RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 NR2E1Q9Y466 385 aa2.5□□□□□ -2.01
NUCKS1-202ENST00000464938 PCDHA13Q9Y5I0 950 aa2.5□□□□□ -2.01
NUCKS1-202ENST00000464938 VSTM5A8MXK1 200 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 NRP1O14786 923 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 SLC16A6O15403 523 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 HOXA3O43365 443 aaPredicted RBP2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 PRC1O43663 620 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 B3GALT2O43825 422 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 CTNND1O60716 968 aaKnown RBP2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 ITGA10O75578 1167 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 TRIM27P14373 513 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 ATF3P18847 181 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 CR2P20023 1033 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 IL12RB1P42701 662 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 MAP2K6P52564 334 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 USP14P54578 494 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 RRADP55042 308 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 RAC3P60763 192 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 NKX6-1P78426 367 aaPredicted RBP2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 TLE1Q04724 770 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 SP140Q13342 867 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 MTM1Q13496 603 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 RIN1Q13671 783 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 RAB39AQ14964 217 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 SURF1Q15526 300 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 CSRP2Q16527 193 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 UAP1L1Q3KQV9 507 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 MFSD14BQ5SR56 506 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 PRAMEF14Q5SWL7 426 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 SLFN13Q68D06 897 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 OTUD7BQ6GQQ9 843 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 PPP4R3AQ6IN85 833 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 CCSAPQ6IQ19 270 aaPredicted RBP2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 BORAQ6PGQ7 559 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 TTC7BQ86TV6 843 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 WDR75Q8IWA0 830 aaKnown RBP2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 PQLC1Q8N2U9 271 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 ZGPATQ8N5A5 531 aaKnown RBP2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 ANKRD53Q8N9V6 530 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 OR14K1Q8NGZ2 314 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 FBXO41Q8TF61 875 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 KAT5Q92993 513 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 RPL10LQ96L21 214 aaKnown RBP2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 SAMD11Q96NU1 681 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 RBM15Q96T37 977 aaKnown RBP eCLIP2.49□□□□□ -2.013e-35■■□□□ 12.3
NUCKS1-202ENST00000464938 MAP3K14Q99558 947 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 PDCD2LQ9BRP1 358 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 PCGF6Q9BYE7 350 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 KRTAP3-1Q9BYR8 98 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 MANSC1Q9H8J5 431 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 ARNT2Q9HBZ2 717 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 PRDM11Q9NQV5 511 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 SLC52A1Q9NWF4 448 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 PPP4R1LQ9P1A2 415 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 DDX20Q9UHI6 824 aaKnown RBP2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 CNOT11Q9UKZ1 510 aaKnown RBP2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 OAZ3Q9UMX2 235 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 L1RE1Q9UN81 338 aa2.49□□□□□ -2.01
NUCKS1-202ENST00000464938 A0A088AWK7 358 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 UBE2QL1A1L167 161 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 NT5C1B-RDH14C9J2C7 533 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 MATN3O15232 486 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 LAMTOR5O43504 91 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 PRICKLE3O43900 615 aaPredicted RBP2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 PRAMEF4O60810 478 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 CAND2O75155 1236 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 UBXN7O94888 489 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 ZBED1O96006 694 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 PLATP00750 562 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 RPLP2P05387 115 aaKnown RBP2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 PCSK1P29120 753 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 CASRP41180 1078 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 FLT3LGP49771 235 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 GZMKP49863 264 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 CTXN1P60606 82 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 PURAQ00577 322 aaKnown RBP2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 DUSP2Q05923 314 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 SNAPC2Q13487 334 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 TBC1D10BQ4KMP7 808 aaPredicted RBP2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 METTL24Q5JXM2 366 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 DACT2Q5SW24 774 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 THEMIS2Q5TEJ8 643 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 Q6ZSN1 163 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 ARHGEF18Q6ZSZ5 1173 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 SEM1Q6ZVN7 128 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 NOL8Q76FK4 1167 aaKnown RBP2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 MIGA2Q7L4E1 593 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 DOK3Q7L591 496 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 SRGAP1Q7Z6B7 1085 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 DENND1CQ8IV53 801 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 GRAMD1CQ8IYS0 662 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 DCBLD1Q8N8Z6 715 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 ZBTB34Q8NCN2 500 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 SHCBP1Q8NEM2 672 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 REPS2Q8NFH8 660 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 DNERQ8NFT8 737 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 PLBD2Q8NHP8 589 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 PPP1R35Q8TAP8 253 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 CEP95Q96GE4 821 aa2.48□□□□□ -2.01
NUCKS1-202ENST00000464938 LRGUKQ96M69 825 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms