-210ENST00000474807 ASIC4Q96FT7 647 aa20.23■□□□□ 0.83
DNMT3A-210ENST00000474807 DRC1Q96MC2 740 aa20.23■□□□□ 0.83
DNMT3A-210ENST00000474807 C17orf75Q9HAS0 396 aa20.23■□□□□ 0.83
DNMT3A-210ENST00000474807 PTPRHQ9HD43 1115 aa20.23■□□□□ 0.83
DNMT3A-210ENST00000474807 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.23■□□□□ 0.83
DNMT3A-210ENST00000474807 FNIP2Q9P278 1114 aa20.23■□□□□ 0.83
DNMT3A-210ENST00000474807 GDAQ9Y2T3 454 aa20.23■□□□□ 0.83
DNMT3A-210ENST00000474807 ZNF318Q5VUA4 2279 aa20.22■□□□□ 0.83
DNMT3A-210ENST00000474807 SPDYE4A6NLX3 237 aa20.22■□□□□ 0.83
DNMT3A-210ENST00000474807 KIF4AO95239 1232 aa20.22■□□□□ 0.83
DNMT3A-210ENST00000474807 GLUD1P00367 558 aa20.22■□□□□ 0.83
DNMT3A-210ENST00000474807 GUCY2CP25092 1073 aa20.22■□□□□ 0.83
DNMT3A-210ENST00000474807 DMP1Q13316 513 aaPredicted RBP20.22■□□□□ 0.83
DNMT3A-210ENST00000474807 ZRSR1Q15695 479 aaKnown RBP20.22■□□□□ 0.83
DNMT3A-210ENST00000474807 SYT2Q8N9I0 419 aaPredicted RBP20.22■□□□□ 0.83
DNMT3A-210ENST00000474807 PBXIP1Q96AQ6 731 aa20.22■□□□□ 0.83
DNMT3A-210ENST00000474807 ACO2Q99798 780 aaKnown RBP20.22■□□□□ 0.83
DNMT3A-210ENST00000474807 NTPCRQ9BSD7 190 aaKnown RBP20.22■□□□□ 0.83
DNMT3A-210ENST00000474807 TIPINQ9BVW5 301 aa20.22■□□□□ 0.83
DNMT3A-210ENST00000474807 NT5C3AQ9H0P0 336 aa20.22■□□□□ 0.83
DNMT3A-210ENST00000474807 KMT5AQ9NQR1 393 aa20.22■□□□□ 0.83
DNMT3A-210ENST00000474807 DPP7Q9UHL4 492 aa20.22■□□□□ 0.83
DNMT3A-210ENST00000474807 C2orf16Q68DN1 1984 aa20.22■□□□□ 0.83
DNMT3A-210ENST00000474807 SF3B1O75533 1304 aaKnown RBP eCLIP20.22■□□□□ 0.83
DNMT3A-210ENST00000474807 RTP2Q5QGT7 225 aa20.21■□□□□ 0.83
DNMT3A-210ENST00000474807 PLCD3Q8N3E9 789 aa20.21■□□□□ 0.83
DNMT3A-210ENST00000474807 TDRD5Q8NAT2 981 aaKnown RBP20.21■□□□□ 0.83
DNMT3A-210ENST00000474807 KREMEN2Q8NCW0 462 aa20.21■□□□□ 0.83
DNMT3A-210ENST00000474807 HASPINQ8TF76 798 aa20.21■□□□□ 0.83
DNMT3A-210ENST00000474807 HDAC7Q8WUI4 952 aa20.21■□□□□ 0.83
DNMT3A-210ENST00000474807 RIN2Q8WYP3 895 aaPredicted RBP20.21■□□□□ 0.83
DNMT3A-210ENST00000474807 RHOBTB2Q9BYZ6 727 aa20.21■□□□□ 0.83
DNMT3A-210ENST00000474807 KCNH6Q9H252 994 aa20.21■□□□□ 0.83
DNMT3A-210ENST00000474807 SORCS3Q9UPU3 1222 aa20.21■□□□□ 0.83
DNMT3A-210ENST00000474807 RBM19Q9Y4C8 960 aaKnown RBP20.21■□□□□ 0.83
DNMT3A-210ENST00000474807 CCDC195A0A1B0GUA6 201 aa20.2■□□□□ 0.82
DNMT3A-210ENST00000474807 SFI1A8K8P3 1242 aa20.2■□□□□ 0.82
DNMT3A-210ENST00000474807 TGM5O43548 720 aa20.2■□□□□ 0.82
DNMT3A-210ENST00000474807 PAPLNO95428 1278 aa20.2■□□□□ 0.82
DNMT3A-210ENST00000474807 SLC12A3P55017 1021 aa20.2■□□□□ 0.82
DNMT3A-210ENST00000474807 CUL4AQ13619 759 aa20.2■□□□□ 0.82
DNMT3A-210ENST00000474807 TMEM119Q4V9L6 283 aa20.2■□□□□ 0.82
DNMT3A-210ENST00000474807 LILRA6Q6PI73 481 aa20.2■□□□□ 0.82
DNMT3A-210ENST00000474807 APBB1IPQ7Z5R6 666 aaPredicted RBP20.2■□□□□ 0.82
DNMT3A-210ENST00000474807 ZBTB33Q86T24 672 aa20.2■□□□□ 0.82
DNMT3A-210ENST00000474807 PALB2Q86YC2 1186 aa20.2■□□□□ 0.82
DNMT3A-210ENST00000474807 CEP120Q8N960 986 aa20.2■□□□□ 0.82
DNMT3A-210ENST00000474807 PPP1R10Q96QC0 940 aaKnown RBP20.2■□□□□ 0.82
DNMT3A-210ENST00000474807 PLIN2Q99541 437 aa20.2■□□□□ 0.82
DNMT3A-210ENST00000474807 MRPL4Q9BYD3 311 aaKnown RBP20.2■□□□□ 0.82
DNMT3A-210ENST00000474807 CDT1Q9H211 546 aa20.2■□□□□ 0.82
DNMT3A-210ENST00000474807 MYO10Q9HD67 2058 aa20.2■□□□□ 0.82
DNMT3A-210ENST00000474807 ABLIM1O14639 778 aa20.19■□□□□ 0.82
DNMT3A-210ENST00000474807 SPATA31D3P0C874 917 aa20.19■□□□□ 0.82
DNMT3A-210ENST00000474807 RPL17P18621 184 aaKnown RBP20.19■□□□□ 0.82
DNMT3A-210ENST00000474807 PROZP22891 400 aa20.19■□□□□ 0.82
DNMT3A-210ENST00000474807 GRM5P41594 1212 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms