RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 THNSL1Q8IYQ7 743 aa12.9□□□□□ -0.34
RNF13-208ENST00000467996 C7orf61Q8IZ16 206 aa12.9□□□□□ -0.34
RNF13-208ENST00000467996 BORCS6Q96GS4 357 aa12.9□□□□□ -0.34
RNF13-208ENST00000467996 TRIM6Q9C030 488 aaPredicted RBP12.9□□□□□ -0.34
RNF13-208ENST00000467996 METTL14Q9HCE5 456 aaKnown RBP12.9□□□□□ -0.34
RNF13-208ENST00000467996 RBAKQ9NYW8 714 aaPredicted RBP12.9□□□□□ -0.34
RNF13-208ENST00000467996 LIMA1Q9UHB6 759 aaKnown RBP12.9□□□□□ -0.34
RNF13-208ENST00000467996 CPSF3Q9UKF6 684 aaKnown RBP12.9□□□□□ -0.34
RNF13-208ENST00000467996 ZNF233A6NK53 670 aa12.89□□□□□ -0.35
RNF13-208ENST00000467996 RAG1P15918 1043 aa12.89□□□□□ -0.35
RNF13-208ENST00000467996 ZSCAN20P17040 1043 aaPredicted RBP12.89□□□□□ -0.35
RNF13-208ENST00000467996 RFC2P35250 354 aa12.89□□□□□ -0.35
RNF13-208ENST00000467996 OSTNP61366 133 aa12.89□□□□□ -0.35
RNF13-208ENST00000467996 CYP24A1Q07973 514 aa12.89□□□□□ -0.35
RNF13-208ENST00000467996 BFSP1Q12934 665 aa12.89□□□□□ -0.35
RNF13-208ENST00000467996 KYAT1Q16773 422 aa12.89□□□□□ -0.35
RNF13-208ENST00000467996 TCTN1Q2MV58 587 aa12.89□□□□□ -0.35
RNF13-208ENST00000467996 INTS8Q75QN2 995 aaKnown RBP12.89□□□□□ -0.35
RNF13-208ENST00000467996 APTXQ7Z2E3 356 aaKnown RBP12.89□□□□□ -0.35
RNF13-208ENST00000467996 BRSK2Q8IWQ3 736 aa12.89□□□□□ -0.35
RNF13-208ENST00000467996 TRIM59Q8IWR1 403 aa12.89□□□□□ -0.35
RNF13-208ENST00000467996 TMEM192Q8IY95 271 aa12.89□□□□□ -0.35
RNF13-208ENST00000467996 ANKRD20A12PQ8NF67 263 aa12.89□□□□□ -0.35
RNF13-208ENST00000467996 LINC01599Q8WXQ3 324 aa12.89□□□□□ -0.35
RNF13-208ENST00000467996 SEPT8Q92599 483 aa12.89□□□□□ -0.35
RNF13-208ENST00000467996 APBB2Q92870 758 aa12.89□□□□□ -0.35
RNF13-208ENST00000467996 ADAM2Q99965 735 aa12.89□□□□□ -0.35
RNF13-208ENST00000467996 TUBGCP2Q9BSJ2 902 aa12.89□□□□□ -0.35
RNF13-208ENST00000467996 HTATIP2Q9BUP3 242 aa12.89□□□□□ -0.35
RNF13-208ENST00000467996 NXF3Q9H4D5 531 aaKnown RBP12.89□□□□□ -0.35
RNF13-208ENST00000467996 FAM105AQ9NUU6 356 aa12.89□□□□□ -0.35
RNF13-208ENST00000467996 TAB2Q9NYJ8 693 aa12.89□□□□□ -0.35
RNF13-208ENST00000467996 PCDH10Q9P2E7 1040 aa12.89□□□□□ -0.35
RNF13-208ENST00000467996 ARMCX3Q9UH62 379 aaPredicted RBP12.89□□□□□ -0.35
RNF13-208ENST00000467996 TDRD15B5MCY1 1934 aaKnown RBP12.89□□□□□ -0.35
RNF13-208ENST00000467996 PTPRSQ13332 1948 aa12.89□□□□□ -0.35
RNF13-208ENST00000467996 AP5Z1O43299 807 aa12.88□□□□□ -0.35
RNF13-208ENST00000467996 SERPINC1P01008 464 aa12.88□□□□□ -0.35
RNF13-208ENST00000467996 CLTAP09496 248 aa12.88□□□□□ -0.35
RNF13-208ENST00000467996 STAG3L1P0CL83 205 aa12.88□□□□□ -0.35
RNF13-208ENST00000467996 CXCL8P10145 99 aa12.88□□□□□ -0.35
RNF13-208ENST00000467996 KRT13P13646 458 aa12.88□□□□□ -0.35
RNF13-208ENST00000467996 COPB1P53618 953 aaKnown RBP12.88□□□□□ -0.35
RNF13-208ENST00000467996 WNT7BP56706 349 aa12.88□□□□□ -0.35
RNF13-208ENST00000467996 FANCCQ00597 558 aa12.88□□□□□ -0.35
RNF13-208ENST00000467996 PLCB2Q00722 1185 aa12.88□□□□□ -0.35
RNF13-208ENST00000467996 PSMD6Q15008 389 aa12.88□□□□□ -0.35
RNF13-208ENST00000467996 ENOX2Q16206 610 aaKnown RBP12.88□□□□□ -0.35
RNF13-208ENST00000467996 MAN2A1Q16706 1144 aa12.88□□□□□ -0.35
RNF13-208ENST00000467996 DCAF17Q5H9S7 520 aaPredicted RBP12.88□□□□□ -0.35
RNF13-208ENST00000467996 MIIPQ5JXC2 388 aa12.88□□□□□ -0.35
RNF13-208ENST00000467996 MFSD5Q6N075 450 aa12.88□□□□□ -0.35
RNF13-208ENST00000467996 SARM1Q6SZW1 724 aa12.88□□□□□ -0.35
RNF13-208ENST00000467996 DEFB128Q7Z7B8 93 aa12.88□□□□□ -0.35
RNF13-208ENST00000467996 SMG8Q8ND04 991 aaKnown RBP12.88□□□□□ -0.35
RNF13-208ENST00000467996 DBF4BQ8NFT6 615 aa12.88□□□□□ -0.35
RNF13-208ENST00000467996 PLEKHO2Q8TD55 490 aa12.88□□□□□ -0.35
RNF13-208ENST00000467996 MFSD14AQ96MC6 490 aa12.88□□□□□ -0.35
RNF13-208ENST00000467996 CCDC94Q9BW85 323 aaPredicted RBP12.88□□□□□ -0.35
RNF13-208ENST00000467996 TRAIPQ9BWF2 469 aa12.88□□□□□ -0.35
RNF13-208ENST00000467996 FTHL17Q9BXU8 183 aa12.88□□□□□ -0.35
RNF13-208ENST00000467996 RGS18Q9NS28 235 aa12.88□□□□□ -0.35
RNF13-208ENST00000467996 SNTG2Q9NY99 539 aa12.88□□□□□ -0.35
RNF13-208ENST00000467996 HES2Q9Y543 173 aa12.88□□□□□ -0.35
RNF13-208ENST00000467996 IPPQ9Y573 584 aa12.88□□□□□ -0.35
RNF13-208ENST00000467996 PCDHB2Q9Y5E7 798 aa12.88□□□□□ -0.35
RNF13-208ENST00000467996 MEFVO15553 781 aaPredicted RBP12.87□□□□□ -0.35
RNF13-208ENST00000467996 TRIM49P0CI25 452 aa12.87□□□□□ -0.35
RNF13-208ENST00000467996 TRIM49CP0CI26 452 aa12.87□□□□□ -0.35
RNF13-208ENST00000467996 PRKCSHP14314 528 aaPredicted RBP12.87□□□□□ -0.35
RNF13-208ENST00000467996 CSF2RAP15509 400 aa12.87□□□□□ -0.35
RNF13-208ENST00000467996 MRE11P49959 708 aa12.87□□□□□ -0.35
RNF13-208ENST00000467996 RAB27AP51159 221 aa12.87□□□□□ -0.35
RNF13-208ENST00000467996 VAMP7P51809 220 aa12.87□□□□□ -0.35
RNF13-208ENST00000467996 DLG4P78352 724 aa12.87□□□□□ -0.35
RNF13-208ENST00000467996 MLLT1Q03111 559 aaPredicted RBP12.87□□□□□ -0.35
RNF13-208ENST00000467996 ENPEPQ07075 957 aa12.87□□□□□ -0.35
RNF13-208ENST00000467996 TCERG1LQ5VWI1 586 aa12.87□□□□□ -0.35
RNF13-208ENST00000467996 CNKSR3Q6P9H4 555 aa12.87□□□□□ -0.35
RNF13-208ENST00000467996 RTN4RL1Q86UN2 441 aaPredicted RBP12.87□□□□□ -0.35
RNF13-208ENST00000467996 TMEM199Q8N511 208 aa12.87□□□□□ -0.35
RNF13-208ENST00000467996 TMC2Q8TDI7 906 aa12.87□□□□□ -0.35
RNF13-208ENST00000467996 SLC35C1Q96A29 364 aa12.87□□□□□ -0.35
RNF13-208ENST00000467996 VWCEQ96DN2 955 aa12.87□□□□□ -0.35
RNF13-208ENST00000467996 ACAP3Q96P50 834 aa12.87□□□□□ -0.35
RNF13-208ENST00000467996 APOL6Q9BWW8 343 aa12.87□□□□□ -0.35
RNF13-208ENST00000467996 VPS16Q9H269 839 aa12.87□□□□□ -0.35
RNF13-208ENST00000467996 RPF1Q9H9Y2 349 aaKnown RBP12.87□□□□□ -0.35
RNF13-208ENST00000467996 PRKAG2Q9UGJ0 569 aa12.87□□□□□ -0.35
RNF13-208ENST00000467996 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.87□□□□□ -0.35
RNF13-208ENST00000467996 MKI67P46013 3256 aaKnown RBP12.86□□□□□ -0.35
RNF13-208ENST00000467996 A0A0U1RQF3 1178 aa12.86□□□□□ -0.35
RNF13-208ENST00000467996 LRRC10BA6NIK2 292 aa12.86□□□□□ -0.35
RNF13-208ENST00000467996 LRRIQ3A6PVS8 624 aaPredicted RBP12.86□□□□□ -0.35
RNF13-208ENST00000467996 C9IYK1 514 aa12.86□□□□□ -0.35
RNF13-208ENST00000467996 EVI5O60447 810 aa12.86□□□□□ -0.35
RNF13-208ENST00000467996 RECQL4O94761 1208 aa12.86□□□□□ -0.35
RNF13-208ENST00000467996 TPM2P07951 284 aa12.86□□□□□ -0.35
RNF13-208ENST00000467996 SKIP12755 728 aa12.86□□□□□ -0.35
RNF13-208ENST00000467996 ATF7P17544 494 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms