RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 SF3B1O75533 1304 aaKnown RBP eCLIP21.11■□□□□ 0.97
NCKIPSD-209ENST00000470006 CYP3A7-CYP3A51PA0A087WV96 503 aa21.11■□□□□ 0.97
NCKIPSD-209ENST00000470006 EML1O00423 815 aa21.11■□□□□ 0.97
NCKIPSD-209ENST00000470006 KCNA4P22459 653 aa21.11■□□□□ 0.97
NCKIPSD-209ENST00000470006 CYP3A7P24462 503 aa21.11■□□□□ 0.97
NCKIPSD-209ENST00000470006 EMC2Q15006 297 aa21.11■□□□□ 0.97
NCKIPSD-209ENST00000470006 LPAL2Q16609 132 aa21.11■□□□□ 0.97
NCKIPSD-209ENST00000470006 XKR9Q5GH70 373 aa21.11■□□□□ 0.97
NCKIPSD-209ENST00000470006 RTP2Q5QGT7 225 aa21.11■□□□□ 0.97
NCKIPSD-209ENST00000470006 OTUD6AQ7L8S5 288 aa21.11■□□□□ 0.97
NCKIPSD-209ENST00000470006 ETNPPLQ8TBG4 499 aa21.11■□□□□ 0.97
NCKIPSD-209ENST00000470006 MRPS17Q9Y2R5 130 aaKnown RBP21.11■□□□□ 0.97
NCKIPSD-209ENST00000470006 PPME1Q9Y570 386 aa21.11■□□□□ 0.97
NCKIPSD-209ENST00000470006 LILRB5O75023 590 aa21.1■□□□□ 0.97
NCKIPSD-209ENST00000470006 P4HBP07237 508 aaKnown RBP21.1■□□□□ 0.97
NCKIPSD-209ENST00000470006 ADRB1P08588 477 aa21.1■□□□□ 0.97
NCKIPSD-209ENST00000470006 TARSP26639 723 aaKnown RBP21.1■□□□□ 0.97
NCKIPSD-209ENST00000470006 SPEM2Q0P670 501 aa21.1■□□□□ 0.97
NCKIPSD-209ENST00000470006 GRIK3Q13003 919 aa21.1■□□□□ 0.97
NCKIPSD-209ENST00000470006 HSP90AA2PQ14568 343 aaPredicted RBP21.1■□□□□ 0.97
NCKIPSD-209ENST00000470006 PCBP1Q15365 356 aaKnown RBP eCLIP21.1■□□□□ 0.97
NCKIPSD-209ENST00000470006 PSMD5Q16401 504 aa21.1■□□□□ 0.97
NCKIPSD-209ENST00000470006 TSGA10IPQ3SY00 556 aa21.1■□□□□ 0.97
NCKIPSD-209ENST00000470006 FAM171A1Q5VUB5 890 aa21.1■□□□□ 0.97
NCKIPSD-209ENST00000470006 ZNF852Q6ZMS4 543 aa21.1■□□□□ 0.97
NCKIPSD-209ENST00000470006 ING5Q8WYH8 240 aa21.1■□□□□ 0.97
NCKIPSD-209ENST00000470006 MTRQ99707 1265 aa21.1■□□□□ 0.97
NCKIPSD-209ENST00000470006 TTPALQ9BTX7 342 aa21.1■□□□□ 0.97
NCKIPSD-209ENST00000470006 SH3GLB2Q9NR46 395 aa21.1■□□□□ 0.97
NCKIPSD-209ENST00000470006 CACNG4Q9UBN1 327 aa21.1■□□□□ 0.97
NCKIPSD-209ENST00000470006 PCDHA4Q9UN74 947 aa21.1■□□□□ 0.97
NCKIPSD-209ENST00000470006 MARCH6O60337 910 aa21.09■□□□□ 0.97
NCKIPSD-209ENST00000470006 YWHABP31946 246 aaKnown RBP21.09■□□□□ 0.97
NCKIPSD-209ENST00000470006 PTENP60484 403 aa21.09■□□□□ 0.97
NCKIPSD-209ENST00000470006 TFDP1Q14186 410 aa21.09■□□□□ 0.97
NCKIPSD-209ENST00000470006 PPM1JQ5JR12 505 aa21.09■□□□□ 0.97
NCKIPSD-209ENST00000470006 SLC7A14Q8TBB6 771 aa21.09■□□□□ 0.97
NCKIPSD-209ENST00000470006 CLSTN3Q9BQT9 956 aa21.09■□□□□ 0.97
NCKIPSD-209ENST00000470006 PARD6AQ9NPB6 346 aa21.09■□□□□ 0.97
NCKIPSD-209ENST00000470006 HCFC1R1Q9NWW0 138 aa21.09■□□□□ 0.97
NCKIPSD-209ENST00000470006 NPTXRO95502 500 aa21.08■□□□□ 0.97
NCKIPSD-209ENST00000470006 RPS9P46781 194 aaKnown RBP21.08■□□□□ 0.97
NCKIPSD-209ENST00000470006 MTAPQ13126 283 aa21.08■□□□□ 0.97
NCKIPSD-209ENST00000470006 MXD4Q14582 209 aaPredicted RBP21.08■□□□□ 0.97
NCKIPSD-209ENST00000470006 PABPC1LQ4VXU2 614 aaKnown RBP21.08■□□□□ 0.97
NCKIPSD-209ENST00000470006 PRR23BQ6ZRT6 265 aa21.08■□□□□ 0.97
NCKIPSD-209ENST00000470006 CDR2LQ86X02 465 aaPredicted RBP21.08■□□□□ 0.97
NCKIPSD-209ENST00000470006 BLIDQ8IZY5 108 aa21.08■□□□□ 0.97
NCKIPSD-209ENST00000470006 CLDN23Q96B33 292 aa21.08■□□□□ 0.97
NCKIPSD-209ENST00000470006 FAM126AQ9BYI3 521 aaPredicted RBP21.08■□□□□ 0.97
NCKIPSD-209ENST00000470006 HEBP1Q9NRV9 189 aa21.08■□□□□ 0.97
NCKIPSD-209ENST00000470006 WRAP73Q9P2S5 460 aaPredicted RBP21.08■□□□□ 0.97
NCKIPSD-209ENST00000470006 NDRG2Q9UN36 371 aaKnown RBP21.08■□□□□ 0.97
NCKIPSD-209ENST00000470006 MRPS23Q9Y3D9 190 aaKnown RBP21.08■□□□□ 0.97
NCKIPSD-209ENST00000470006 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.08■□□□□ 0.97
NCKIPSD-209ENST00000470006 CASTOR2A6NHX0 329 aa21.07■□□□□ 0.96
NCKIPSD-209ENST00000470006 ARF4P18085 180 aaPredicted RBP21.07■□□□□ 0.96
NCKIPSD-209ENST00000470006 TGM1P22735 817 aa21.07■□□□□ 0.96
NCKIPSD-209ENST00000470006 NRLP54845 237 aa21.07■□□□□ 0.96
NCKIPSD-209ENST00000470006 CCT2P78371 535 aaKnown RBP21.07■□□□□ 0.96
NCKIPSD-209ENST00000470006 ADCY1Q08828 1119 aa21.07■□□□□ 0.96
NCKIPSD-209ENST00000470006 PPP2R5CQ13362 524 aa21.07■□□□□ 0.96
NCKIPSD-209ENST00000470006 PPP2R5DQ14738 602 aa21.07■□□□□ 0.96
NCKIPSD-209ENST00000470006 NTRK3Q16288 839 aa21.07■□□□□ 0.96
NCKIPSD-209ENST00000470006 AXDND1Q5T1B0 1012 aaPredicted RBP21.07■□□□□ 0.96
NCKIPSD-209ENST00000470006 NPAS3Q8IXF0 933 aa21.07■□□□□ 0.96
NCKIPSD-209ENST00000470006 TRIM22Q8IYM9 498 aa21.07■□□□□ 0.96
NCKIPSD-209ENST00000470006 GSTCDQ8NEC7 633 aa21.07■□□□□ 0.96
NCKIPSD-209ENST00000470006 MCRS1Q96EZ8 462 aa21.07■□□□□ 0.96
NCKIPSD-209ENST00000470006 YTHDC1Q96MU7 727 aaKnown RBP21.07■□□□□ 0.96
NCKIPSD-209ENST00000470006 JAKMIP1Q96N16 626 aaKnown RBP21.07■□□□□ 0.96
NCKIPSD-209ENST00000470006 LXNQ9BS40 222 aa21.07■□□□□ 0.96
NCKIPSD-209ENST00000470006 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.06■□□□□ 0.96
NCKIPSD-209ENST00000470006 SLC37A4O43826 429 aa21.06■□□□□ 0.96
NCKIPSD-209ENST00000470006 IFNAR1P17181 557 aa21.06■□□□□ 0.96
NCKIPSD-209ENST00000470006 HOXA9P31269 272 aa21.06■□□□□ 0.96
NCKIPSD-209ENST00000470006 INF2Q27J81 1249 aa21.06■□□□□ 0.96
NCKIPSD-209ENST00000470006 BLOC1S2Q6QNY1 142 aa21.06■□□□□ 0.96
NCKIPSD-209ENST00000470006 MOXD1Q6UVY6 613 aa21.06■□□□□ 0.96
NCKIPSD-209ENST00000470006 LNX1Q8TBB1 728 aaPredicted RBP21.06■□□□□ 0.96
NCKIPSD-209ENST00000470006 NETO1Q8TDF5 533 aa21.06■□□□□ 0.96
NCKIPSD-209ENST00000470006 PIK3R5Q8WYR1 880 aa21.06■□□□□ 0.96
NCKIPSD-209ENST00000470006 NELL1Q92832 810 aa21.06■□□□□ 0.96
NCKIPSD-209ENST00000470006 PAAF1Q9BRP4 392 aa21.06■□□□□ 0.96
NCKIPSD-209ENST00000470006 NCOA5Q9HCD5 579 aaKnown RBP21.06■□□□□ 0.96
NCKIPSD-209ENST00000470006 PRMT8Q9NR22 394 aaPredicted RBP21.06■□□□□ 0.96
NCKIPSD-209ENST00000470006 DNMT3BQ9UBC3 853 aaKnown RBP21.06■□□□□ 0.96
NCKIPSD-209ENST00000470006 VAV3Q9UKW4 847 aa21.06■□□□□ 0.96
NCKIPSD-209ENST00000470006 ZBTB39O15060 712 aa21.05■□□□□ 0.96
NCKIPSD-209ENST00000470006 MBTD1Q05BQ5 628 aa21.05■□□□□ 0.96
NCKIPSD-209ENST00000470006 SSRP1Q08945 709 aaKnown RBP21.05■□□□□ 0.96
NCKIPSD-209ENST00000470006 TUSC3Q13454 348 aa21.05■□□□□ 0.96
NCKIPSD-209ENST00000470006 NCAPH2Q6IBW4 605 aa21.05■□□□□ 0.96
NCKIPSD-209ENST00000470006 PDXDC1Q6P996 788 aa21.05■□□□□ 0.96
NCKIPSD-209ENST00000470006 SLC27A1Q6PCB7 646 aa21.05■□□□□ 0.96
NCKIPSD-209ENST00000470006 C4orf19Q8IY42 314 aa21.05■□□□□ 0.96
NCKIPSD-209ENST00000470006 FAM20AQ96MK3 541 aa21.05■□□□□ 0.96
NCKIPSD-209ENST00000470006 RGL1Q9NZL6 768 aa21.05■□□□□ 0.96
NCKIPSD-209ENST00000470006 KCNH3Q9ULD8 1083 aa21.05■□□□□ 0.96
NCKIPSD-209ENST00000470006 RALGAPA1Q6GYQ0 2036 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms